Lagenorhynchus albirostris (white-beaked dolphin): 132508585
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Entry
132508585 CDS
T10760
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04360
Axon guidance
lalb04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
132508585 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
132508585 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lalb04040
]
132508585 (TRPC4)
Ion channels [BR:
lalb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132508585 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
132508585
NCBI-ProteinID:
XP_059984817
LinkDB
All DBs
Position
18:complement(13156978..13275235)
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AA seq
977 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCVDPLGRTALLIAIENENLELIELLLSCNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNIISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQGTKDSSNSADSDEK
SDNEGSSKDKKKNFSLFDLTTLIHPRSAAIASERHTVSNGSALVVQEPPREKQRKVNFVT
DIKNFGLFHRRSKQHAAEQNANQIFSVSEEVARQQAEAPLETNIQLESRGLASRGDLNIP
GLSEQCILVDHRERNTDSLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAKEEDCSADYD
ANLTDMVTHEDYVTTRL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgttaatgccccctacagagaccgcatccctctc
aggatagtccgagcagaatcagagctctcaccctccgagaaagcctacttgaacgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctagaggaagctgagatttattttaaa
atcaatattaattgcgtcgatccacttggaagaactgctctcctcattgcaatcgaaaat
gagaacttggagctcatagaactactcttaagctgtaatgtctatgttggagatgctcta
ttacacgccatcaggaaagaagttgtcggagctgtagagctgttactgaaccacaagaag
cccagtggagaaaaacaggtgcctcccatactccttgataagcagttctctgaattcact
ccggacattacacccatcattttggcagcccatacaaataattacgagataataaaactt
ttggttcagaaaggcgtctcggtgcccagaccccacgaggtccgctgtaactgcgtcgaa
tgcgtgtccagctcggatgtggacagtctccgccactcccgctccagactcaacatctac
aaggccctggccagcccctctctcatcgccctgtccagtgaagacccttttctcacagcc
tttcagttaagttgggagctccaggaactgagtaaggtggaaaatgaattcaagtcagag
tatgaggagctgtcacgacagtgcaaacaatttgctaaggacctactggatcagacaaga
agttcccgcgagctggaaatcattcttaattaccgcgatgacaacagtctcctagaagaa
caaagtggaaatgatctcgcgagactcaaattggccattaagtaccgtcagaaagagttt
gttgctcagcccaactgtcaacagctgctggcatctcgctggtacgatgagtttcccggc
tggaggagaagacactgggccgtgaagatggtgacgtgtttcataataggacttcttttt
cctgtcttctctgtgtgctaccttatagctcccaaaagcccccttggactgttcatccga
aagccatttatcaagttcatctgccacacagcatcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccatgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccacgattggtggaatctaatggattttgtg
atgaactccttatatctagcaacaatctccttgaaaatcgttgcatttgtaaagtacagt
gctcttaatccacgagagtcttgggacatgtggcatcccacgctggtggctgaagcttta
tttgctattgcaaatatattcagttccctgcgactgatctcactgtttactgcaaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagtttcta
ttcatctactgccttgtgttgctagcatttgccaacggcctaaatcaattgtacttctat
tacgaagaaacgaaagggttaagctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgctatttgagacactccagtccctgttttggtcaatatttgggctcatcaac
ttatacgtgaccaatgtcaaagcgcagcatgaattcaccgagtttgttggtgccaccatg
tttgggacatacaacatcatctctctggttgtcctacttaacatgttaatagctatgatg
aataattcttaccaacttattgctgaccatgcagatatagaatggaaatttgctcggaca
aagctttggatgagttattttgaagaaggaggtaccctgcctactcccttcaatgtcatc
ccaagccccaagtctctctggtacctgatcaaatggatatggacacacctgtgcaagaaa
aagatgagaagaaagccagaaagttttggaacaatagggaggcgagctgctgataattta
agaagacatcaccaatatcaagaagttatgaggaacctggtaaagcgatacgtggctgca
atgattagagatgccaaaactgaagaaggtctgactgaggagaactttaaggaactgaag
caagacatttctagcttccgctttgaagtcctggggttactaagaggaagcaaactctct
acggtccaatctgctcagggcacgaaggattcttctaactccgcagactcggatgaaaag
agtgataacgaaggtagtagcaaggacaagaaaaagaactttagcctcttcgacttaacc
accctgattcacccacgatcagcagcgatcgcctccgaaagacacaccgtcagcaacggc
tccgccctggtggtgcaggagcccccgagggagaagcagagaaaagtgaattttgtgacc
gatatcaaaaacttcgggttatttcatagacgatcaaaacaacacgctgccgagcaaaat
gcaaaccaaatcttctccgtttcggaagaggtggctcgtcaacaagctgaagcaccacta
gagacaaacatccaactggaatctcgagggttagcttcccggggtgacttgaacatccca
ggtctcagcgaacagtgtatattagtagatcatcgagaaagaaatacggattccctgggt
ttacaggttggcaagagagtgtgttcattcaagtcggagaaggtggtggtggaggacacg
gttccaatcataccaaaggagaaacacgcaaaggaagaggactgcagtgcagactacgat
gcaaacctcacagacatggtcacccatgaagattacgtgaccacaagattgtga
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