KEGG   Lagenorhynchus albirostris (white-beaked dolphin): 132511687
Entry
132511687         CDS       T10760                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
  KO
K05236  coatomer subunit alpha
Organism
lalb  Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:lalb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lalb04131]
    132511687 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lalb04147]
    132511687 (COPA)
Membrane trafficking [BR:lalb04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    132511687 (COPA)
Exosome [BR:lalb04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   132511687 (COPA)
  Exosomal proteins of bladder cancer cells
   132511687 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 132511687
NCBI-ProteinID: XP_059991107
LinkDB
Position
2:70448613..70498720
AA seq 1233 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ENLKETFDPEKEAIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGVAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQETAEAQQLITICREYIVGLSMEIERK
KLPKESLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgctaaccaaattcgagaccaagagtgcgcgggtcaaaggactcagttttcaccccaaa
agaccctggatcctgaccagtttacacaatggggtcattcagttatgggactatcggatg
tgtaccctcattgacaagtttgatgaacatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgtctcttcacattgcttgggcacttagactacatccgcactacgttt
tttcatcatgaatatccttggattctgagtgcttcagatgatcagaccatccgagtgtgg
aactggcaatctaggacctgtgtctgtgtgttaacagggcacaatcattatgtaatgtgt
gctcagttccacccctcagaagacctggttgtatcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttgtctcctggtgcggtggagtcggat
gtgagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctggagggtcatgatcgtggagttaactgggctgccttccaccccactatgcccctcatt
gtatctggggcagatgaccgtcaagtgaagatctggcgcatgaacgaatcaaaggcatgg
gaagttgatacctgccggggccattacaacaatgtatcttgtgctgtcttccaccctcgc
caagagttgatcctcagcaattctgaagacaagagtatcagagtctgggacatgtctaag
cggactggggttcagaccttccgcagggaccatgatcgtttctgggtcctagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgggaacggccagcctatgctgttcatggcaatatgcttcattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtgttcaacatgtcgtacaatccagcagaaaatgcagtcctactgtgt
acaagagccagtaatttagagaatagtacctatgacttgtacaccatccccaaggatgcc
gactcccagaatcctgatgctcctgaagggaaacggtcctcaggcctgacagctgtttgg
gttgctcgcaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagattttttacgctggc
acaggcaacctcctgcttcgagacgcagaatccatcacgctctttgacgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgagcactcatgtcctttgcctcttacagccatt
gtgatctgtaaccgcaaactggaggctctatgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggggactatgggatcatccgaactctggatttacctatctatgtcaca
cgggtgaagggcaacaatgtatattgcctagacagagagtgtcgtcctcgggtgctcacc
attgatccaactgagttcaagttcaagctggccctgatcaacagaaaatatgatgaggta
ctacacatggtaaggaacgccaaacttgtaggccagtctatcattgcgtatctccagaag
aagggatatcctgaagtggcactgcacttcgtcaaagatgagaaaactcgctttagtctt
gcactggagtgtggaaacattgagattgctctggaagcagccaaagcactggatgacaag
aattgctgggaaaagctgggagaagtggccttactacaggggaaccaccagattgtggaa
atgtgttatcagcgcaccaaaaactttgacaaactttccttcttgtaccttatcactggc
aatctagagaaacttcgcaagatgatgaaaattgctgagatccgaaaggacatgagtggc
cattatcagaatgccctctacctgggagacgtgtcagagcgggtacggatcctgaagaac
tgtgggcaaaagtcactggcctatctcacagctgctacccatggtttagatgaagaagct
gagaacctgaaggagacatttgacccagagaaggaggcaatcccagacattgaccctaat
gccaagctgcttcagccacctgcacctatcatgccattggataccaattggcccttattg
actgtatctaaagggttctttgaaggctccattgccagcaaggggaagggaggagcactg
gctgctgacattgacattgacaccgttggtactgagggctggggagaggatgcggagctg
cagctggacgaagatgggtttgtggaggctacagaaggtttgggggatgatgctcttggc
aagggacaggaagaaggaggtggctgggacgtggaagaagatctggagcttcctcctgag
ctggatataccccctggtgtagctggtggggctgaggatgggttctttgtgccccccact
aagggaaccagcccaactcagatctggtgcaataactctcagcttccagttgatcacatc
ctggcaggctcttttgaaacagccatgcggctccttcatgaccaagtaggggtaacccag
tttggcccctacaagcaactgttcctgcagacctatgcccgaggccgtaccacctatcag
gctctgccctgcctgccctccatgtatggctaccctaatcgcaattggaaggatgcaggg
ctgaagaatggtgtaccagctgtgggcctgaagcttaatgacctcatccaacggttgcaa
ctgtgctaccagctcaccacagtgggcaagtttgaggaggctgtggaaaaattccgttcc
attttactcagtgtgccacttcttgttgtggacaataaacaggagactgcagaggctcag
cagctcatcaccatttgccgtgagtacattgtgggtttgtccatggagatagaaaggaag
aagctgcccaaagagtctctagaacagcagaagcgcatctgtgagatggcagcctatttc
acccactcaaacctgcagccagtgcacatgatcctggtgctgcgtacagccctcaacctc
ttcttcaagctcaagaactttaagactgctgccacctttgctcggcgcctgttggaactc
gggcccaagccagaggtggctcaacagacccgcaaaatcctgtctgcctgtgagaagaac
cccacagatgcctaccagctcaattatgacatgcacaacccttttgacatctgtgctgca
tcttatcggcccatctaccgtggaaagccagtggagaaatgtccactcagtggggcctgc
tattcgcctgagttcaagggtcagatctgcagggtcactacagtgacagagattggcaaa
gatgtgattggtttaaggatcagccctctgcagtttcgctaa

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