Lagenorhynchus albirostris (white-beaked dolphin): 132509122
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Entry
132509122 CDS
T10760
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
132509122 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lalb03000
]
132509122 (CIC)
Transcription factors [BR:
lalb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132509122 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
132509122
NCBI-ProteinID:
XP_059985700
LinkDB
All DBs
Position
19:12847339..12874261
Genome browser
AA seq
2528 aa
AA seq
DB search
MKPMKKACAGLPGSGSGGKSPPATRAKALRRRGAGEGDKPEEEDDEAQQQQPGPEEAEEG
EEEAERGTGAEGLPPELHPDDPAPGPAEEPKGEGEAGRWEPSLSRKTATFKSRAPKKKYV
EEHGAGSGSSGAAGAPEERARTPEEAGTPGVPPQPPTSARSSSTDTASEHSADLEDEPAE
AGGLGPWPPGSTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRALT
FYEGAPGSGVDVVLDATPPPAALVVGTAVCTCVEPGVAAYRAGVVVEVAAKPAAYKVRFS
PGPSSQPGPAATPPQPPQREPEDAVWVARSSLRLLRPPWEPEALPRKPPAGPEEGQAEPG
AALPPCPAALDLKQPEDAEVSKISFGGHLGSCEEGEEKHPPALGTPALLPLPPPQLLSPP
PKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAAQQKYKKGD
VVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGPGGAGR
PAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVMLVS
LGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSRHLSA
STPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLPHPGAL
GAPGAAGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLLLL
PPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPAEVGAGSEARAGGPGRGCRE
TPVPPGMASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAFHPSPAAL
LPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPS
EAQQPASHLVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPGPPHTLGV
VEPGKGPLPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSA
LPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGE
WWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKEPR
ERSMSETGTAAAPGVSSELLSVTAQTLLSSDTKAPGSSSCGAERLHTVGGPGSARPRAFS
HSGVHSLDGGEVDSQALQELTQMVSGPVSYSGPKPSTQYGAPGPFAAPGEGGTLAASGRP
PLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSTTDIDLKCKERVTDSES
GDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPSLDPEPPGPPDPPAGFGKGYGPTPSSSS
SPASSSASAATSFPLGSGTFKAQESGQGSTTGPLRPPPPGTGGPATPKATRFLPTDPATF
RRKRPESVGGLEPPGPSVIAAPPSGGGSVLQTLVLPSNKEERESSGARMPSAPAPSLAYG
APAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTETVAGSRAP
GGSPLGVSLVYSDKKSGAATSTASHLVAGPLLGTVGKAPATVTNLLVGAPGYGAPAPPAV
QFIAQGGPGSGTAAGSGAGAGSGPNGPMPLGILQPGPLGKAGGITQVQYILPTLPQQLQV
APAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPP
KAQSVSPVQAPPPGGSAQLLPGKVLVPLATPSMSVRGGGTGQPLPLVSPPFSVPVQNGAQ
PPSKIIQLTPVPVSTPSGLVPPLSPATLPGPASQPQKVLLPSSTRITYVQSAGGHALPLG
TSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSPQ
LPPTCAAPSGPVITAFYPGSPVPTSSAPLAQPSQAPPGLVYTVATNTTPPAATILPKGPP
APATATPAPTSPFPSATAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAPGR
