Lagenorhynchus albirostris (white-beaked dolphin): 132506173
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Entry
132506173 CDS
T10760
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132506173 (TNRC6A)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132506173 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
132506173
NCBI-ProteinID:
XP_059980676
LinkDB
All DBs
Position
15:68498505..68595726
Genome browser
AA seq
1943 aa
AA seq
DB search
MRELEAKATKDAERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNQPPPQPPPQPQQPPQPQPPQALPRYPRE
VPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQNNGEVQISKTQ
SDINHNTSGSHYENSQRGPVSSTSDSSTNCKNAVVNDSPEKEAWPSVPGSDLELASECVD
ADSASSSESERNITIMASGSTGGENDGLRNSTGLGSQNKFVVGSSSNNVGHGSSTGPWGF
SHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLEN
NGLALKGPVGSGSSGINIQCSTLGQMPNNQSINSKVGGSSTHGTWGSLQETCESEVSGTQ
KVSFSGQPQNITTEMTGPNNTTNFVTSSLPNSGSVQNNELPSNTGAWRVSTMNHPQIQAP
SVVNGTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCSSPNGQANGDTVNATLMQPGIN
GPMGTNFQVNTNKGGGVWESGAVNSQSASWGNGANSGGSRRGWGTPAQNTGTNIPSVEWS
KLPSNQHSSDSANGNGKKFTNGWKSTEEEDQGSATSQTNEQNSVWAKTGGTVESEGSTES
TGRLEEKVTGENQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTET
SPRGERKTDNGTEAWGSSATQTFNSGACTDKTSPSSNDTSSVSGWGDPKPTLRWGDSKGS
NCQGGWEDDSAATGMAKSNQWGNCKEEKSAWNDSQKNKQGWGDGQKSNQGWSVSASDNWG
ETSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDESSKPNP
SQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDVGSWGIPSATGKPPGTGWLGGPIPAPT
KEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGSSRSDQQAQV
HQLLPSASAISNKEASSGSGWGEPWGETSTPATTVDNGTSAWGKPIDSGPSWGEPIAAAS
STSTWGSSSAGPQALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWNSNSSQE
LNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAWINPFVKQFSNISFSRDSPE
ENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSMERSPYFDK
DGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNPSMFGVGN
TAAQPRGLQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVA
MLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQMMQPSRQ
LDPNLLVKQQTPPSQQQSLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFPIGLNSNL
NVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYDFMNS
STSPASPPGSVGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVIN
NLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSARNSDS
KLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRVGGGWG
NSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNA
LVRYSSKEEVVKAQKSLHMCVLGNTTILAELASEEEISRFFAQSQSLTPSPSWQSLGSSQ
SRLGSLDCSHSFSSRADLNHWNGAGLSGANCGELHGTSLWGTPHYSTSLWGPPSSSDPRG
ISSPSPINAFLSVDHLGGGGESM
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgcagaaagaaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatcagccgccgccgcagccgccgcca
cagccacagcagccgccgcagccgcagccaccacaggccttgcctcggtatccgcgcgaa
gttccacctcgatttcgccaccaggaacataagcagcttctaaagaggggtcagcatttt
