Lagenorhynchus albirostris (white-beaked dolphin): 132511653
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Entry
132511653 CDS
T10760
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03030
DNA replication
lalb03420
Nucleotide excision repair
lalb03430
Mismatch repair
lalb03440
Homologous recombination
lalb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132511653 (RPA1)
03420 Nucleotide excision repair
132511653 (RPA1)
03430 Mismatch repair
132511653 (RPA1)
03440 Homologous recombination
132511653 (RPA1)
03460 Fanconi anemia pathway
132511653 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lalb03000
]
132511653 (RPA1)
03032 DNA replication proteins [BR:
lalb03032
]
132511653 (RPA1)
03400 DNA repair and recombination proteins [BR:
lalb03400
]
132511653 (RPA1)
Transcription factors [BR:
lalb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132511653 (RPA1)
DNA replication proteins [BR:
lalb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
132511653 (RPA1)
DNA repair and recombination proteins [BR:
lalb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
132511653 (RPA1)
MMR (mismatch excision repair)
132511653 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
132511653 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
132511653
NCBI-ProteinID:
XP_059991020
LinkDB
All DBs
Position
20:complement(13130502..13184354)
Genome browser
AA seq
617 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGVTAIKPILQVINIRPIATGNNPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVIILMELEVLKSGEEVGLKIGNPVPYNE
GQGQQPAVPPPVSAASPPASRPQQQNGSSGVGSTVSKTFGASKTFGKPGGTSLGNSSGAT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGVGDLENKPKDSLVDIIGICKSYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALAGVSISDLKSGGIGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLITSIRRNAAAM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagttacagcc
ataaaacccattctccaagtcattaacatccgtcccattgctacagggaataatccaccc
cgttatcgactgcttatgagtgatggattgaatactctgtcttctttcatgttggcaaca
cagttgaaccctcttgttgaggaagaacgattgtctagcaactgtatttgccagattaac
cgatttattgtgaacactctgaaagatggaaggagagtgattattttgatggagttagaa
gttttgaaatcaggtgaagaagttggattaaagattggcaatccagtgccctataatgaa
ggacaaggacagcagccagcagttcctcctccagtctcagcagccagtccaccagccagc
aggccccagcaacagaatgggagctcgggagtgggttctactgtatctaagacttttggt
gcctcaaagacatttggaaaacctggaggtaccagcctagggaacagctccggggcaaca
caggccaaagtggtacccattgccagcctcaccccttaccagtccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaaa
ctcttctctatagaactagttgatgagagtggcgaaatcagagcgactgctttcaacgag
caagcggacaagttctttcctcttattgatgtgaacaaggtctattacttctctaaaggc
accctgaagattgccaacaaacagttcacagccgtcaaaaacgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatggtcatcatttacccacagtccagttt
gatttcacaggggttggtgacctagagaacaagcctaaagactcacttgtagacataatc
ggaatctgcaagagctatgaagatgtcactaaaatcacagtgaagtctaacaacagagaa
gtctctaagaggaatatctatttgatggacatgtcagggaaagtggtgaatgctactctg
tggggagaagatgctgatagatttgatggttctagacaacccgtgatggcgatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcgagtaccgtcatt
gtgaaccctgacatcccagaggcctacaagcttcgtggatggtttgactcggaaggacaa
gccttagctggcgtttccatctctgatctaaagagtggaggaataggagggagcaacacc
aactggaaaactttatatgaggttaaatcagagaacttgggccaaggtgacaagcccgac
tattttagctctgtggcgacagtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggactgcaataagaaagtgattgatcaacagaatggattgtaccgctgc
gagaagtgtgacagtgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gctgactttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaagcactgcttatcttggggagttaaaagagaagaacgagcaagcgtttgaggaa
gttttccagaatgccaacttcagatcttttacgttcaggatcagggtcaaattggagacc
tacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gaatatggcagaaggctgatcacgagcatcaggagaaacgctgcggcgatgtga
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