Lagenorhynchus albirostris (white-beaked dolphin): 132510468
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Entry
132510468 CDS
T10760
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132510468 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalb03021
]
132510468 (SF3B3)
03041 Spliceosome [BR:
lalb03041
]
132510468 (SF3B3)
03036 Chromosome and associated proteins [BR:
lalb03036
]
132510468 (SF3B3)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132510468 (SF3B3)
Spliceosome [BR:
lalb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
132510468 (SF3B3)
Complex B
132510468 (SF3B3)
Complex C
U2 SnRNP specific factors
132510468 (SF3B3)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
132510468 (SF3B3)
TFTC complex
132510468 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
132510468
NCBI-ProteinID:
XP_059988541
LinkDB
All DBs
Position
19:complement(47234031..47291119)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttctctggaaccaaacaacaggaaattgttgtttcccggggaaagatcttggagctg
cttcgccctgaccccaacaccggcaaagtacacactctactaactgtggaagtatttggt
gtcatccggtcactcatggcctttaggttgacaggtggcacaaaagactacattgtggtt
ggtagtgactcaggtcggattgttattctggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagcgccattgagaaacagaaattg
gtgtatatcttgaacagagatgctgcagcccggcttaccatttcatctccactggaggcc
cacaaagcgaacactttagtgtatcatgtggtcggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaactggggaagca
gcggctaatacccagcagacacttactttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggaaacttccttattacagttccgggg
gggtcagatggtccaagtggagtgctgatttgctctgaaaactacatcacctataagaac
tttggtgaccaaccagatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagacgaagtcaatgttcttc
tttttggcccaaactgagcagggagatatctttaagatcactttggagacagatgaagat
atggttaccgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttccttttcgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagatacattcttttttcagccaagaccactcaaaaaccttgtgctggttgatgag
ttggacagcctctctcccattttgttttgccagatagctgacctggccaatgaagacact
ccacagctatatgtggcctgtggtaggggaccgaggtcatctctgagggtcttaaggcat
ggacttgaggtatcagaaatggctgtctcagagctacccggtaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcttacatcattgtgtctttcgtgaat
gccacacttgtgttgtccattggagagactgtagaagaagtgactgactctgggtttctg
ggcactaccccaaccttgtcctgctccttgttaggagatgatgccttagtgcaggtgtat
cctgatggcattcggcacatacgagcagacaagagagtcaatgagtggaagactcctgga
aagaaaacaattgtgaaatgtgcagtgaaccaacgacaagtggtgatcgccctgacagga
ggagaactggtctattttgaaatggatccctcaggacagctgaatgaatacacagaacgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaacgtcccccctggagagcag
cggtctcgcttcctggctgtggggctggtggacaatactgtcagaatcatctccctggat
ccctcagactgtttgcaacctttgagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggactgagaagcaggatgagctgggtgagaggggctctatt
ggcttcttatacctgaatattgggctacagaatggtgtgttgctgagaacagtcctggac
cctgtcactggggatctgtctgacacccgcactaggtacctgggatcccgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaggaggcagtgttggccatgtcaagccgctcatgg
ttgagctattcttaccaatctcgtttccatctcacccccctgtcttacgagaccctggaa
tttgcatctggcttcgcctctgaacagtgccctgagggcattgtggccatctccaccaat
accctgaggattttggcattggagaagctgggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcatccaccctgaaagtaacaaccttatcatcatt
gagactgatcataatgcctacactgaggccacaaaagctcagaggaagcagcagatggca
gaggaaatggtagaagcagcaggggaggatgagcgagagctggctgcggagatggcagca
gcattcctcaatgaaaacctccctgagtccatttttggagctcctaaggctggcaatgga
cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacacactggaccttgtc
cagctggaacagaatgaagctgcttttagtgtggctgtgtgcaggttctccaacactggc
gatgattggtatgtgctggtgggtgtggccaaagacctgatactgaatccccgatctgta
gccgggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagcttctgcgagtctatgacctgggaaagaagaagttactccgaaag
tgtgagaacaagcatatcgccaattacatctctgggatccagacaattggacatagggta
attgtatctgatgtccaggaaagtttcatctgggttcgctacaagcgtaatgagaaccag
cttatcatctttgctgatgatacctacccccgatgggtcacaacagctagcctcctggac
tacgatactgtggctggggcagacaagtttggcaacatttgtgtcgtgaggctcccacct
aacaccaatgatgaagtggatgaggatcccactggaaacaaagccctgtgggaccggggt
ttgctcaacggggcctctcagaaggcagaagtgatcatgaactaccacgtgggcgagaca
gtactttcgttacagaagaccacgctgatccctggaggctcagaatcgcttgtctatacc
accttgtcaggaggaattggcatccttgtcccgttcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctccggtccgagcatccccctctctgtgggcgagaccac
ctcagttttcgttcctattacttccctgttaagaatgtgattgatggagatctctgtgag
caattcaactccatggagcccaacaaacaaaagaatgtctctgaggaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggactcgctacgccttctga
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