Lagenorhynchus albirostris (white-beaked dolphin): 132508996
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Entry
132508996 CDS
T10760
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04151
PI3K-Akt signaling pathway
lalb04382
Cornified envelope formation
lalb04510
Focal adhesion
lalb04512
ECM-receptor interaction
lalb04820
Cytoskeleton in muscle cells
lalb04926
Relaxin signaling pathway
lalb04933
AGE-RAGE signaling pathway in diabetic complications
lalb04974
Protein digestion and absorption
lalb05146
Amoebiasis
lalb05165
Human papillomavirus infection
lalb05200
Pathways in cancer
lalb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132508996 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132508996 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132508996 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132508996 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
132508996 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
132508996 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
132508996 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132508996 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
132508996 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
132508996 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
132508996 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
132508996 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lalb04147
]
132508996 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
lalb00536
]
132508996 (COL4A2)
Exosome [BR:
lalb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
132508996 (COL4A2)
Glycosaminoglycan binding proteins [BR:
lalb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132508996 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
132508996
NCBI-ProteinID:
XP_059985528
LinkDB
All DBs
Position
18:76392741..76570691
Genome browser
AA seq
1711 aa
AA seq
DB search
MDRDQRAASRPALRRWLLLGAVTVGLLAQGVLAGVKKFDVPCGGRDCSGGCQCYPEKGGW
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGDRGAPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTVGDAGYPGPSGPGGFLGPRGPQGPKGQKGEPYALSSEDRD
RYRGEAGVPGLVGFQGPPGRPGPVGQMGPVGAPGRAGPPGPPGPKGQPGNRGLGFYGEKG
EKGDMGQQGPGGIPPDNSYVERPKNDVILPEQYKGEKGSEGEPGRKGISMKGEEGIMGFS
GVRGAPGFDGEKGSPGQKGSRGPDGYQGPDGYPGPKGEMGEPGPPGPPAYSPHPSLDKGA
RGDPGFHGAPGDPGARGEPGDLGLPGPPGTSIGDEDEKRGLPGEMGPKGFTGEQGIPALY
PGLPGADGRPGLRGPPGFPGPPGPDGFLFGLKGAEGRVGYPGPSGFPGARGQKGWKGDAG
DCQCAEGDQFIGGLPGPPGPKGFPGTNGEPGRKGSPGDPGQHGIPGFPGFKGTPGGVGPP
GPKGMKGDSRTITTKGERGQPGVPGVPGLKGDSGIPGRDGLDGFPGLPGSPGDGIKGPSG
DAGHPGPPGTKGIPGERGPPGLGLPGPKGERGFPGDAGLPGPPGFPGPPGTPGAPGQIDC
DTGVKRPIGADGQETVQPGCVGGSKGSPGQPGPPGPPGAKGLRGLPGLSGTDGAQGLKGL
PGDPGPEGFPGPPGFVGPRGVKGAVGRPGLDGLPGPSGLPGPVGPPGDRGLPGEVLGAQP
GPRGDTGLPGRSGLKGPPGERGPPGFRGSQGMPGMPGPKGQQGFPGPSGQPGLPGPPGQH
GYPGAPGREGPLGPPGTPGFRGLPGDRGEPGDTGVPGPVGMKGVSGDRGDPGWQGERGHP
GSPGFEGVAGMPGAPGPKGVKGSPGMDGFQGLLGLKGRSGLPGNKGETGFFGVPGLKGLA
GEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSG
