Lagenorhynchus albirostris (white-beaked dolphin): 132508029
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Entry
132508029 CDS
T10760
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04140
Autophagy - animal
lalb04211
Longevity regulating pathway
lalb05010
Alzheimer disease
lalb05014
Amyotrophic lateral sclerosis
lalb05016
Huntington disease
lalb05017
Spinocerebellar ataxia
lalb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132508029 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
132508029 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
132508029 (RB1CC1)
05014 Amyotrophic lateral sclerosis
132508029 (RB1CC1)
05016 Huntington disease
132508029 (RB1CC1)
05017 Spinocerebellar ataxia
132508029 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
132508029 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lalb01009
]
132508029 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lalb04131
]
132508029 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
lalb03029
]
132508029 (RB1CC1)
Protein phosphatases and associated proteins [BR:
lalb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132508029 (RB1CC1)
Membrane trafficking [BR:
lalb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
132508029 (RB1CC1)
Mitochondrial biogenesis [BR:
lalb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132508029 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
132508029
NCBI-ProteinID:
XP_059983804
LinkDB
All DBs
Position
17:complement(2707469..2768028)
Genome browser
AA seq
1626 aa
AA seq
DB search
MVPGAAGPAAAAAGGGGGASRNRIRVRYKLTESREIIMKLYVFLVNTGTTLTFDTELTVQ
TVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILSER
LPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDE
HLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSVEDIKLKLTHLGTAVSVMAKIP
LLECLTRHSYRECLGRLDSLPECEGSEKADMKTSTELVLSPDMPATMNKPSLTSFHKSVQ
HVAPDTTDAESGKEMREPCPSPVQQDEAAVDAKDGDLPFFNVSLLDWINVQDRPNDVESL
VRKCFDSMSRLDPRIIRPFIAECRQTIANLDNQNMKAIKGLEDRLYALDQMIASCGRLVN
EQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQEL
ANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAAVEVV
RRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCT
QKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFDPLHQHVLALHNLVKAAQS
LDEMSQTITDLLSEQKASASQTSPQAASSPRIESTTGITTTTSPRTPPPLTVQGTLCPAV
CPLEELSPDSIDAHTFDFETIPHPNIEQTLHQASLDLDSLAESPESDFMSAVNEFVIEEN
LSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTSARGQEQSGHHASLGVQLEKCRVT
AHDSHLSVQTIKEDLCHFRTFVQKEQCDFSNSLKCTAVEIRNIIEKVKCSLEITLNERHQ
KELQSLKSEYEGKLAALVKESEENENKITKLKGDLVCLEEVLQNKDNEFALVKHEKEAVI
CLQKEKDQKLLEMESIMHTQHCEMEELKQSRETVLADLKRLRVENDEKLQLLRAELQCLE
QSHLKDLEDTLQVRHTQELKKVMTGHEVCLEKLEKESQQRIEQMQDSHATAIQEKEQQLQ
ELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLVEQETEHLRTEI
GKLKQKIQDDNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLRAEVNKVTTLHHQ
ASEVEKGLKEGLAELQSKLDSELSALEKEKDEKITRQEEKYRAIIQNLEKDKEECVMWHE
QDREQLIQRLNCEKEAAVETARKEMSLEREAVEKELLEKIKHLESQIAKSHTIESTKEDS
SSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKE
NIISDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKRLEEEVSRLRGGGPVPFPGVA
AAPELYGACAPEPPAEAPDALGEGRPDSALETSTMSVRENVHMLSEERQRIMLLERTLQL
KEEENKRLNQRLMSQSMSSVSPRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLY
FLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAV
SWNKKV
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgggagccgcgggccctgctgctgccgccgccggcggaggaggaggcgcttcc
cgtaatcgtatcagagtgaggtataagctcacagaatccagagaaatcatcatgaagttg
tatgtgtttctggtgaacactggaaccaccctgacatttgacactgaacttacagtgcaa
actgtggctgacctgaaacatgccatccacagcaagtacaagatcgctattcagcaccag
gtgttggtggtcaacgggggagagtgcatggctgcagaccggagagtgtgcacctacagt
gccgggacggacacaaatccaatttttctttttaacaaggaaatgatcttatcggaacgt
ctacctgctattcctaaaactaccttttcaacagaaaatgacatggagataaaagttgaa
gagtcccttatgatgcctgcagtttttcacactgttgcttcaaggacacaacttgcagtg
gagatgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtccatgatgaa
catcttcagcaccaaggctgggcggcaatcatggccaatctggaggattgttcaaattcc
taccaaaagctacttttcaaatttgaaagtatttattcgaattacctgcaatctgtagag
gacatcaagttaaaacttactcatttaggaactgcggtttcagtcatggccaagattcca
ctgttggagtgcctaaccagacatagttacagggaatgtttgggaagactggattccttg
cctgaatgtgaaggctcagaaaaggccgatatgaaaacctccactgaactggtgctctct