cctgtcatagcagcaaacctgggatctgctgttaaagtgttaagcagccagtcagagagc
agtgctttaacaaatcaacagccacaaaataacggagaggtgcagatcagcaaaacccag
tcagatataaaccacaatacttcaggatcccattatgaaaattcgcagcggggacctgtg
tcttctacaagtgactctagcacaaactgtaagaatgctgttgtaaacgactcacctgaa
aaagaagcatggccctcagtccctggcagtgatctagagttggcttcagaatgtgtggat
gctgattctgcctccagttctgaatcagagagaaacatcactatcatggcttcagggagc
acaggtggtgaaaatgatggccttcggaatagcactggacttggatcccaaaacaagttt
gtggttggtagcagcagcaataatgtgggccatggaagtagtactgggccatggggtttt
tcccatggagccataataagcacatgtcaggtctctgtggatgctcctgaaagcaaatca
gaaagtagcaacaatagaatgaatgcttggggcactgtaagttcttcatcaaatggaggg
ttaaatccaagcactttgaattcagctagcaaccatggtgcctggccagtgttagagaac
aacggacttgccctaaaagggcctgtagggagtggtagttctggcatcaatattcagtgc
agtaccttaggccagatgcctaacaatcagagtattaactctaaagtgggtggttcttct
acccatggtacctggggaagccttcaggaaacttgtgaatctgaagtaagtggtacacag
aaggtttcattcagtggtcaacctcaaaatattaccactgaaatgactggaccaaataac
actactaactttgtgacctctagtttaccaaactccggttcagtacagaataatgagctg
cctagtaatacaggggcctggcgtgtgagcacaatgaatcatcctcagatacaggctccg
tcggttgtaaatggcacttccctttctcaccttagcaatggagagtcaaaaagtggaggc
tcttatggtactacatggggtgcctatggttctaattactctggagacaaatgttcaagc
cctaatggccaagctaatggtgacactgtgaatgcaactctaatgcagcctggcataaat
gggcctatgggcactaactttcaagttaacacaaataaaggaggaggtgtgtgggagtct
ggggcagtgaattcccagagtgcatcatggggaaatggtgcaaattctggaggaagtcga
agaggatggggaactcctgcacaaaacactggcactaatatacccagcgtggaatggagc
aaactgcctagcaatcagcattccagtgacagtgcaaatggcaatggtaagaagtttaca
aacggatggaaatctactgaggaagaggatcagggttctgccacatctcagacaaatgag
caaaacagtgtgtgggccaaaacgggaggtacagtggagagtgaaggtagtacagaaagc
actggacgccttgaggaaaaagtaactggggaaaatcagagtagagatagaagaaaaatc
gatcagcacacattactccaaagcattgtaaacagaactgacttagatccacgtgtccta
tccaactctggttggggacagactcctattaagcagaatactgcctgggataccgaaaca
tcacctagaggggaaagaaagactgacaatgggacagaggcctggggaagctctgcaaca
cagacttttaactcaggggcatgtacagataagactagccctagtagtaatgatacctca
tctgtatcggggtggggagatcccaaacctactctgaggtggggagattccaaaggctca
aactgccaggggggatgggaagatgattctgctgctacaggaatggccaagagcaatcag
tgggggaattgcaaagaagagaagtctgcatggaatgattcgcaaaagaacaaacaggga
tggggtgatggacaaaaatcaaaccaaggttggtccgtttctgccagtgataactgggga
gaaacttcaaggagtaaccattggggtgaggctaataagaaatctagctcaggaggtagt
gacagtgataggtccgtttctggttggaacgaacttggtaaaactagttcttttacttgg
ggaaataacataaatccaaataattcatcaggatgggatgaatcttctaaaccgaatcct
tcccagggatggggagatcctccaaagtctaatcagtctctaggttggggagattcgtca
aagccagtcagttctccagactggaacaagcaacaagatgtcggatcttggggaatccca
tcagctacaggcaaacctcctggtacaggctggctgggaggacctataccagccccaaca
aaagaagaagagcccacgggctgggaggaaccatccccagaatccatacgtcgcaaaatg
gagatcgatgatggaacttcagcttggggagatccaagcaaatacaactacaaaaatgtg
aacatgtggaacaaaaatgtcccaaacggcagcagccgttcagaccagcaagcacaggta
catcagctgctgccgtctgcaagtgccatctcaaacaaggaggcgagcagtggctctggc
