Lagenorhynchus albirostris (white-beaked dolphin): 132507492
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Entry
132507492 CDS
T10760
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
Ribosome biogenesis [BR:
lalb03009
]
Eukaryotic type
90S particles
Other 90S particles
132507492 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132507492
NCBI-ProteinID:
XP_059982894
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Position
16:58999071..59040956
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AA seq
1875 aa
AA seq
DB search
MEESFPRGGTRKTHKSEKEKAFQQSFEQDNLFDISTEEESTKRKKIQKEPAKTKKLKVEK
RESNKFVREKFEILSAESLCEGMRILGCVKEVNELELVISLPNGLQGCVQVTEICDAYTE
KLNEQVAQEEPLQDLVSLPELFSPGMLVRCVVSSLDITKRGKKNVKLSLNPRNVNKVLSA
EALKPGMLLTGTVSSLEDHGYLVDIGVSGARAFLPLQKAQEYIQQKNKGAKLKVGHYLNC
LIEEVKGNGGIVSLSVGYSEVSAAIATEEQNWTLNSLLPGLVVKAQVQKVTPFGLTLKFL
SFFTGLVDFMHLDPKKGRTYFSNQPVRACVLCVHPRTRAVRLSLRAVFLQPGRPLTRLSC
QQLGAVLDDVPVQGFFGNAGATFRLTDGALAYARLSHLSNSKKVFKPETFKPGNTHKCRI
IDYSQMDELALLSLRTSVIKAQFLSYHDIKPGALVKGKVMTIKPYGMLVKVGRQIRALVP
PMHLADILMKNPEKKYHVGDEVKCRVLLCDPEARKLMMTLKKTLVESKLPAITCYADAKP
GLQTHGFILRVKDYGCIVKFYNDVQGLVPRHELSAEYIPDPESVFYTGQVVKVAVLNCEP
SKERMLLSFKLSGDPKEECAGHSQKKKKAINAGQLVDVKVLEKTKDGLQVAVLPHNIPGF
LPMSHLSDHVTNGPLLHCWLQAGDTLHRVLCLSEGEGRVLLCRKPALVSAVEGGQDPKSF
SEIHPGMLLIGFVKNIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKV
TNVDEEKQRMLLSLRLSDCTRGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEM
TPGMVLDLEVQEVLGDGSVLFSEGPVPGLVLRASKYHRAGQEVESGQKKKVVVLNVDMLK
LEVHVSLCHDLVNRKAKKLKKGSEHQAIVQYLEEPFALASLVETGQLAAFSLTSHLNDTF
RFDSEKLQVGQGVSLTLQTTEPGVTGLLLAVEGPAAKRTMRQTRKDSETVDEDEEVDPAL
VLGTVRKHTLSIGDVVIGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGTSPTAKLK
VGKKVTARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELEKDGHTALNTHSVSRLEK
IKQYQAGQTVTCFLKKYNVVKKWLEVDIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQA
LKATVVGSDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVLPKEGLTVSFPFGKIGRVSIFH
VSDSYSETPLENFTPQKIVRCYVLSATGPVLTLSLRSSRTNPETKSKITDPEINSIQDIE
EGQLLRGYVKSVQPSGVLLGLGPSVTGLAQHPHVSQYSLSKDAPYDRYLPEGKLLTAKVL
SLNRRENLVELSIPADDTGKPDVFSASLGLPLPKQEGRETEAEERDHKGEEEKEERKNQK
QKEKRIGKGQEGAQLPSKEKKEPRKPQAKKLGKRPRPESGSEQESGNKRQRRTAPSEEDD
SGVEVYYREGEEEVEETGVRPQEKQTRPAEAPRLQLSSGFAWDVELDSLTPALPPREESS
DSEEDEKPEQATQKKKSRKERELEKQKAEKELSRIEEALMDPRRQPESADDFDRLVLSSP
NSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQGS
LTKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLL
RRGQAGASHRVMQRALECLPKKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTD
VWSVYIDMLIKRGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKA
KALEYVEAKSSMWED
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagcttcccccgagggggtacaagaaagacccacaaatcagagaaagagaaa
gctttccagcagtcatttgaacaagacaacttatttgatatttctactgaagaggaatcc
accaaaaggaaaaagatccagaaagagccagcaaaaacaaaaaagttgaaagttgaaaag
