Lagenorhynchus albirostris (white-beaked dolphin): 132506533
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Entry
132506533 CDS
T10760
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03008
Ribosome biogenesis in eukaryotes
lalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132506533 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
132506533 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalb03021
]
132506533 (XRN2)
03019 Messenger RNA biogenesis [BR:
lalb03019
]
132506533 (XRN2)
03009 Ribosome biogenesis [BR:
lalb03009
]
132506533 (XRN2)
03016 Transfer RNA biogenesis [BR:
lalb03016
]
132506533 (XRN2)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132506533 (XRN2)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
132506533 (XRN2)
Ribosome biogenesis [BR:
lalb03009
]
Eukaryotic type
Pre-60S particles
RNases
132506533 (XRN2)
Transfer RNA biogenesis [BR:
lalb03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
132506533 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
132506533
NCBI-ProteinID:
XP_059981256
LinkDB
All DBs
Position
15:complement(45738260..45818329)
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECSGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVKEEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPSFSPGGILTPHALGSRNSPGSQVAHNPRQAAYEMRMQNNSSPSVSPNASF
TSDGSPSPRGGIKRKVEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMASDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAVDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFLLELYKTGSTESVDVPPELCHGIQG
KFSLDEEAILPDQIVCSPVPMLRDLTQNAAISINFKDPQFAEDYVFKAIMLPGARKPAPV
LKPGDWEKSSNGRQWKPQLGFNRDRRPVHLDPAAFRALGHVMPRGSGTGVYSNAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTP
NAAFQPNQYQMLAGPGGYAPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggctttctttcgctggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcagtggtgtaaagatccctgtggatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccgaaaaacgaggatgaaatgatggttgca
atctttgagtacattgacaggcttttcaatattgtaagaccaagacggcttctgtacatg
gcaatagacggagtggcgccacgcgctaaaatgaaccagcagcgttcaaggaggttccga
gcatccaaagaaggaatggaagcagcagtagagaagcagcgagtcaaggaagaaatactg
gcaaaaggtggctttcttcctccagaagaaataaaggaaagatttgacagcaactgcatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgacccagggtggaaaaatttgacagttattttatctgatgctagtgct
cctggtgaaggggaacataaaatcatggattacattagaagacaaagagcccagcctaac
cacgacccaaacactcatcattgcttatgtggagcagatgctgatctcattatgctcggc
cttgctacacatgagcccaactttaccattatcagagaagaattcaaaccaaacaaaccc
aaaccctgtggtctttgtaatcagttcggacatgaggtcaaagactgtgaaggtttgccg
agagaaaagaagggaaagcacgatgaactggcagacagtcttccttgtgcagaaggagag
tttatcttccttcgtctcagtgttcttcgtgagtatttggaaagagagctcaccatggcc
agcctgccattcacatttgatgttgagaggagcattgatgactgggtcttcatgtgcttc
tttgtgggaaatgacttccttcctcacctgccgtccttagagattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcagagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccatctttctctcctggtggaatattaacccct
catgcccttggttcaagaaactcaccaggatctcaagtagcccataatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcagtgtctcctaatgcgagtttc
acttctgatggctccccatctccgagaggaggaattaagcgaaaagtggaagacagtgac
agtgaacctgagccagaggataacgtcaggttatgggaagctggttggaaacagcggtac
tacaaaaacaaatttgatgttgatgcagctgatgagaaattccgacgtaaagttgtgcag
tcctacgttgaaggactctgctgggttcttcgatattattaccagggttgtgcgtcctgg
aagtggtattatccattccattatgcaccattcgcttcagactttgaaggtattgcagat
atggcttctgattttgagaagggtaccaaaccgtttaaaccactggaacaacttatgggg
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cccgattctagtataattgacttctacccagaagattttgctgttgatttgaatgggaag
aagtatgcatggcaaggtgtggctctgttgccgttcgtggatgagcgaagactgcgagct
gccctggaagaggtgtacccggacctcacccctgaagagactagaagaaacagtcttgga
ggtgatgtcttatttgtggggaaacatcacccactgcacgacttccttttagagctgtac
aagacaggttccacagagtcagtggatgtaccacctgaactatgccatgggattcaagga
aagttttctttggatgaagaagccattcttccagatcaaatagtatgttctcctgttccc
atgttaagggatctgacacagaacgctgcgatcagtattaattttaaagacccacagttt
gctgaagattacgtttttaaagccataatgcttccgggagcaagaaaacctgcaccggta
ctgaaacctggcgactgggagaagtccagcaatgggcggcagtggaagccccagctcggc
tttaaccgggaccggcggcccgtccacctggatccagcggcctttagggctttgggccat
gttatgcccagaggctctggaactggagtttacagcaatgctgcaccaccacctgcgact
taccagggaaacttgtaccggccactgttgagaggacaagcccagattccaaagcttatg
tcaaatatgaggccccaggattcctggcgaggtcctcctccccttttccagcagcaaaga
tttgacagaggcgttggggccgaacctctgctgccatggaaccggatgctccaaacccca
aacgcagccttccagccaaaccagtaccagatgctcgccgggccgggcgggtatgcaccc
agacgtgatgatcgcggcgggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccttcaggaagatacagttggaattag
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