Lagenorhynchus albirostris (white-beaked dolphin): 132510680
Help
Entry
132510680 CDS
T10760
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03020
RNA polymerase
lalb03420
Nucleotide excision repair
lalb05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132510680 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
132510680 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
132510680 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalb03021
]
132510680 (POLR2A)
03400 DNA repair and recombination proteins [BR:
lalb03400
]
132510680 (POLR2A)
Enzymes [BR:
lalb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132510680 (POLR2A)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
132510680 (POLR2A)
DNA repair and recombination proteins [BR:
lalb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132510680 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
132510680
NCBI-ProteinID:
XP_059988848
LinkDB
All DBs
Position
20:complement(9120328..9140412)
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILSKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDVVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaaacgaatgtctgtgacagagggcggc
atcaaatacccagagaccaccgagggaggccgccccaagcttggggggctgatggatccg
aggcagggggtgattgagaggactggccgctgccaaacctgtgcaggaaacatgacagag
tgtcctggccactttggccacattgagctggccaaacctgtgttccatgtcggcttcctg
gtcaagacaatgaaagttttgcgctgcgtctgcttcttctgctccaaattgcttgtggac
tctaacaacccaaagatcaaggacattttgtctaagtccaaggggcagcccaagaagcgg
ctcacacacgtctatgacctctgcaagggcaaaaacatctgcgagggcggggaggagatg
gacaacaagttcggtgtggagcagcctgagggcgatgaggatttgaccaaagaaaagggc
cacggcggctgtgggcggtaccagccccggatccggcgctccggcctggagctgtacgca
gagtggaagcacgtcaacgaggactctcaggagaagaagatcctgctgagtcctgagcgg
gtgcacgagatcttcaaacgcatctcagatgaggagtgcttcgtcctgggcatggagcct
cgctatgcccggcccgagtggatgattgtcactgtgctgcccgtgcccccgctctccgtg
cggcctgctgttgtgatgcagggctctgcccgcaaccaggatgacctgacacacaaactg
gccgacatcgtgaagatcaacaatcagcttcggcgcaatgagcagaacggcgcggccgcg
catgtcatcgctgaggacgtgaagctcctccagttccacgtggccaccatggtggacaac
gagctgcctggcttgcctcgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcggttgaagggcaaggaaggccgggtgcgcgggaacctgatgggcaagcgggtggac
ttctcggcccgcactgtcatcacccccgaccccaacctctccattgaccaggttggcgtg
cctcgctccattgccgccaatatgacctttgcggagatcgtcacccccttcaacattgac
agacttcaggaactagtgcgcagggggaacagccagtacccaggggccaagtacatcatc
cgggacaacggtgatcgcattgacctgcgtttccaccccaaacccagtgaccttcacctg
cagactggctataaggtggaacggcacatgtgcgatggggacattgttatcttcaaccgg
cagccaactttgcacaaaatgtccatgatgggacatcgggttcgcatcctgccctggtct
acttttcgcttgaatcttagtgtgacaactccatacaatgccgattttgatggggatgag
atgaacttgcacctgccacagtccctggagacacgggctgagatccaggagctcgccatg
gtgccacgcatgattgtcaccccccagagcaatcgcccagttatgggcattgtgcaggac
acgctgaccgcagtgcgcaaattcaccaagagggacgttttcctggagcggggggaggtg
atgaacctcctgatgttcctgtccacgtgggacggcaaggtcccacagccagccatcctg
aagccccggcccctgtggacagggaagcagatcttctccctcatcatacccggccacatc
aactgtatccgcacccacagcacccatcccgatgatgaggatagtggtccttacaagcac
atctctcctggggacaccaaggtggtggtggagaacggggagctgatcatgggcatcctg
tgtaagaagtctttgggcacatcagctggctccctggtccacatctcttacctagagatg
ggtcatgacatcacccgcctcttctactccaacattcagactgtcattaacaactggctc
ctcattgagggtcataccattggcattggggactccattgctgattctaagacttaccaa
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcattgagaaggcg
cataacaacgagctggagcccaccccggggaacactttgcggcagacctttgagaaccag
gtgaaccgcattctcaacgatgcccgagacaagactggctcctctgcccagaaatccctg
tctgaatacaacaactttaagtcaatggtggtgtccggggctaaaggttccaagatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaagcggatcccgttt
gggttcaagcaccggactctgcctcacttcatcaaagatgactatgggcctgagagccgt
