Lagenorhynchus albirostris (white-beaked dolphin): 132511100
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Entry
132511100 CDS
T10760
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03013
Nucleocytoplasmic transport
lalb05014
Amyotrophic lateral sclerosis
Brite
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132511100 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF7344
DUF659
Motif
Other DBs
NCBI-GeneID:
132511100
NCBI-ProteinID:
XP_059989891
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Position
20:complement(10234726..10265277)
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AA seq
867 aa
AA seq
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MGFPGGAVVESPPADAGDTGSCPGLGGSHMPRSGWAREPWPLSLRVRSLCSTTGEATTVR
GPRTAKNKQTKRSDICEVCPTWIEGALLGLPGSLLDDWPKQWTAGSELAALSGGLSNWAD
ESCWAKMAAAEGAAGDGELWQAWLPDHAVFLRLREGRKNQSPASAEKPASLPSPPPLPPH
LLTRNLVLGLGGELFLWDGEGSSFLVVRLRDPSGAGEESSLSQYQRLLCINPPLFEIYQV
LLSPAQHHVALIGIKGLMILELPKRWGKNSEFEGGKSTVNCSTTPVAERFFTSSTSLTLK
HAAWYPSEMLDPHIVLLTSDNVIRIYSLREPQTPTKVIVLSEAEEESLILNKGRAYTASL
GETAVAFDFGPLSAVPKNIFGQKGKDEVLAYPLYILYENGETFLTYVSLLHSPGSVGKLL
GPLPMHPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWD
SRADLIPSLYVFECVELELALKLASGEDEPFDSDFSCPIKLHRDPKCPSRYHCTHEAGVH
SVGLTWIHKLHRFLGSDEEDKDSLQELATEQKCFVEHILCTKPLPCRQPAPIRGFWIVPD
ILGPTMICITSNYECLIRPLLSTVHPVSPPLLCTREDVEVAESPLRILAETPDSFEKHIR
SILQRSVANPAFLKSSEKDTAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLL
CDQKKKQLEDLNYCREERKSLREVAERLADKYEEAKEKQEDIVTRMKKVLHSFHSQLPVL
SDSERDMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQKPTITLSAYQRKCI
QSILKEEGEHIREMVKQINDIRNHVNF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggcttccctggtggcgcagtggttgagagtccgcctgccgatgcaggggacacgggt
tcgtgccccggtctgggaggatcccacatgccgcggagcggctgggcccgtgagccatgg
ccgctgagcctgcgcgttcggagcctgtgctccacaacaggagaggccacaacagtgaga
ggcccgcgtaccgcaaaaaacaaacaaacaaaaagaagtgacatttgtgaggtctgccca
acctggattgagggagccctgctcgggcttccgggctccctgctcgatgactggccgaag
cagtggacggctggaagcgaattggctgccctcagcggcgggctgagcaactgggctgac
gagagctgttgggccaagatggcggccgccgaaggagccgcgggagacggtgagctgtgg
caggcctggctccctgaccatgccgtgttcttgcggctccgggaaggacggaaaaaccag
agcccagcctcagccgagaagccggcttctttgccttcgccgccgcccctgccgccgcac
ttgctgacgagaaacctggtcttgggcctcggcggagagctcttcttatgggacggagaa
ggcagctccttcttagtcgtgcgccttcgggaccccagcggcgccggtgaggagtcctcc
ctctcccagtaccagagattgctttgcataaatccacccctgtttgaaatctatcaagtc
ttgttaagtccagcacaacatcatgtagcacttataggaataaaaggactcatgatatta
gaattacctaagaggtgggggaagaattctgaatttgaaggtggaaaatcaacagtgaat
tgtagcaccactcccgttgctgagagatttttcaccagttctacctctctgactctaaag
catgctgcctggtatccgagtgagatgctggacccccacatagtgctgttaacatcagac
aatgtaataaggatttactctctacgtgagccccagacacccactaaggtcattgtactt
tcagaagcagaagaggaaagtctaatactcaataaaggaagggcctacaccgcatctcta
ggagagacagcagttgcatttgactttgggccgttgtcagcagtcccgaagaacatattt
ggacaaaaaggcaaagatgaagtattggcttaccccctgtacatcttgtatgagaatgga
gagactttccttacatatgttagtctgttgcacagccctgggagtgtgggaaagctgtta
ggcccactgcccatgcatcctgcagctgaagataactatggttatgatgcgtgtgctgta
ctctgcttaccatgtgtccccaacatcttggtgattgctactgaatcaggaatgctgtat
cactgtgttgtgctggaaggggaagaagaagacgaccaaacatcagagaagtcctgggat
tccagggcagacctcattccttctctgtatgtgtttgagtgtgtggagttggagcttgcc
ctgaaactggcatctggagaggacgagccctttgattctgacttttcttgtccaatcaaa
cttcacagagatcccaagtgtccctcaagatatcactgtactcatgaagctggtgtacat
agtgttgggctaacttggattcataaacttcacagatttcttggatcagatgaagaagat
aaggacagtttacaggaactagctacagaacagaaatgctttgtagaacacattctttgt
acgaagccattgccatgcaggcagccagctccgatccgaggattctggattgtccctgac
attctggggcctacgatgatctgcatcaccagtaactacgaatgcctcataaggccttta
ctaagcacagtccatccagtgtctcctcccctgctttgtacccgagaggatgttgaagtg
gcagagtctcccctccgtattctggctgaaaccccggattcctttgaaaaacatattaga
agcattctgcaacgcagtgttgcaaatccagcatttttgaaatcatctgaaaaagatacg
gctcctcctcccgaagaatgccttcagctcatcagcagagccacccaggtgttcagagaa
cagtacattcttaaacaggacctggcaaaggaggagattcagcggagggtcaaattgtta
tgtgaccaaaaaaagaaacaactagaagatctcaattattgtcgagaggagaggaaaagt
ctgcgggaagtggccgagcgcttagctgacaaatatgaggaagccaaggaaaaacaagaa
gatatcgtgaccaggatgaaaaaagtacttcacagttttcactctcagctcccagttctc
tctgacagtgagagagacatgaagaaagaattacagctgatacctgatcaacttcgacat
ttgggcaatgccatcaaacaggttactatgaaaaaagactatcagcaacgaaagatggaa
aaggtactaagtcctcagaagcccaccattactctcagcgcctaccagcgaaaatgcatt
cagtccatcctgaaggaggagggtgagcacataagagaaatggtgaagcaaattaacgat
atccgaaatcatgtaaacttctga
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