PGPASRQPLEPGPAREPPASESELEGRPTTPAPPLPPETWAPPARSSPPPPPPAEERTSA
KGPETMVSLNPVSSISLPSSPQASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPAPAPAP
GSSGSSSEGSSGRAAGDTPERKEAASAGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFA
ELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSC
SSEPNTPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQD
HGFFPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPP
TVTAAAPVPTPSPAGGPDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPSG
PSTAATGR
NT seq
7587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatgaagaaggcgtgcgccggcctcccaggttctggcagcggtggcaagtcc
cccccagccaccagggccaaggccctgaggcggcgaggggctggggagggtgacaagcca
gaggaggaagatgatgaggctcagcagcagcagccggggccagaagaggctgaggagggt
gaggaggaggccgagcggggcacaggggctgaagggctgcccccagagctgcaccccgac
gacccggccccaggcccagccgaggaacccaagggggagggggaggcaggccgctgggag
ccctcactcagccgaaagacggccacgttcaagtcacgagcgcccaagaagaagtatgtg
gaggagcatggggccggcagtggcagcagtggggcggctggtgcccctgaagagcgggca
cggacccccgaggaggcgggcaccccgggggtgcctccgcagccacccacctctgcccgc
tcctcctccaccgacacagccagcgagcactcggccgacctggaagatgagccggccgaa
gctggtggtttaggtccctggccccctggcagcaccagcggtggctatgacctgcggcag
ctgcggtcccagcgggtgctggctcggcgtggggacggtctcttcctgccggctgtggtg
cgccaggtgcgccgaagccaggacctgggtgtgcagttccctggggaccgggccctgact
ttctacgagggggcacctggcagtggtgtggatgtggttttggatgccacgccaccgcca
gctgcgctggtggtgggcacagcggtctgtacctgtgtggagcccggtgtggctgcctac
cgtgccggggtggtggtggaggtggccgccaagccagctgcctacaaggtccgcttcagc
cctggccccagctcccagccgggcccggcggccaccccgccgcagccgccgcagcgtgag
cccgaggacgcggtgtgggtggcccgctccagcctgcgcctgctgcggcccccgtgggag
cccgaagccctgccgaggaagcccccggcgggtcctgaggaggggcaggccgagccgggg
gccgccctgcccccctgccctgctgccctggacctcaagcagcccgaggatgccgaggtc
tccaagatcagctttggtggccacctggggtcttgcgaggagggtgaggagaagcacccg
ccagccctgggcaccccggccctgctcccactgcccccgccccagctcctgtcaccgcca
cccaagtccccagccttcgccggcccaggccgccctggcgagcagccctcgccctgccag
gaggggagccagggcggcagccgcagcagcagcgtggcctccctggagaagggggctgca
ccagccgcccgggcccgcacgccactgacagcagcccagcagaaatacaagaagggagac
gtggtctgcacacccaatggaattcgaaagaaattcaatggcaagcagtggcgacggctg
tgctcgagagatggctgcatgaaggagtcccagcggcggggctactgctcccgccacctg
tccatgcgaaccaaggagatggagggcctggcggacagtggcccaggtggggctgggcgg
ccagctggtgtggcggcccgtgagggcagcaccgagttcgactggggtgatgagacatct
cgggacagtgaggccagcagcgtggcagcccggggagactcacgcccacgcctggtggcc
cctgctgacctgtcacgctttgagttcgacgagtgtgaagcggctgtgatgctggtgtca
ctgggcagctctcgctcgggcacaccctccttctcccccgtctctacgcagtcacctttc
tcgccagccccgtcaccctcaccctcaccactcttcggcttccgccctgccaacttcagc
cccatcaacgcctcgccagtcatccaacgcactgctgttcgcagtcgccacctgagcgcc
agcacccctaaggcaggcgtgctgacgccgccggacctgggccctcacccacccccacct
gccccccgagagcgccattcctctggcatcctacctaccttccagaccaacctgaccttt
actgtgcccatcagccctgggcgacggaagacagagctgctgccccacccaggggcgttg
