Lagenorhynchus albirostris (white-beaked dolphin): 132509644
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Entry
132509644 CDS
T10760
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lalb01001
]
132509644 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lalb04121
]
132509644 (TRIM28)
Enzymes [BR:
lalb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132509644 (TRIM28)
Protein kinases [BR:
lalb01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
132509644 (TRIM28)
Ubiquitin system [BR:
lalb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132509644 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
PHD_2
PHD-1st_NSD
zf-RING_2
YaaC
Motif
Other DBs
NCBI-GeneID:
132509644
NCBI-ProteinID:
XP_059986888
LinkDB
All DBs
Position
19:complement(1708184..1714374)
Genome browser
AA seq
838 aa
AA seq
DB search
MAASAAAASAAAAAASGSPGPGEGSAGAEKRVAASSATASASASAAASASASSPAGGGGE
ALELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAANSSGDGGAAGDGAVVDC
PVCKQQCFSKDIVENYFMRDSGSKAATDSQDANQQCCTSCEDNAPATSYCVECSEPLCET
CVEAHQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNA
HKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVK
MAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESD
NNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTN
STGPVPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSSDGE
VSGLMRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAVAAGQPGTA
PPGAPGAPPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMALAEGPGAEGPRLASPSG
STSSGLEVVAPEGTSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQ
DVPGEEWSCALCHVLPDLKEEDGSLNLDGGDSTGVVAKLSPANQQKCERVLLALFCHEPC
RPLHQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTE
DKADVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSAQDLSSGPGDGP
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctcggcggcggcagcggctgcctcaggcagcccgggc
ccgggagagggctcggcgggcgccgagaagcgcgtcgccgcctcctcggccacggcctcg
gcttctgcctcggcggcggcgtccgcatcggcatcgtcgcccgcggggggcggcggcgag
gcgctggaactgctggagcactgcggcgtgtgccgggagcgcctgcggcccgagagggaa
ccgcgcctgttaccctgcctgcactcggcctgcagcgcctgcctcgggcccgcggcgcct
gccgccgccaacagctcaggggacggaggtgcggcgggcgacggcgctgtggtggactgt
ccagtatgtaagcagcagtgtttctccaaagatattgtggagaattacttcatgcgcgac
agtggcagcaaggctgccaccgattcccaggatgcgaatcagcagtgctgcactagctgt
gaggataatgccccggccaccagttactgtgtggagtgctctgagccgctgtgtgagacg
tgtgtggaggcacaccagcgggtgaagtacaccaaggaccacactgtgcgttccactgga
ccagccaaatcgagggacggtgagcgcacggtgtattgcaacgtgcacaagcacgagccc
cttgtgctgttttgcgagagttgcgacaccctcacctgccgggactgccagctcaacgcc
cacaaggaccaccagtaccagttcctggaggatgctgtgaggaaccagcgcaagctcctg
gcctccctggtgaagcgcctcggggacaagcatgcgacattgcagaagaacaccaaggag
gttcgcagctcgatccgccaagtgtctgacgtacagaagcgcgtgcaggtggacgttaag
atggccatcctgcagatcatgaaggaactgaacaagcggggccgtgtgctggttaacgac
gcccagaaggtgactgaggggcagcaggagcgcctggagcgccagcactggaccatgacc
aagatccaaaagcaccaggaacacatcctgcgctttgcctcatgggctctggaaagtgac
aacaacactgctctgctactctccaagaagctgatctacttccagctgcaccgggccctc
aagatgatcgtggaccctgtggagccacacggtgagatgaagttccagtgggacctcaat
gcctggaccaagagtgcagaggcctttggcaagatcgtggcagaacgtcctggcaccaac
tccacaggccctgtacccatggcccctcctcgggctccagggcctttgagcaagcagggc
tctggcagcagccagcctatggaggtgcaggaaggctatggcttcgggtcagatgaccct
tactcgagtgcagagccccacgtgtcaggggtgaagcggtcccgctcaagtgatggtgag
gtgagtggcctcatgcgtaaggtgccacgggtgagcctcgaacgcctggacttggatctc
acggctgacagccagccaccagtcttcaaggtcttcccaggcagcaccactgaggattac
aacctcatcgtcattgagcgaggtgctgcagctgttgcagctggacagcctgggactgcg
cccccaggggcccctggcgctccgcccctgcctggcatggccatcgtcaaggaggaagaa
acagaggctgccattggggccccgcctgccgccactgagggccccgagaccaaacctgtg
ttgatggccctggccgagggccccggcgccgagggcccccgcctggcttcacccagcggc
agcaccagctcaggcctggaggtggtggcccctgagggcacctcagccccagctggtggc
ccaggtgccctggatgacagtgccaccatctgccgtgtctgccagaagccaggcgacctg
gtcatgtgcaaccagtgcgagttctgcttccacctggactgccacctgcctgccctgcag
gatgtgccaggggaggagtggagctgcgcgctctgccacgtgctacccgacctgaaggag
gaggatggcagcctaaacctggatgggggtgacagcactggtgtggtggccaagctctcg
ccagccaaccagcagaagtgtgagcgcgtcctgctggccctcttctgccatgagccctgc
cggcccctgcaccagctggctactgactccaccttctccctggatcagcccggcggcacc
ctggacttgacgctgattcgagcccgcctccaggagaagttgtcacccccctacagctcc
ccccaggagtttgcccaggatgtgggccgcatgttcaagcagttcaacaagctgacagag
gacaaggccgatgtgcagtccatcattggcctgcagcgcttctttgagactcgcatgaac
gaagcctttggtgacaccaagttctccgctgttctggtggagcccccgccgctgagcctg
cctggtgctggcctgagcgcccaggacctgtccagtggccctggtgatggcccctga
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