Lagenorhynchus albirostris (white-beaked dolphin): 132506349
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Entry
132506349 CDS
T10760
Name
(RefSeq) MHC class II transactivator-like isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04612
Antigen processing and presentation
lalb05145
Toxoplasmosis
lalb05152
Tuberculosis
lalb05164
Influenza A
lalb05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
132506349
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
132506349
09171 Infectious disease: bacterial
05152 Tuberculosis
132506349
09174 Infectious disease: parasitic
05145 Toxoplasmosis
132506349
09163 Immune disease
05340 Primary immunodeficiency
132506349
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lalb01001
]
132506349
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lalb04054
]
132506349
Enzymes [BR:
lalb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132506349
Protein kinases [BR:
lalb01001
]
Serine/threonine kinases: Other
TAF1 family
132506349
Pattern recognition receptors [BR:
lalb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
132506349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
132506349
NCBI-ProteinID:
XP_059980895
LinkDB
All DBs
Position
15:58297278..58336619
Genome browser
AA seq
1129 aa
AA seq
DB search
MRCLATRPAGSYLPEPQGSGQHTTMELGPLEGGYLELLNNNADPLHLYHLYDRMDLAGEE
ELELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFI
EHIGLEEMISESVEVLEEAGQKSQKRPFPEELPVDLKHRKLAEPLAMPVVTGAFLVGLVS
DSSAQPCPSPPALFNKEPAPSQTRLEDTVPPSSSLLSCLSLPAGPIQIIPTLSTLPQGLW
QISGAGTGVSSILIYQGEMPQASQTPATSSTAVHSLPKSPDRPGSTSPFAPSAADLPSMP
EPALTSRTNLTEDEMSPTQCPAAHEASSKLPKWPESVEQFYCSLRNKYQAKPAGPEGILV
EVDLVRVRLERSGGKSQDRELTTLDWAERQPARGSLGEVLLASSNHRQPRETQVIAVLGK
AGQGKSHWVQAVSWAWACGQLPQYDFIFCIPCHCLDRPGDTYRLQDLLFSLGSQPLSVDD
EVFSYILRRPDRILLILDAFEELEAQDGFLHSAGGPTSAEARSLRGLLAGLFQRKLLRGC
TLLLTARPRGRLAQSLSKADALFEVAGFSAQQAETYVMRYFECSGTTEHQKRALALLQSQ
PFLLSHSHSPTVCRAVCRLLEALLELGDEAQLPSTLTGLYVGLLGPGARDSPPGALVGLA
RLAWELGRGHQSSLREGQFPSAEVRVWAVAQGLVQPTPGAPETKLAFSSFLLQCFLGAVW
LALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRACCLGALAGLAGSTS
AVRKQEVLTRYLKRLQPGALKAGRLLELLHCAHEALDAGLWQHVLQGLPAHLSFLGTRLT
PPDTYVLGSALEAAGRDFSLDLRSTGVDPSGLGSLVGLSCVTHFRAALSDTVELWESLQQ
HGEAKLLRAVKEKFTIEPFKAESMKDVEDLGNLVQIQRTRSSSEDTPGELPAIRDLKKLE
FALGPILGPQAFPKLVKILEAFSSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLN
LSQNNITDLGACKLAEALPLLAASLLRLSLYNNCICDVGAESLAHVLPDMVSLRVLDVQY
NKFTAAGAQQLTASLRKCPHVEKLAMWTPTIPFGVQEHLQQLDSRIILR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctacgcgcccagccgggtcctacctgccagagccccaaggcagtgga
cagcacacaaccatggagttggggcctctagaaggtgggtacctggagcttctcaacaac
aatgctgaccctttgcatctctaccacctctatgaccggatggacctggctggagaagaa
gagctagagctctgctcagaacctgatacggacaccatcaactgcgaacagttcagcagg
ctgttgtgtgatatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaa
ctggaccagtatgtcttccaggattcccagctggagggcctgagcaaagacattttcatc
gagcacataggactggaagaaatgatcagcgagagtgtggaggtgctggaggaagcagga
cagaaaagtcagaaaagacccttcccagaggagctgcctgtggatctgaagcacaggaag
