Lagenorhynchus albirostris (white-beaked dolphin): 132505537
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Entry
132505537 CDS
T10760
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04151
PI3K-Akt signaling pathway
lalb04510
Focal adhesion
lalb04512
ECM-receptor interaction
lalb04820
Cytoskeleton in muscle cells
lalb04974
Protein digestion and absorption
lalb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132505537 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132505537 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132505537 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132505537 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132505537 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132505537 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lalb00535
]
132505537 (COL9A3)
Proteoglycans [BR:
lalb00535
]
Extracellular matrix (ECM) proteoglycans
Others
132505537 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
132505537
NCBI-ProteinID:
XP_059979619
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Position
15:complement(1355191..1376160)
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AA seq
684 aa
AA seq
DB search
MAGAAALALLLLGQLLAATVTVTGAQKVGPRGPPGPRGPPGKPGKDGIDGEVGPPGLPGP
LGPKGAPGKPGKPGEAGMPGLPGVDGLTGHDGPPGPKGAPGERGSLGPPGPPGLGGKGLP
GPPGEAGVSGIPGGIGLRGPPGPSGLPGLPGPPGPPGPPGRPGVLPEGVTDLQCPAICPP
GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPPGIPGTVGLQGPRGLQGFPGPL
GPPGDRGPIGFRGPPGIPGAPGKVGDRGERGPEGLRGPKGDLGRPGPKGVPGMSGLVGEP
GMPGKDGRDGVLGLDGEKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGEPGRAGELGEA
GPSGEPGVPGDVGVPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGSMGDPGLPGPQ
GLRGGMGDRGSGGAAGPKGDQGIAGADGLPGDKGELGPSGPVGPKGESGSRGELGPKGIQ
GPNGTGGIDGVPGHPGPMGLQGVRGVPGITGKPGVPGKEASEQHIRELCVGMVSEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGPAGEGLDGPDGDQGLQGPQGVPGVGKDGRDGAHGEPGLPGDPGLPGAVGAQGTPG
ICDTSACQGAVIGGGGEKSGSRSS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccggagccgccgctctggccctgctcctgcttgggcagctgctggccgccaccgtg
accgtgaccggggcgcagaaagtgggacctcgaggcccccccggcccccgaggaccacct
gggaagccaggcaaggacggcattgatggagaagttggtcctccagggctgcctgggccc
ttgggaccgaaaggggccccggggaagccagggaaaccaggagaagccgggatgccggga
ctgcctggtgtggatggtctgaccgggcacgatggaccccctggacccaagggcgccccc
ggagaacggggaagtctgggacccccagggccacctgggctggggggcaaaggcctccct
ggaccccccggagaggcaggggtgagcggcatcccaggcggaattggcctccggggtccc
ccgggaccctctggacttccaggcctccctggccccccgggacctcccggcccccctggt
cgcccaggggtccttcccgaaggagttactgaccttcagtgcccggccatctgcccgcca
ggcccaccggggcccccaggaatgccagggttcaagggacccaccggctacaaaggggag
caaggagaagtcggcaaggatggcgagaagggtgaccccggcccccccgggccccctggc
atcccaggcaccgtggggctgcagggtccacggggcctacaagggtttccagggccacta
ggaccccccggggaccggggtcccatcggattccgagggccccccgggatcccaggagcc
cctgggaaagtgggtgacagaggcgagaggggcccagaggggttgcgcggccccaagggc
gacctcggcaggcctggtcctaaaggcgtccctggcatgtccgggctggtcggagagccg
ggcatgccgggcaaggatggccgggacggtgtgctgggactcgatggcgagaagggagaa
gctggtcgcaatggtgccccgggagagaagggtcccaatgggctgccgggtctccctgga
cgagcagggtccaagggtgagaaaggagaaccgggcagagctggagagctgggcgaggct
ggcccctcaggagagcccggtgtccccggagacgttggcgtgcccggggagcgtggcgag
gctggccacaggggctcagcgggggctctgggcccgcaaggcccccccggagcccctggt
gtccgcggtttccagggccggaagggcagcatgggagaccctggcctgcccggccctcaa
ggcctccgaggcggcatgggcgaccggggctcgggaggagctgcaggcccaaagggcgac
cagggcatcgcgggcgccgacggccttcctggggataaaggagaactgggtcccagtggc
cctgtcggacccaaaggagagtccggcagtcgaggggagctgggtcccaagggcatccag
ggccccaatggcaccggcggcatagacggcgtcccgggccaccctggccccatgggcctc
cagggcgtgcgaggagtgcccggcattactgggaaacccggagtcccgggcaaagaagcc
agcgagcagcacatcagagagctgtgtgtggggatggtcagcgagcaaatcgcacagcta
gccgcgcacttgaggaagcccttagcaccagggtccatcggtcggccgggtcccgctggc
ccccccggccccccggggcccccaggctccattggtcaccccggggctcgagggccccct
ggataccgcggtcccaccggagagctgggagaccccggacccagaggaaaccagggggac
agaggagacaaaggcccagctggcgagggcctggacgggcctgacggagaccaagggctc
caaggaccgcaaggtgtgcccggtgttggcaaagatggccgcgacggggcccacggagag
cctgggctccctggtgatcctggccttcccggtgctgttggcgctcaggggacccccggc
atttgcgacacctccgcctgccaaggagccgtgattggagggggcggggaaaaatcaggt
tccaggagctcctaa
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