ggggcccctggtgcagcaggcggaggagccgccccagacttccccaagagtgacagctta
gactctggtgtggattcggtgtcccacacacctacaccctccacaccggctggcttccgt
gctgtgtcgcccgccgtgcccttctcccgctcccgccagccctcgccgttgctgctgttg
cccccacctgccggcctcacctcggatcctgggccttccgtgcgcagggtgcctgccgtg
cagcgggactcacccgtcatcgtccgcaaccccgacgtgccactgccctccaaattccct
gcggaggtgggcgctggcagtgaggcacgggccgggggacctgggcggggctgccgagag
actccggtgccgcccgggatggccagtgggaagcctggcctgcctccacctctgccggcc
cccgtgcccatcactgtgcctccagctgcgccgacggccgtggcccagccgatgcccacc
tttggcctggcttcctcgcccttccagccggtggccttccacccctcacctgctgccctg
ttgcccgtcctggtgcccagcagctacaccagccatcctgcccccaaaaaggaagtcatc
atgggccggcctgggacagtgtggacgaacgtggaacctcgctctgtggccgtgttcccc
tggcattccttagtccccttcctggcccccagccagcctgacccctccgtgcagccaagt
gaggcccagcaacctgctagccacctagtggcctccaaccagagcaaagagcctgctgag
tcggcagctgttgctcatgagcagccaccaggcgggacggggaatgctgaccctgggcgg
ccccctggagctacatgccccgagagcccagggcccggacccccccacactttgggggtg
gtggaacctggaaagggcccccttcccacgacggaggaggaggcccctggtcctccagga
gagccccggctggacagtgagacagagagtgaccacgacgatgccttcctctccatcatg
tctcctgagatccagttgcctctgccgcctgggaaacgccggacgcagtccctcagcgcc
ctgcccaaggaacgagactcatcttcagagaaggatggacgcagccccaacaagagggag
aaggaccatatccggcggcccatgaatgccttcatgatcttcagcaagcggcaccgggcc
ctggtccaccagcgtcaccccaaccaggacaaccggaccgtcagtaagatcctgggcgag
tggtggtacgctctggggcccaaggagaagcagaagtaccacgacctggccttccaggtg
aaagaggcccactttaaggcccacccagactggaaatggtgcaacaaggaccggaagaag
tccagctcagaggccaagcctacaagcctgggactggcaggggggcacaaggagccaagg
gagcggagcatgtcggagacaggcaccgccgctgcccctggagtgtcctcggagctcctg
tccgtcacagcccagacgctcttgagctcggacaccaaggctccggggagcagctcctgt
ggggcagaacgtctgcacacagtcggcggacctggctcagcccggcctcgagccttctcc
cacagtggggtccacagcctggatggcggggaagtagacagccaggcactacaggaactg
actcagatggtgtctggccctgtatcctactctggcccaaagccttccacccagtatggg
gctccaggcccctttgcggcccccggtgagggaggcactctggcagccagtgggcggccc
ccactgctgcccacccgggcctcccgttcccagcgtgcagccagtgaggacatgaccagt
gacgaggaacgcatggtcatctgtgaggaggaaggggatgatgatgtcattgctgacgat
ggcttcagcaccactgacattgacctcaagtgcaaggagcgggtgaccgacagcgagagc
ggagacagctctggggaggacccagagggcagcaagggatttggtcggaaggtgttctcg
cctgtgatccgttcctcctttactcactgccgtccatcactggaccctgagcccccaggg
cccccagatccacctgccggcttcggcaaaggctacgggcccaccccatcctcctcatcc
tcgcctgcctcctcctcggcctcagcagccacctccttccctctgggctcagggaccttc
aaggcccaggagtcaggtcagggcagcacaacaggtcccctacggcccccaccccctgga
actgggggcccagcaacgcctaaggccacccggtttctccccacggatcctgccaccttc
cggcgcaagagacctgaaagcgtggggggcctggagccaccaggcccctcagtcattgcg
gcacctcccagcgggggaggaagtgttctgcagacactggtcctgccctcaaacaaggag
gaacgggagagcagcggagctcgcatgccctcggccccagccccgtcgctggcctatggg
gccccagcagcccccctgtcccgcccggccgccaccatggtcaccaatgtggtgcggcct
gtcagcagcactcctgtgcccatcgcctctaagcctttccccacttctggccgggcagaa
gcgtctccaaatgacacggccggtgccaggacagagacagtcgctgggtcccgggcgcct
gggggctccccactgggcgtcagcttagtgtattcagacaagaagtcgggagcagccacc
