Lagenorhynchus albirostris (white-beaked dolphin): 132506004
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Entry
132506004 CDS
T10760
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04120
Ubiquitin mediated proteolysis
lalb04137
Mitophagy - animal
lalb04144
Endocytosis
lalb04340
Hedgehog signaling pathway
lalb04350
TGF-beta signaling pathway
lalb04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132506004 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132506004 (SMURF1)
04350 TGF-beta signaling pathway
132506004 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132506004 (SMURF1)
04137 Mitophagy - animal
132506004 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
132506004 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lalb04131
]
132506004 (SMURF1)
04121 Ubiquitin system [BR:
lalb04121
]
132506004 (SMURF1)
03029 Mitochondrial biogenesis [BR:
lalb03029
]
132506004 (SMURF1)
Enzymes [BR:
lalb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132506004 (SMURF1)
Membrane trafficking [BR:
lalb04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132506004 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
132506004 (SMURF1)
Ubiquitin system [BR:
lalb04121
]
Ubiquitin ligases (E3)
HECT type E3
132506004 (SMURF1)
Mitochondrial biogenesis [BR:
lalb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132506004 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
132506004
NCBI-ProteinID:
XP_059980344
LinkDB
All DBs
Position
15:82040331..82150221
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTAYEDSGPGRPLSCFMEEPA
PYTDGTGAAAGGGGCRSVESPSQDQRLQAQRLRSPEVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPSEGSVEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLDDWKSNTRLKHCGADSNVVRWFWQAVETFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccgggacgcgcaggaacggctccagcatcaagatccgtctgacagtatta
tgtgccaagaaccttgcaaagaaagacttcttcagactccctgacccttttgcaaagatc
gttgtggatggatctgggcagtgccactcaacggacactgtgaagaacacgttggaccca
aagtggaaccagcactacgatctatatgttgggaaaacggattctataaccatcagcgtg
tggaaccacaagaaaattcacaagaagcagggagctggcttcctggggtgcgtgcggctg
ctctccaatgccatcagcagattaaaagatactggataccagcgtttggatctatgcaaa
ctaaacccctcagatactgatgcagttcgtggccaaatagtggtcagtttacagacacga
gacagaataggcactggagggtccgtggtagactgcagagggctgttagaaaatgaagga
actgcgtacgaagactcagggccgggaaggccactcagctgcttcatggaggaaccagcc
ccttacacggatggcactggggcggctgctggcgggggtggctgcaggtctgtggaatcc
ccgagtcaagatcaaagacttcaggcccagcggctgcgaagtcctgaggtccgagggtca
ctccagacgccgcagaaccgacctcacggccaccagtccccggaactgcccgaaggctac
gaacagagaacaacggtgcaggggcaggtttacttcctgcacacgcagactggagttagc
acgtggcacgaccccaggatacccagagaccttaacagcgtgaactgtgatgaacttgga
ccactgccacccggttgggaagtccgaagtacagtttccgggagaatatattttgtagat
cataataaccgaacaacccagtttacagacccaaggttacaccacatcatgaatcaccag
tgccaactaaaggagcccagccagccgctgccactgcccagtgagggctccgtggaagac
gaggagcttcccgcccagagatatgagagagatttagtccagaaactgaaggtcctcaga
cacgagctctcgcttcagcaaccccaagctggtcactgccgcatcgaagtatccagagag
gaaatatttgaggagtcttatcgccagataatgaagatgcgaccgaaagacttgaaaaag
cgactgatggtgaaattccgaggagaagaaggtttggactatggcggggtggcgagggag
tggctttacttattgtgccatgagatgttgaatccgtattatggactcttccagtattcc
acggacaacatttacatgttgcaaatcaatcccgattcttccatcaaccctgaccacttg
tcttatttccattttgtgggtcggatcatgggtctggctgtgttccatggacactacata
aacgggggtttcacggttcccttctacaagcagctgctggggaaacccatccagctttct
gacttggagtcggtggacccggaacttcataagagcctagtgtggattctagagaacgac
atcacccccgtgctggaccacacgttctgtgtggagcacaacgctttcgggaggattctt
cagcatgaactgaaacctaacggcaggaatgtccctgtcacagaggagaacaagaaagaa
tacgtccggttatatgtaaattggaggtttatgaggggtattgaggcccagttcctggct
cttcagaaggggtttaatgaactcatccctcaacacttactgaagccttttgaccagaag
gagctggagctgatcatcggcggcctggacaagatcgacctggacgactggaagtccaac
acgcggctgaagcactgcggggccgacagcaacgtggtccggtggttttggcaggcggtg
gagaccttcgacgaggagaggagggcccggctgctgcagttcgtgacgggctccacgcgg
gtccccctccagggcttcaaggcgctgcaaggctctacaggcgccgcagggccgcggctg
ttcaccatccacctgatcgacgcgaacacagacaacctgcccaaggcccacacctgcttt
aaccggatcgacattccaccctacgagtcatatgagaagctctatgagaagctgctgaca
gcagtggaggagacctgtgggtttgctgtggagtga
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integrated database retrieval system