VPGLPGKPGYVKGVKGDTGFPGVPGSPGFPGVPGSPGISGFPGFTGSRGDKGAPGRVGLH
GEIGPIGDFGDIGNTIDLPGSPGLKGEGGTAGAPGLKGFFGEKGSEGDVGFPGITGLAGV
QGPPGLKGQTGFPGLTGLQGPQGEPGRAGVPGTKGDYGWPGSPGLPGLPGLRGIGGLHGL
PGTKGFPGSPGADIHGDAGLPGPAGARGDPGEANTLPGPAGPPGRKGERGVPGERGPVGS
PGLQGSPGITPPSNISGLPGDVGAPGIFGLEGYRGPQGPPGPVALPGIKGDEGSPGAPGN
PGTKGWVGDSGPQGRPGVFGLLGEKGPRGEQGFMGNTGAAGSVGDRGPKGPKGDRGLPGA
PGAVGAPGIAGIPQRVAIQRGPVGPQGRRGPPGPQGEMGPQGRPGEPGFRGTPGKAGPQG
RGGVSAVPGFRGDQGPVGLQGPVGYEGEPGRPGSPGLPGMPGRSVSIGHLLVKHSQTEQD
PMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRN
DKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPPGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPE
QSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagaccagcgcgcggcgtcgcgccctgccctgcggcggtggctactgctggga
gctgtgacagtggggctcctggcccagggcgtcctggcgggcgtgaagaagttcgatgtg
ccctgtggagggagagactgcagtgggggctgccagtgctaccccgagaaaggaggatgg
ggccagccagggccagtgggcccacagggatacaccgggccccccggcttacaagggttc
ccaggactgcaaggccgcaaaggtgacaagggtgacaggggggctcccggcatcacagga
ccgaagggagacgtgggagccagaggcgtttctggatttcctggtgccgacggaattccc
ggacatcctggccagggcgggcccagaggaccgcctggctacgacggctgcaacgggaca
gtgggtgacgcaggctacccgggacccagcggccctggcggcttcctcggcccccgtggg
ccccaaggacccaaagggcagaaaggcgagccctacgctctgtctagtgaggaccgcgac
agatacaggggggaagctggagtgcccggactggtcggtttccaggggcctcccggccgc
cctgggcctgtgggacagatgggtccggttggagctccaggaagagcgggaccccctgga
ccccctggaccaaaaggacagccaggcaacagaggacttggtttttacggagaaaaagga
gaaaagggcgacatgggacagcagggacccggtgggattccaccagacaacagttacgtc
gagaggcccaaaaatgacgtgatcctcccagagcagtataagggtgaaaaaggaagtgag
ggggaaccaggaagaaaaggcatttccatgaagggagaagaaggaatcatgggcttttca
ggagtgcggggtgcccctggcttcgatggtgagaaaggttcaccgggacagaagggaagc
agaggaccggatggttaccaaggccctgatggatacccaggacccaagggagaaatgggt
gaaccaggcccccccggcccaccagcctactccccacatccttccctggacaaaggtgcc
agaggggacccaggattccacggagcccccggggacccaggagcccggggggagcctgga
gacctcggcttgccaggcccgcctggtacatccatcggagatgaagatgagaagagaggc
ttaccaggcgagatgggacccaaaggcttcacaggagagcagggcatccccgccctgtac
cccggcctgccgggagctgacggaaggccagggctccgaggtcccccagggttcccggga
ccacctggcccagacggtttccttttcggccttaaaggagcagagggcagggtgggctac
cctggaccttctggtttccccggggctcgcggacagaaaggatggaaaggcgatgccggc
gactgtcaatgtgcagagggtgaccagttcattgggggtcttccggggccaccaggaccc
aagggctttcccggcaccaatggggaaccagggaggaaaggcagcccgggagaccccggc
cagcacggcatccccgggttcccaggattcaagggaacccctggtggtgttggccctccc
gggcccaaaggaatgaagggagattctcgaaccatcaccaccaaaggtgagcggggccag
ccaggtgtcccaggtgtgcctggactgaaaggggacagcggcatcccaggccgtgatggg
ctggatggattcccaggcctcccaggctctcccggtgatggcatcaaaggcccctcaggg
gacgcaggccacccaggaccccccggtactaagggcattccaggagaaaggggcccccca
ggattggggctgccaggccccaaaggcgagcgtggcttccccggcgatgctggattacct
ggacctccaggcttccccgggcctcccggcacccccggcgctccaggacaaatagattgt
gatacgggcgtgaaaaggcccatcggagcagacggacaggagaccgtccagccaggttgt
gttggagggtctaagggatcgccgggccagccgggcccccccggccccccaggtgccaaa
ggcctcagagggcttccgggattatcgggaactgacggagcacaagggctcaagggtctc
ccgggagatccaggtccagagggattcccaggacccccaggctttgtggggcctcgagga
gtcaaaggtgcagtaggccgccctggcctggatggactcccgggtccctccggcctgccg
