Lagenorhynchus albirostris (white-beaked dolphin): 132513238
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Entry
132513238 CDS
T10760
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03013
Nucleocytoplasmic transport
lalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132513238 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
132513238 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalb03019
]
132513238 (THOC2)
03041 Spliceosome [BR:
lalb03041
]
132513238 (THOC2)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132513238 (THOC2)
Spliceosome [BR:
lalb03041
]
Complex C
Other components
EJC/TREX
132513238 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132513238 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
132513238
NCBI-ProteinID:
XP_059993377
LinkDB
All DBs
Position
X:25458783..25562102
Genome browser
AA seq
1620 aa
AA seq
DB search
MAAATVLVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTSRDFQQALYELSCHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLTCLHLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNTTSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGN
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAIASV
QNGPGGGPSSSSVGSASKSDESSNEETDKSRERSQCGVKAVNKTSSATPKGNSSNGNSGS
NSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGGKDGKEKPKEERPNKDEKARETKE
RTPKSDKEKEKFKKEEKVKDEKFKTTVPNAESKSTQEKEREKEPSRERDIAKEMKLKENV
KGEKTPVSGSLKSPVPRSDIAEPEREQKRRKIDTYPSPSHSATVKVTAILPKVPLGSENY
ASSPVISIHFLQDSLIELKESSAKLYINHTPPPLSKSKEREMDKKDLDKSRERSREREKK
DEKDRKDRKRDHSNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKDKEKNKS
KSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgactgtcttggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca
acttctagagatttccagcaagctctttatgagttatcatgccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgccgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattaacatgtttgcatttagtttcagac
acagttctgaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaatttaatttgttaagagaagaaaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatactactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcatctttgtacagagttgcagcagtacttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtagaagctaagcagattgttagaaaacttacaatggttgtactgtcttcc
gataaaattgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagatcggtgattggcagcat
gcacagaacattatggatcagatgcctccatactatgcagcttcacataaactaatagcc
cttgctatttgcaagcttattcatataactattgagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtcct
cacctttctcacgatcccattttattcgcaaaagtggtgcggataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagagaagacggaagttatcctt
agctgcttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactgtggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttacaacagccatccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcgttgaattatgacgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggagagaatgaaacatgacgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaacta
gaggccatgactggtggagagcaactaaaagctgagggtggttactttggccagataaga
aacactaaaaaatcctcccagagattaaaggatgcactattagaccatgaccttgctctt
cctctctgtttgcttatggctcagcagaggaatggggtaatctttcaggaaggtggagag
aaacatttgaaactcgtgggaaagctctatgatcagtgtcatgataccctggtacagttt
ggtgggtttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt
gatgtgctctgtaatgaatttcacacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcacaccatatttcgtcaaagtatgatgaacttaaaaaatcagagaagggaaat
aaacagcaacataaagttcacaagtacattacatcatgtgaaatggtgatggctcctgtc
catgaagcagtggtttccttacatgtttccaaagtctgggacgacatcagccctcaattc
tatgccacattctggtcattgacaatgtatgaccttgcagttccacataccagctatgaa
cgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttcttgaa
gaagaaaagaagcagatggaacatgtacagcgagtgctacagagactgaaactggaaaag
gacaattggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgatataatttacacagtcgcaagctgtactgaaaatgaagctagtcgatatggg
agattcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatat
gaaaaggaatgtggaaattatccaggatttcttactatattacgggcaactggttttgat
ggtggaaataaagctgatcaattagactatgaaaattttcgacacgttgtacataaatgg
cattacaaactaaccaaggcatcggtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaggctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcaattgccagtgta
caaaatgggcctggcggtgggccttcttcatcgtcagtaggaagtgcatctaaatcggat
gaaagcagtaatgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagca
gttaataaaacttctagtgccacaccaaaagggaattcaagcaatggaaatagtggctct
aacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagagaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggcccgagtacttggtggtaaagatggt
aaagaaaaaccgaaggaagaacggccaaataaagatgaaaaagcaagagagacgaaggaa
agaacacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagttaaagat
gagaaattcaagaccactgtccccaatgcagaatcaaagtcgactcaagaaaaggaaaga
gagaaggagccatccagagaaagagatatagcaaaggaaatgaaattaaaggaaaacgtt
aaaggagagaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagatatt
gcagagcctgaaagggaacaaaaacgtcgcaaaattgatacctacccttctccatcacat
tccgcaacagtaaaggttacagccatacttcccaaagttcctctgggttctgagaactat
gccagctcacctgtcatctccattcattttctacaggacagtctcatcgaactcaaggag
tcttcagcaaagctctacattaatcatactcctccaccactgtccaagagtaaggagaga
gaaatggacaagaaagatttggacaagtcgagggaaagatccagagaaagagaaaaaaaa
gatgaaaaggacaggaaagaccggaaaagggatcactcaaacaatgaccgagaagtgcca
ccggacttaaccaagaggcggaaagaggaaaatggaacaatgggggtttcaaaacacaaa
agtgagagtccgtgtgagtctccttatccaaatgagaaagacaaggaaaaaaataagtca
aaatcgtcaggcaaagaaaaaggcggtgactcatttaaatctgaaaaaatggataaaatc
tcctctggtggcaaaaaggagtccaggcatgataaagaaaagatagaaaagaaagagaaa
cgggacagttcaggaggaaaggaagagaagaaacatcataagtcctcggacaagcacaga
taa
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