ggcttcgtggagaactcctacctggccggcctcacgcccaccgagttcttcttccatgcc
atggggggtcgtgaggggctcatcgacacagctgtcaagactgctgagactggatacatc
cagcggcggctgatcaaatccatggagtcggtgatggtgaagtatgacgccaccgtgcga
aactccatcaatcaggtggtacagctgcgctatggtgaagacggcctggcgggcgagagc
gttgagttccagaacctggctaccctcaagccttccaacaaggctttcgagaagaagttc
cgctttgattataccaatgagagggccctgcggcgcaccctgcaggaggatgtggtgaag
gacgtgctgagcaatgcacacattcagaacgagctggagcgagaatttgagcggatgcgt
gaggacagggaggtgctcagggtcatcttcccaactggtgacagcaaggttgtcctcccc
tgtaacctgctgcgcatgatctggaacgctcagaagatcttccacatcaaccctcgcctt
ccctctgacctgcaccccatcaaggtggtagagggtgtcaaggagctgagcaagaagctg
gtgattgtgaatggggatgacccactgagccggcaggcccaggagaacgccaccctgctc
ttcaacatccacctgcggtccacgctgtgctcccgccgcatggctgaagagtttcggctc
agcggagaggccttcgactggctgctcggagagatcgagtccaagttcaaccaagccatt
gcccatcctggggaaatggtgggagctctggctgcacagtcccttggagaacctgccacc
cagatgactctgaacaccttccactatgctggtgtgtccgccaagaatgtgacactgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccctcacttact
gtcttcctgctgggccagtctgctcgagatgctgagagagccaaggatattctgtgccgc
ctggaacatacaacgctgaggaaggtgactgccaacacggccatctactatgaccccaac
ccccagagcacggtggtggcagaggatcaggagtgggtgaatgtctactatgagatgcct
gactttgatgtggcccgaatctccccctggcttttgcgggtggagctggaccggaagcac
atgactgatcggaagctgaccatggagcagattgccgagaagatcaatgctggtttcggt
gatgacttgaattgcatctttaacgatgataatgcagagaagctggtgctccgtatccgc
atcatgaacagtgatgaaaacaagatgcaagaggaagaagaggtggtggacaagatggat
gacgacgtcttcctgcgctgcatcgagtccaacatgctgacagatatgaccctgcagggc
atcgagcagatcagcaaggtgtacatgcacttgccgcagacggacaacaagaagaagatc
atcatcacagaggacggggagttcaaggccttgcaggagtggatcctggagacggatggc
gtgagcctcatgcgggtgctgagcgagaaggacgtggaccctgtgcgcaccacgtccaac
gacatcgtggagatcttcacggtgctgggcatagaagccgtgcggaaggccctggagcgg
gagctgtaccacgtcatctccttcgatggttcctacgtcaattaccggcacttggctctc
ctgtgtgataccatgacctgtcgtggccacttgatggccatcacccgacacggagtcaac
cgccaggataccggacctctcatgaagtgctcctttgaggaaacggtggatgtgcttatg
gaagcagctgcacatggagagagcgaccccatgaagggggtgtctgagaacatcatgctg
ggccagctggctccagccggcactggctgttttgacctcctgctcgatgcagagaagtgc
aagtatggcatggagatccccaccaacatccccggcttgggggctgccggacccaccggc
atgttcttcggctcggcccccagtcccatgggaggaatttctccagccatgacaccctgg
aaccagggcgcaaccccagcctacggcgcctggtcccccagtgttgggagcgggatgacc
ccgggggcagcaggcttctctcccagtgctgcttcagatgccagtggcttcagccctggt
tactccccggcctggtctcccacgccgggttccccgggctcccctggcccctcaagcccg
tatattccctcaccagggggtgccatgtctcccagctactccccgacgtcgcctgcctac
gagccccgctcccctgggggctacacgccccagagtccctcttactcccccacttcaccc
tcctactcccctacgtctccatcctattctccaaccagccccaactacagccccacgtcg
cccagctactccccgacctcgcccagctactccccgacctcgcccagctactccccgacc
tcacccagctactccccgacctcgcccagctactccccgacctcacccagctactcgccc
acttccccaagctactcgcccacatcacccagctactcgccaacctctcccagctattcg
cccacctctcccagttactcgccaacttcacccagctactcacccacctcacctagctac
tctccgacatctccaagctattcgccgacttcaccaagctactcaccaacttccccaagt
tactcgcccaccagccctaactattctccaaccagtcccaattacaccccgacgtcaccc
agctatagcccaacatcccccagctactcacctactagtcccaactacacaccaacgagc
cccaactacagcccaacctctccaagctactctccgacctcacccagctactccccgacc
tcaccaagctactccccttcgagtccacgatacacaccacagtctcccacctataccccg
agctcacccagctacagccccagctcgcccagctacagcccgacttcaccgaagtacacc
ccaaccagtccttcctacagccccagctcaccggagtacaccccgacctctcccaagtac
tcacctaccagcccaaaatattcgcccacctcccccaagtactctccgaccagccccacc
tactcgcccaccactccaaaatactcgccgacgtctcctacttactcaccaacctctccg
gtctacaccccaacctcccccaagtactcacccaccagccccacctactcgcccacctcc
cccaagtactcacccaccagccccacctactcgcccacttcccccaaaggctcgacctac
tcgcccacctcccctggctactcgcccaccagccccacctatagcctcaccagcccagcc
atcagtcccgatgacagtgatgaggagaactga
DBGET
integrated database retrieval system