tcaacagcctcacatctggtggctggacccctactgggcactgtggggaaggcgcctgcc
actgtcaccaacctgctggtgggcgccccgggctatggggccccagcgcccccagctgtc
cagttcattgcccaggggggccctggcagcgggacggctgcgggctcaggagcaggtgct
gggagtgggcccaatgggccaatgcccctgggcatcctgcagccaggtcccctgggcaag
gctgggggaatcacccaggtgcagtatattctgcccacgctgccccagcaacttcaagtg
gcgcctgccccagcaccagcccctgggaccaaggcagcagctcccagcggccctgcaccc
accaccagcatccgtttcaccctcccgccgggcacctccaccaacggcaaagtcctggct
gccaccgcacccactcctggcatccccatcctgcagtccgtaccctccgccccgcccccg
aaagcccagtcagtttctcctgtgcaggccccgcccccgggtggctcagcccagctgcta
cctgggaaggtactagtgcccttggccacccctagcatgtcagtgcggggaggagggacc
ggccagccgctgcccctggtgagcccacccttctcagtacctgtgcagaacggtgctcag
ccacccagcaagatcatccagctaactccggtgcctgtgagcacacccagcggcctggtg
ccgcccctcagcccggccacgctccccggacccgcctctcagcctcagaaggttctgctg
ccctcctccaccaggatcacctacgtgcagtcagcaggcgggcatgcgctgcccctgggt
accagtcctgcatccagtcaggctggaacagtcacctcgtacggacccacgagctcagta
gccctaggcttcacctcgctggggcccagcggccccgccttcgtgcagcctctgctttca
ggccaagccccattgctggctcctggccaggtgggcgtgtcacccgtgcccagcccccag
ctgcctcccacctgcgcagcccccagtggtcccgtcatcacagcgttttaccctggcagc
cccgtacccacctcctcagcacccctggcccagccatcccaggctcccccaggcctggtc
tacaccgtggccaccaacaccaccccacctgctgccaccatcctgcccaagggcccaccg
gcccccgccactgccaccccggcccctaccagcccttttcctagtgccacagcaggctcc
atgacctacagtttagtggcccccaaggcccagcggcccacccccaaggccccccagaaa
gtgaaggcggccatcgccagcattcctgtgggctcctttgaggcaggtgcccctgggcgg
ccaggccctgcgtcccggcagccgttggagcccggcccagctcgtgagccccctgcatcc
gagtcagagcttgaggggcggccaacaacaccagcccctccactgcccccagagacctgg
gctcccccggcccggagcagtcccccgccgcccccacctgctgaggagcggaccagtgcc
aagggccctgagaccatggtgagtctgaacccagtgtcctccatctccctgccatcctca
ccccaggccagcaaattccccagctcatcttcagactggcgagtccccgggctgggcctg
gagagccgaggggagcctcccacccctcccagcccggccccggctccagccccagcccct
ggtagcagcggcagcagcagtgagggcagcagtgggagggcagctggggacacccccgag
cgcaaggaggcggctagtgctggcaagaaggtcaaggtgcggcccccgcccctgaagaag
acctttgactctgtggacaacagggtcctgtcggaggtggacttcgaagagcgctttgct
gagctgcccgagtttcggcctgaggaggtgttgccctcgcccaccctgcagtctctggcc
acctcaccccgggccatcctgggctcctaccgcaagaagaggaagaactccactgacctg
gactcagcccccgaggaccccacctcgcccaagcgtaagatgaggagacgctccagttgc
agctcggagcccaacacccccaagagtgccaagtgcgagggggacatcttcacttttgac
cgtacaggtacagaagctgaggatgtgctcggggagctggaatacgagaaggtgccctac
tcgtcgctgcggcgcaccctggaccagcgccgggccctcgtcatgcagctcttccaggac
catggcttcttcccatcagcccaggccacggcagccttccaggcccgctatgcagacatc
ttcccctctaaggtctgtctgcagctgaagatccgtgaggtgcgccagaagatcatgcag
gcggccactcccacggagcagcccccgggagccgaggcccccctccctggaccgcctccc
actgtcactgctgctgcccctgtccccactcccagccctgctgggggccctgaccccacc
tcacctggctcggactctggcacggccccggctgccccgccattgcctccgcccccagag
ccggggcccggacagcctggctgggaggggcccccccaaccctcaccacccccctctggt
ccctccacagctgccacaggcaggtga
DBGET
integrated database retrieval system