gggccagtcgggcctccgggagacaggggcctccctggagaagtcttgggggcccagccc
gggccccggggagacaccggcctgcctggacgctctgggctgaagggcccccccggagag
agaggccctcctggattccggggaagccaggggatgccaggaatgccgggcccgaagggt
cagcagggcttcccaggaccttcgggccagccgggactgcccgggccaccaggacagcat
ggctaccctggagctcccggccgggaagggcccttggggccgccgggcaccccaggtttt
agaggtctgcctggagacagaggggagccaggtgacacaggcgtccctggccccgtgggc
atgaagggcgtctccggggatagaggtgaccctggctggcagggtgagaggggtcatccc
ggaagccctggattcgaaggagtggccgggatgcctggtgccccgggccccaaaggagtt
aagggttctcccgggatggacggcttccaaggcttgctcgggctcaaggggagatccggg
cttccgggaaacaaaggagagactggattttttggagtccccgggctgaagggcctggct
ggcgagcccggtgtgaaaggcagccgaggggaccccggcccccccggaccacctcccatc
atcctgccaggaatgaaagacatcaaaggagagaaaggagatgaaggccccatgggactg
aaaggatacctgggcttgaaaggccttcccggaatgccagggatccccgggctgtcggga
gtccctgggctgccggggaaaccaggctacgtcaaaggagtcaaaggagataccggattc
cccggcgtgcccgggtcaccaggattccccggcgtgcccggctcccccggaatctcaggg
tttccgggcttcacaggcagtaggggcgacaagggagctccggggagagtaggccttcac
ggcgagatcggccccatcggtgactttggtgatattggaaacactatagaccttccagga
agtccaggcctgaagggggaaggaggcaccgctggagcaccaggtctaaagggattcttc
ggagagaaaggatcagagggtgatgtcggcttccctgggatcaccggcctggcaggagtc
cagggccctcctggacttaaagggcaaacaggctttccaggactgacagggctgcagggg
cctcagggagagccgggacgggcgggagtgcccggcaccaaaggagactacggctggccg
gggagcccaggcctaccaggtctgcccggcctccgcggcatcggcggattacacggcttg
ccaggcaccaaaggcttcccaggatccccaggtgcggacatccacggggacgccggctta
ccaggtcctgccggggccaggggtgacccaggagaggccaacacccttccaggccccgca
ggacccccgggacggaaaggggagcgtggagtcccaggggaacgaggcccggttgggagc
ccaggacttcaggggtctccaggcatcacccccccttccaacatctctgggttaccaggt
gacgtaggcgcgcctgggatttttggcctggaaggttatcgaggtccccaggggccacct
gggcccgtggctcttcctggaatcaaaggagatgaggggagtccaggagcccccggaaac
ccggggaccaaaggatgggtcggggactccgggccccagggccggcctggcgtgttcggg
ctcctgggagaaaaagggcccagaggggagcaaggattcatgggcaacacaggcgccgcc
gggagtgtgggagaccgaggccccaaaggacccaaaggagatcgaggactcccgggtgcc
ccgggtgctgtgggcgccccggggattgcaggaatcccccagagggttgccatccagcgg
gggccagtgggtccgcagggaaggagaggccctccggggcctcagggggagatgggaccc
cagggccgcccgggagaaccaggtttccgcgggactccagggaaggcagggccccaggga
agaggcggcgtgtcagctgttcccgggttccgaggagaccaggggcccgtggggctgcag
gggcccgttggctacgaaggggagccaggccgccccgggagccccggcctgcccggcatg
cccggccgcagcgtcagcatcggacacctcctggtgaagcacagccagacggagcaggac
cccatgtgccccgtgggcatgaacaagctctggagcggatacagcctgctgtacttcgag
ggccaggagaaggcccacaaccaggatctggggctggcgggctcctgcctggcccggttc
agcacgatgcccttcctgtactgcaaccctggcgacatctgctactacgccagccgcaac
gacaagtcctactggctctccaccaccgccccgctgcccatgatgcctgtggccgaggag
gacatcaggccctacatcagccgctgctccgtgtgcgaggccccggccgttgccattgcc
gtccacagccaggacgtctccatcccccactgcccgcctggatggcggagcctgtggatc
ggatattccttcctcatgcacacggccgcgggcgacgaagggggcggccagtcgctggtg
tcaccgggcagctgcctggaggacttccgagccacgccattcatcgagtgcaacggcgcc
cgaggcacctgccactactatgccaacaagtacagcttctggctcaccaccatccccgag
cagagcttccagggctcaccctcggccgacacactcaaggccggcctcattcgcacgcac
atcagccgctgccaggtgtgcatgaagaacctgtga
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