Lagenorhynchus albirostris (white-beaked dolphin): 132508842
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Entry
132508842 CDS
T10760
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lalb03000
]
132508842 (SOX1)
Transcription factors [BR:
lalb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132508842 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132508842
NCBI-ProteinID:
XP_059985209
LinkDB
All DBs
Position
18:77571144..77573774
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AA seq
389 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGAGAKANQDRVKRPMNAFMVWSR
GQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPR
RKTKTLLKKDKYSLAGGLLAAGAGGGGTAVAMGVGVGVGAAAVGQRLESPGGAAAGGYAH
VNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHNP
QPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAAAA
AAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAAA
AAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctgtcgggcccggccggggcgggcgggggcggcggtggcggcggcggcggcgcggga
gccaaggccaaccaggaccgggtgaagcggcccatgaacgccttcatggtgtggtcccgc
ggacagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaaggtcatgtccgaagccgagaagcggcctttcatcgacgag
gccaagcggctgcgcgcgctgcacatgaaggagcacccggactacaagtaccggccgcgc
cgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctgctggcg
gcaggcgcgggcggcggcggcacggccgtggccatgggcgtgggcgtgggtgtgggcgcg
gcggcagtgggccagcgcctcgagagcccgggcggcgcggcggccggcggctacgcacac
gtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcggcggccgccgcg
gccatgatgcaggaggcgcagctggcctacgggcaacatccgggcgcgggcggcgcgcac
ccgcacgcgcacccggcgcacccccacccgcaccacccgcacgcgcacccgcacaacccg
cagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatctccaactcgcag
ggctacatgagcgcctcgccctcgggctacggcggcctcccctacggcgccgcggccgcc
gcagccgccgccgcgggcggcgcgcaccagaactcggccgtggcggcggcggcggcggcg
gcggccgcgtcgtcgggcgccctgggcgcgctcggctcgctcgtcaagtcggagccgagc
ggcagcccgccggccccggcgcactcgcgggcgccgtgccccggggacctgcgtgagatg
atcagcatgtacttgccggccggcgagggcggcgacccggcggcggcggcggccgcagcc
gcggcgcagagccggctgcactcgctgccgcagcactaccagggcgcgggcgcgggcgtc
aacggcacggtgcccctgacgcacatctag
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