ctagctgagcccctagccatgcccgtggtgactggtgctttcctggtggggctagtgagt
gactcttcagctcagccctgcccatcaccacctgctctgttcaacaaggagccagcaccc
agccagacccggctggaggacaccgtgcccccttccagttccttgttgagctgcctgagt
ctccctgctggacccatccagatcatccccactctctccactctgccccaggggctctgg
caaatctcaggggctgggacaggggtctccagtatactcatctaccaaggtgagatgccc
caggccagccaaacacccgccaccagcagcacagctgtccacagcctcccaaagtcccca
gaccggcccggctccaccagcccctttgccccatcggcagctgacctccccagcatgcct
gaaccagccctgacctcccgtacaaacctaacagaggatgagatgtcccccacccaatgc
ccagcagctcacgaggcatccagcaagcttcccaagtggcctgagagtgtggaacaattc
tactgctcgctacggaacaagtaccaggctaagcccgcaggcccggaaggcatcctggtg
gaggtggacctggtgagggtaaggctggagaggagcggcggcaaaagccaggacagagag
ctgaccaccctggactgggcagagcggcagccggcccgaggaagtctgggcgaggtgctg
ctggcctctagcaaccaccggcagccacgtgagacgcaggtgatcgctgtgctgggcaaa
gcaggacaggggaagagtcactgggtccaggccgtgagctgggcctgggcctgcggccag
ctgccacagtacgactttatcttctgcatcccctgccactgtttggaccgtccgggggac
acctaccgcctgcaggatctgctcttctccctgggttcacagccactgtcagtggacgac
gaggtcttcagttacatcttgaggaggcccgaccgcattctgctcatcctggatgccttc
gaggagctcgaagcccaagacggcttcctgcacagtgcgggcggacccacgtcagcagaa
gcccgctccctccgggggctgctggcgggcctcttccagcgcaagctgctgagaggctgc
accctgctgcttacagcccggccccggggccgcctggcccagagcctgagcaaggccgac
gctctgttcgaagtggccggcttctccgcccagcaggccgagacctatgtgatgcgctac
tttgagtgttcggggaccaccgagcaccaaaagagagccctggcgctcctccagtcccag
ccatttctcctgagtcacagccatagccccactgtgtgccgggccgtgtgccggctcttg
gaggccctcctggagctaggtgatgaggcccagctgccttccacgctcacgggactctat
gttggcttactaggcccaggagcccgtgacagccccccaggggccctggtgggactggcc
aggctggcctgggagctgggccgcggtcaccagagcagcctgcgggagggccagttccca
tcggccgaggtgagggtctgggctgtggcccaaggcttggtgcagcccaccccgggggcc
ccggagaccaagctggccttctccagcttcctcctgcaatgcttcctgggggctgtgtgg
ctggctctgagcagcgaaatcaaggacaaggagctgccgcagtatttggcattgaccccg
aggaagaagaggccctatgacaactggctggagggcgtgccgcgctttctggtcgggctg
gtcttccagcctcgtgcctgctgcctgggagccctggcagggctggcgggctccacctca
gcggtcagaaagcaggaggtgctcaccaggtacctgaagcggctgcagcctggggcgctg
aaggcggggcggctgctggagctgctgcactgcgcccacgaggcactggatgccgggctt
tggcagcatgtactgcaggggctcccggcccacctctcgttcctgggcacccggctcaca
cctcccgacacctacgtgctgggcagcgccttggaggcggcgggccgagacttctccctg
gacctccgcagcactggtgttgacccctctggactggggagcctcgtgggactcagctgt
gtcacccatttcagggctgccttgagtgacacagtggagctgtgggagtccctacagcag
catggggaggccaagttactccgagcagtgaaggagaagttcaccattgagcctttcaag
gctgaatccatgaaggatgtggaagacctaggcaacctcgtgcagatccagaggacaaga
agttcctctgaagacacgcctggggaactccctgccatccgagacttaaagaagctggag
tttgcgctgggccccatcttgggccctcaggcttttcccaaactggtgaagatccttgag
gccttttcttcccttcagcatctggacctggactcactgagtgagaacaagatcggggat
gagggtgtcgcccagctctcggccaccttccctcagctgaaggccctggagacgctcaat
ttgtcccagaacaatatcactgacttgggtgcctgcaagctggcggaggccctgcccttg
ctggctgcgtccctcctcaggctgagcttgtacaataactgcatctgcgatgtgggagct
gagagcctggcacacgtgcttccagacatggtgtccctccgggtgctggatgtccagtac
aacaagttcacagctgccggggcccagcagctcactgccagcctgagaaagtgccctcac
gtggagaagctggcgatgtggacgcccaccatcccttttggcgtccaggaacacctgcag
cagctggactcaaggatcatcctgagatga
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