Lagenorhynchus albirostris (white-beaked dolphin): 132506821
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Entry
132506821 CDS
T10760
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lalb03016
]
132506821 (TRUB1)
Enzymes [BR:
lalb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
132506821 (TRUB1)
Transfer RNA biogenesis [BR:
lalb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132506821 (TRUB1)
Prokaryotic type
132506821 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
132506821
NCBI-ProteinID:
XP_059981535
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All DBs
Position
16:68918414..68948719
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AA seq
348 aa
AA seq
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MAAAEAAVVSSSSLSPDTTPVPESAGMAAATAATSSAMAAAAAVAARTGSEARVSKPALA
TKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDS
AARGVLVVGIGRGTKLLTSMLSGSKRYIATGELGKATDTLDSTGKVTEEKPYDKITQEDI
EGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQPPF
FTLDVECGGGFYIRSLVSDIGRELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDIAQ
SLEQCSSLLPAETALKKSKPEESNEPVLSCEYITLNEIKGEDDVIKTF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtatcgtcgtcatccttgagcccagatacaacccca
gtccccgaaagtgcaggaatggctgcagccacggccgccacatcctcagcgatggctgca
gccgcggcggttgcggccaggaccggatccgaagccagggtctccaagcccgcgttggct
actaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggcccacttca
gccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgccttctcca
gaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggactctagacagt
gcagcccgaggagtcctggtggttggaattggaaggggaacaaaactgttgaccagtatg
ttgtcagggtccaagaggtatattgccactggtgaactggggaaagctactgacacgcta
gattctacagggaaagtaacagaagaaaaaccttacgataaaataacacaggaagatatt
gaaggcattctacagaaatttactgggaatataatgcaagtacctcctctctattctgca
ttaaagaaagatggacagagactttcaactttgatgaagagaggtgaagtagtagaagca
aaacctgccaggccagttaccgtgtacagtctttcccttcaaaaattccagccaccattt
ttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgacatt
ggcagagaactgtcttcctgtgccaatgtgctagagctgacccgcaccaaacagggaccc
tttacactggaggagcacgcccttcccgaagacaaatggacaattgacgacattgcacag
tctcttgagcagtgctcatcccttctcccagcagagacggcacttaaaaaatcaaaacct
gaggagtctaatgagccagttttgagctgtgagtacataactctaaatgagataaaggga
gaagatgatgtgattaagacattttaa
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