cccgatatgcctgcaacaatgaacaaaccctccttaacctcatttcacaagtccgtgcaa
catgtagccccagacaccacagatgctgaaagtggaaaagaaatgagggaaccttgtcca
agtcctgtccagcaggacgaagctgcagtagatgctaaagacggtgacctgccttttttt
aatgtttctttgttagactggatcaatgtgcaggataggcctaatgacgtggaatcgctg
gtcaggaagtgctttgattccatgagcaggcttgatccacggatcattcggccctttata
gcagaatgccgtcagactattgccaatctggataatcagaacatgaaggccatcaagggg
ctggaggaccggctgtacgccctggaccagatgatcgccagctgcggccgactcgtcaac
gagcagaaagaactcgctcagggatttttagctaatcagatgagagctgaaaacttgaaa
gatgcgtctgtgttacctgatttgtgcctgagtcatgcaaatcagttgatgattatgttg
caaaatcatagaaaactgttggatattaaacagaagtgcaccactgccaaacaagaacta
gcaaataaccttcatgtcagactgaagtggtgttgctttgtgatgcttcatgctgatcag
gatggagagaagttgcaggctttgctccgcctcgttatagagctcttagagagagtcaag
atcgttgaagctctgagtacagttcctcagatgtactgcttagctgctgttgaggttgtc
aggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtcaaagatgga
aagcgattatatgaggctgaaaagtcaaaaagggaatcctttgggaagttatttaggaag
tcctttttaagaaatcgtctgtttaggggattggactcctggcccccatccttttgtaca
cagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagatttacagttt
ctgcaatcattttgtccttccgaagttcagccgttcctcagggtgcccctactttgtgac
tttgaccctctgcaccagcatgtacttgcgctacataatttggtaaaagcagcacaaagt
ttggatgaaatgtcacagaccattacagacctactgagcgaacaaaaggcatccgcgagt
cagacgtccccacaggcggcttcctcaccccggatagaaagcacgacaggaatcacaact
actacctcacccagaacaccccctccactcactgtgcagggcaccttgtgtcctgcagtc
tgtcccttagaagaattgtctccggatagcattgatgcacatacatttgattttgaaact
atcccccatccaaacatagaacagactcttcaccaggcttcgttagacttggattcatta
gcagaaagtcctgaatcagatttcatgtctgcagtgaatgagtttgtaatagaggaaaac
ttgtcatctcccaatcctatcagtgatccacagagtccagagatgatggtggaatccctt
tactcctcagtcatcaatgccatcgacagcaggcgaatgcaggacacgagtgcccgaggt
caggagcaatcaggccaccacgcgtctctcggcgtccagctggagaagtgccgtgtcact
gcccacgactcacacctcagtgtacaaaccataaaggaggacctttgccacttccgaacg
tttgtgcagaaggaacagtgtgacttctcaaattctttaaagtgtacagcagtagaaata
agaaacattattgaaaaagtaaaatgctctttggaaataacactaaatgaaagacaccaa
aaagaactacagtctttaaaaagtgaatatgagggcaaacttgctgcactagtaaaggag
agtgaagaaaatgaaaacaaaatcacaaagctgaaaggagacttggtgtgccttgaggag
gttttacaaaataaagataacgaatttgctttggttaaacatgagaaggaagctgtcatc
tgcctgcagaaggaaaaggatcagaagttgttagagatggaaagtataatgcatacgcaa
cactgcgagatggaagaactgaagcagtcacgggagaccgtgctagcagacttaaagagg
ctccgcgtggagaacgatgagaagctccagctgttgagggcagagcttcagtgcctggag
cagagccacctgaaggacttggaggacactctgcaagtcaggcacactcaggagctcaag
aaggtcatgaccggccacgaggtctgtttggagaaattagaaaaggaaagtcaacagaga
atcgagcagatgcaagattctcatgccacagccatccaggaaaaagaacagcagctccag
gaattaaaactcaaggtttctgatttgtcggacatgaggtgtaagttagaggttgaactt
gccctgaaggaagcagaaacggatgaaataaaaattttgctggaagaaagcagagcccag
cagaaggagaccttaaaatctctcgtcgaacaagagacagaacatttgagaacagagata
ggtaaactaaagcagaagattcaagatgataatgaaaattaccaggtgggcttggccgaa
ctacgaactttaatgacaattgaaaaagatcagtgcatttcagagttaattagtagacat
gaagaagaatctgatatgcttagggccgaggtgaacaaagtgacgacattgcatcaccaa
gcatctgaagtagaaaaaggcctgaaagaaggattggctgaactgcagagtaaactggac
tcagaactgagtgctcttgagaaagaaaaagatgagaagatcacccggcaagaagagaag
tacagagctattatccagaaccttgaaaaagacaaagaggaatgtgtcatgtggcacgaa
caggaccgagaacagctgattcagaggcttaattgtgaaaaagaggcagctgttgagact
gcccgtaaagaaatgagcttggaaagggaagctgttgagaaggagttgttagaaaaaatt
aaacatcttgagagtcaaatagcaaaaagtcataccattgaatctaccaaagaagattct
tcaagcctagtcgctgaacttcaagaaaagctccaggaagaaaaagctaagtttctagaa
caacttgaagagcaggagaaaagaaaaaacgaagaaatgcagaatgtgcgaacgtctttg
attgctgaacaacagaccaattttaatactgttttaacaagagagaaaatgagaaaagag
aacataatcagtgacctcagtgacaagctgaaaagcacgatgcagcagcaggagcgggac
aaagatttgatcgagtccctgtccgaggaccgcgcacgcttgctggaggagaagaaaagg
ctggaggaggaggtcagccggctgcggggcggcggccctgtccccttcccgggggtggcc
gccgcccccgagctgtatggggcctgtgcgcccgagcccccggcggaggccccggatgcc
ctcggcgaaggcaggccggactcagcgctggagaccagcacgatgtctgtccgagaaaac
gtccacatgctctctgaagaaaggcagaggataatgctgttggaacgaacactacagttg
aaagaagaagaaaacaagcggttgaatcagagactgatgtctcagagcatgtcgtccgtg
tccccaaggcattcggaaaagatagctattagagattttcaggtgggagatctggtcctc
atcatcctggacgagcgccatgacaattacgtgctcttcaccgtgagtcccaccttgtac
ttcctgcactcagagtcgctgcctgccctggacctcaaaccaggtgagggggcttcaggt
gcatctcgaagaccatgggtccttggaaaagtgatggagaaggagtactgtcaggccaaa
aaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtgaaagctgtg
tcatggaataagaaagtataa
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