agagaaagcaacaagtttgtaagagagaagtttgaaatccttagtgcggagtccctgtgt
gaggggatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgattagt
ctccccaacggcctccaggggtgtgtgcaagtgactgaaatctgtgatgcctacactgaa
aagctgaatgagcaggtggcacaagaagaacccctgcaggacctggtcagcttgcctgag
ctcttctcacctgggatgctggtgagatgtgtggtgagcagtctggacatcacaaagagg
ggcaaaaagaatgtcaagctgtctctgaaccccagaaatgtcaacaaagtgctgagtgct
gaggccctgaaacccggcatgctgctcacgggcactgtgtccagcctggaagaccatggc
tatctagtggacattggtgttagtggggccagagcttttctgccactgcagaaagcccag
gagtacatccaacagaagaacaaaggtgctaaattgaaggtaggtcactacctgaactgc
cttattgaagaggtgaaaggcaatggaggaattgttagtctgtctgttggttactcagaa
gtttctgctgccattgctactgaggagcaaaactggaccctcaacagcttgctaccagga
ctggtagtcaaagcccaggtacagaaggtgactccatttggccttacgctaaaattcctc
tcgttcttcactggcctggttgactttatgcacctggaccctaagaaaggcagaacatac
ttctcaaatcagccggtacgggcctgtgtcctctgcgtccatcctcggaccagagctgta
cggctgagcctgcgcgctgtcttcctgcagcccgggcgtccactcacccggctttcttgc
cagcagctgggagctgtactggatgatgttcctgtccagggctttttcggcaatgccggg
gccaccttcaggctgacggatggggctctggcctatgcccggctcagccatctctccaat
tctaagaaagtcttcaaacctgagaccttcaagccagggaacactcacaagtgtagaatc
atcgactacagccaaatggatgaactggctttgctctctctgcggacgtctgttattaaa
gctcagttccttagttatcatgacatcaaacctggggccttggtaaagggcaaagtgatg
accataaagccatacgggatgctggtgaaggtgggcaggcaaatcagggccctggtacct
cccatgcacctggctgacatccttatgaagaatccggagaagaagtaccacgttggggat
gaggtcaagtgccgggttttgctttgtgaccctgaagccaggaagctgatgatgaccctg
aagaaaaccctggttgagtccaaacttcctgccattacctgctatgctgatgctaagcct
ggtctgcagacacacggctttatcctcagggtcaaggactacggctgcattgtgaagttc
tacaatgacgtgcagggactggtgcccaggcatgagctcagtgccgagtatatccctgac
ccagaaagtgtcttttacactggccaggtggtgaaggttgcagtgctgaactgtgagcca
tccaaagagaggatgctcttgtccttcaagctgtcaggtgatccgaaggaagaatgtgcg
ggacacagtcagaagaaaaaaaaagccattaacgctgggcagttggtggatgtgaaggtt
ctggagaagaccaaagatgggctgcaggtggctgtcctgcctcacaacatccccggcttc
cttcccatgtctcatctgtcagaccacgtcaccaatggcccactgttgcattgctggctc
caggcaggtgacacccttcacagagtcctgtgtctgagcgagggtgaggggcgtgttctc
ctttgcaggaagccagctttggtgtctgcagtagagggtggccaggatcccaagagcttc
tcagagatccatcctggaatgctgctcattggttttgtgaagaacatcaaggactacggt
gtgttcgtccagttcccgtcaggccttagtggactggctcccaaagctatcatgagtgac
aagtttgtgacctccacaagtgaccactttgttgaggggcagacggtggttgctaaggtg
accaacgtggatgaggagaagcagcggatgctgctgtcgctgcgactgtcggactgcact
cggggggacctggccaccaccagcctcctcctcctgagccagtgcctggaggagcggcag
ggcgtccgcagcctcatgagcaaccgagactctgtgttgatccagacgctggctgagatg
accccagggatggtccttgacctagaggtgcaggaggtgttgggagatggctctgtactg
ttcagtgagggcccagtgcccggcctggtcctaagagccagcaagtatcatcgggcaggg
caggaggtggaatctgggcagaaaaagaaggttgtggtcttaaatgttgatatgttgaag
ttggaagtacatgtttccctctgccacgatttggtgaatagaaaagctaaaaagctgaag
aaaggcagtgagcaccaggcgattgtgcagtacttggaggaaccctttgcccttgcctcc
ttggtagagactggccagctagcagctttctccctgacctctcacctcaacgacaccttc
cgctttgattcagagaagttgcaggtgggacagggtgtctccctaaccctccagaccaca