tggggtgagccctggggtgagacttctactccagccacaactgtggataatggcacttca
gcatggggtaaacccatagacagtggccccagctggggcgaacccattgctgcggcatcc
agcacatccacgtggggctccagctctgctggtccacaagcattaagcaaatctgggcca
aaatctatgcaagatggctggtgtggtgatgatatgccattgcctggaaatcgccccact
ggctgggaagaggaagaggatgtagagattggaatgtggaatagtaattcatctcaagag
cttaattcatctttaaattggccaccatatacaaagaaaatgtcgtcgaagggtctgagt
ggcaaaaaaaggagaagggaaaggggaatgatgaaaggtggaaacaaacaagaagaagca
tggataaatccatttgttaaacagttttcaaatatcagtttttcgagagactcaccagaa
gaaaatgtacagagcaataagatggacctttctggaggaatgttacaagacaaacgaatg
gagatagataaacatagcctaaatattggtgattacaatcgaacggtcgggaaaggccct
ggttctcggcctcagatttccaaagagtcttccatggagcgcagtccttattttgataag
gatggcattgtagcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaag
cttcccccttcaaatagtgcactacctaaccaggcccttggctccatagcagggctgggt
atgcaaaacttgaattctgttagacagaatggcaatcccagtatgtttggtgttggaaac
acagcagcacaaccccggggcctgcagcagcctccagcacaacctctcagttcatctcag
cctaatctccgtgctcaagtgcctcctccattactctcccctcaggttccagtttcattg
ctgaagtatgcaccaaacaacggtggcctgaatccgctctttggccctcagcaggtagcc
atgctgaaccagctatcccaactaaaccagctttctcagatctcccagttacagcgattg
ttagcgcagcagcaaagggcgcagagtcagagaagcgtgccttctgggaaccggcagcag
caagaccagcagggtcgacctcttagtgtgcagcagcagatgatgcagccgtctcgtcaa
cttgatccaaacctgctggtgaagcaacagactccgccatctcagcagcagtcactccat
cagccagccatgaaatctttccttgaaaatgtcatgccccacactacacctgagctgcaa
aaagggccatcaccaataaatgctttcagcaacttccccataggcttgaactcaaacttg
aatgtaaatatggatatgaacagtattaaagagccacagtcaagactaaggaagtggact
acagtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacatggtgct
atttcaagtggtttcaggctggaagagtctccatttgttccctatgactttatgaacagc
agtacttcaccagccagtcctccgggttcagtaggagatggctggccacgtgccaaatcg
cctaacggctctagcagtgttaattggccaccagaatttcgccctggtgaaccatggaaa
ggttatccaaacattgaccctgaaactgacccttatgtcactcctggcagtgtcataaac
aatctttcaattaatactgtgcgggaagtcgaccacctcagggacaggaacagtgggtca
tcctcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctcc
aactacaacgttcccctcagcagtacagcacaaagcacttcagccagaaatagtgattcc
aaattgacatggtctcctggttcagttacaaacacctctctggctcatgagctgtggaag
gtccctttgccacctaaaaacatcactgctccgtcccgcccacctccgggactgactggt
cagaagccacccttgtctacgtgggataattctccccttcgtgtaggtggaggatgggga
aattctgacgccaggtataccccaggttccagctggggtgagagcagctcagggagaata
acaaattggcttgttctgaaaaaccttacacctcagattgacggctcaactctgcgcact
ctgtgcatgcagcatggcccactgatcacattccacctgaacctcccgcatggaaatgct
ttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgt
gtactggggaacactactattcttgctgagcttgccagtgaagaggagatcagtcgtttc
tttgcacaaagtcagtctctgaccccttctcccagctggcagtccctcgggtccagccag
agccggctgggctccctcgactgttcccactccttctccagccgggccgatctcaatcac
tggaatggtgctgggctgtcgggagccaactgtggagagcttcacggcacttccctctgg
gggaccccacattattccacaagcttgtggggtcccccaagcagcagcgacccccgggga
attagcagcccgtcccccattaacgcttttctttctgttgaccacctgggtgggggtgga
gagtccatgtaa
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