Lagenorhynchus albirostris (white-beaked dolphin): 132506840
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Entry
132506840 CDS
T10760
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132506840 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalb03021
]
132506840 (TAF5L)
03036 Chromosome and associated proteins [BR:
lalb03036
]
132506840 (TAF5L)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132506840 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
132506840 (TAF5L)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132506840 (TAF5L)
STAGA complex
132506840 (TAF5L)
TFTC complex
132506840 (TAF5L)
SAGA complex
132506840 (TAF5L)
SLIK complex
132506840 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
RMC1_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_EIPR1
WD40_RFWD3
PROPPIN
PEP5_VPS11_N
WD40_like
eIF2A
Nbas_N
Beta-prop_IP5PC_F
WD_LRWD1
Ge1_WD40
Mala_s_1-like
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
132506840
NCBI-ProteinID:
XP_059981575
LinkDB
All DBs
Position
16:complement(1834938..1861054)
Genome browser
AA seq
676 aa
AA seq
DB search
MACVEISSESIKCCIIDDLVGAKMVCSGKWNLMIQSGFSDYRDTGVEDAIEKSIFRLCFK
RVTMNQFGRIIYLQMILEQLVCCSIWVMKRVRTEQIQMAVSCYLKRRQYGDADGSLKQGL
RLSQSAEEMATSLAVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSESQHSHEVM
PLLYPLFVYLHLSLVQSSPKSTAESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNF
RLRAFLDNKYVVRLQEDSYNYLLRYLQSDNNTALCRVLTWHIHLDVQPAKRTDYQLYASG
GPSRGEGGGLEPADVPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNT
AEVSPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEKEDNEDDNAGT
EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS
PHSLYFASGSHDRTARLWSFDRTHPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW
STQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI
TSLTFSPDSSLIASASMDNSVRIWDIRSAHCSAPADGSSSELVGVYTGQMSNVLSVQFMA
CNLLLVTGITQENQEH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgttgagatttccagcgagagcatcaagtgctgtatcatagatgatttggta
ggagcgaagatggtgtgttctggaaaatggaatttgatgattcagagtggcttcagtgac
tacagagacactggtgttgaagatgcaattgaaaagtcgatcttcagattgtgttttaaa
agagttaccatgaatcagtttggaaggattatttatttgcagatgattctggaacaactt
gtttgctgcagtatctgggtcatgaaacgggtgcgcaccgagcagattcagatggccgtg
tcctgctacctcaaacgccggcagtacggggacgcagacggctcactgaagcaaggcctg
cggctgtcgcagagcgccgaggagatggccaccagcctcgcagtccaatcagaatctggt
tgtgccaacatagtgtctgcggccccttgccaggcagagccccagcaatatgaagtgcag
ttcggacggctgcggaatttcctcaccgattctgaatcccagcacagccatgaagtgatg
cctctcctctaccccctctttgtctacctccacctcagcctggtccagagcagtcccaag
agcacggcggaaagcttttacagccgcttccatggaatgtttctgcagaatgccagccag
aaggacgtcatcgagcagctgcagaccacccagaccatccaggacatcctgtctaacttc
cggctgcgggccttcctggacaacaagtacgtggtccgcctgcaggaagacagctacaac
taccttctccgctacctccagagtgacaataacaccgcgctgtgcagagtcctcacctgg
cacatccacctggatgtgcagcccgccaagaggacggactaccagctctacgccagcggc
ggcccctcccggggcgagggcggcggcctggagcctgccgacgtgcccgcgcccatcctg
cagaacgaggccgcgctggaggtcctgcaggagagcattaagcgtgtcaaggacggcccc
ccctctctcaccaccatctgcttctacgccttctacaacacggagcagctgctgaacacg
gcggaggtctccccggacagcaagctgctcgccgctggctttgacaactcctgtataaaa
ctgtggagtctgcgctccaagaagttaaaatccgaaccgcatcaagtagacgtgtcccgc
atccacttggcttgtgatatcttggagaaggaggacaacgaggacgataacgcaggcacg
gagatgaaggtcctgcggggacactgcgggccagtgtacagcaccaggttccttgcggac
agctcagggctgctctcctgctctgaggacatgtccatcaggtactgggacctcggcagc
ttcaccaacaccgtgctgtaccagggccacgcctaccccgtgtgggacctggacatcagc
ccgcacagcctgtacttcgccagtgggtcccacgaccgcacggccaggctgtggtcgttt
gatcggacgcacccgctacgcatctacgccgggcacctggcagacgtggactgcgtcaag
ttccaccccaattcaaactacttagccacgggctcgaccgacaagacggtccggctgtgg
agcacccagcaggggaactcggtgaggctcttcacgggccaccgcggccccgtgctctct
ctggcgttttcccccaacggtaagtacttggcatcggcgggcgaggaccagcggctgaag
ctgtgggacttggcgtccgggaccctctacaaagagcttcggggccacacggacaacatc
accagcctcaccttcagcccggacagcagcctgatcgcgtcggcgtccatggacaactcg
gtgcgcatctgggacatcaggagcgcgcactgcagcgcacccgctgacggctcgtccagc
gagctcgtgggcgtctacaccggccagatgagcaacgtgctgagcgtgcagttcatggcc
tgcaacctcctgctggtgaccggaatcacacaagaaaatcaggaacattga
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