Lagenorhynchus albirostris (white-beaked dolphin): 132506799
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Entry
132506799 CDS
T10760
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132506799 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalb03019
]
132506799 (EXOSC1)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132506799 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
132506799 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
132506799
NCBI-ProteinID:
XP_059981481
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All DBs
Position
16:complement(54076824..54082923)
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AA seq
195 aa
AA seq
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MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLIKSSENGALPVISVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcatccccggcgaacgtctgtgtaacttggaagagggc
agccccggcagcggcacctacacccggcatggctacatcttttcgtcgcttgctggctgc
ctgataaagagcagcgagaacggcgcgcttcctgtcatatctgtgatgagagaaacagag
tcccaattactgccagatgtgggagctattgtaacctgtaaggtctctagcatcaattca
cgctttgccaaagtacacatcctatatgtggggtccacaccgcttaagaactcttttcga
ggaactatccgcaaggaagacgtccgagctactgaaaaagacaaggttgaaatttataag
agtttccgcccaggggacattgtcttggccaaagtgatctccctaggtgatgcgcagtcc
aactacctcctaaccactgctgaaaatgagctgggagtggtggtggcccacagtgaatcg
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggcccgagtacagcctgaattcttacagacctaa
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