gaaccaggagtgacaggtcttcttttggccgttgaggggccagctgctaagaggaccatg
agacagacccggaaggactctgagacggtcgacgaggatgaagaagtagatccagctctg
gttttagggactgtaaggaagcacaccctgtccattggggacgtggtcatagggaccgtc
aagtccattaagcccacccatgtggttgtgaccctggaagatggcatcattggctgcatc
catgcctcccacattctagatgatgttccagtgggcacatctcctactgccaagctgaaa
gttgggaagaaggtcactgcccgagtgattggcgggagagacatgaagacattcaagttt
ctcccaataagtcatcccagatttattcgaaccatcccggagctgagtgttcggccaagt
gagctggagaaggatggccacaccgctctcaacactcattctgttagccgcttggagaag
attaaacagtaccaggctggtcagactgtgacttgcttcttgaagaagtacaacgtggtt
aagaaatggcttgaggtggacatcgctccagacatccgggggagaattcccttactgctc
acttctcttagcttcaaggttctgaaacatccagataagaagttccggattggccaggcc
ctgaaggccaccgtggttggctcagattcctccaaggccttcttgtgtctttcactcata
ggtcctcacaagctcgagaaaggggaagtggccatgggccgcgtggtgaaggtgcttccc
aaggagggactgaccgtctcgttccccttcgggaagatcggaagagtcagtatatttcac
gtgagtgactcctactcagagacgcccctggaaaactttaccccacagaagattgtcagg
tgttatgtgctgtccgctacaggccctgtattgactttgtcactgcgatcgtccaggacg
aacccggagacgaaaagcaaaataacagatcctgagattaactccatccaggatattgag
gaagggcagctcctgaggggctacgtgaagtccgtccagccgtccggtgtgctcttaggc
cttggcccctcagttacaggtttggcccaacacccacatgtctcccagtacagcctgtcc
aaggatgccccttatgacaggtatctccccgaaggcaagctgctcacagccaaggtccta
agcctgaaccgccgggagaacctggtagagctgtcaatccccgccgacgacactggaaag
ccagacgtgttttctgcctccctgggactgccacttccgaagcaagaggggagggaaaca
gaggcagaggagagagaccacaaaggagaagaagagaaggaggagaggaagaatcagaaa
cagaaagagaagaggattgggaagggtcaggagggggcacagctgcccagcaaggagaag
aaggagccccggaagccccaggcgaagaagctgggcaagcggccgcgcccagagtctggc
agtgagcaggaaagcgggaacaagaggcagaggagaactgccccgtccgaggaggacgac
agcggtgtggaagtgtactaccgggagggagaagaggaggtggaggagacgggtgtgcgg
ccccaggagaagcagaccaggccggcagaagcaccccggctgcagctgtcttccggcttc
gcttgggatgtggagctggacagtctgaccccggccttgccacctcgcgaagagagctct
gacagcgaggaggacgagaagccagagcaggccacgcagaagaagaaaagcaggaaggaa
agggagctggagaagcagaaggcagagaaagagctgtcccgcatcgaggaggcgctgatg
gacccccggcggcagccggagtcggcagatgacttcgaccggctcgtgctgagctccccc
aacagctccatcctgtggctgcagtacatggccttccacctgcaggccacggagatcgag
aaggcccgggccgtggccgagagggcgctcaagaccatctccttcagagaggagcaggag
aagctgaacgtgtgggtggccctgctgaacctagaaaacatgtacggctcccaggggtca
ctgaccaaggtcttcgagcgggccgtgcagtacaacgagcctctcaaggtctttctccat
ctggctgacatctacactaagtcagagaaattccaggaagctggtgaactttacaaccgg
atgctgaaacgtttcaggcaggagaaagctgtctggatcaaatacggcgcctttcttctg
cggaggggccaggctggggccagtcaccgcgtgatgcagcgagccctcgagtgcctgcct
aagaaagagcacgtggatgtgattgccaagtttgcgcagcttgagttccagctgggggat
gcggagcgcgccaaagccattttcgagaacacgctgagcacctacccaaagcgcacggat
gtctggtcggtctacatcgacatgctcatcaagcgtggcagccagaaggaagtccgggac
atctttgagcgtgtcattcacctgagcctggcccccaagcgaatgaagttcttcttcaag
cgctacctggactacgagaagcaacacggcaccgagaaggacgtgcaggcggtaaaggcg
aaggccctggaatacgtggaggctaagagctccatgtgggaggactag
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