Lagenorhynchus albirostris (white-beaked dolphin): 132513693
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Entry
132513693 CDS
T10760
Symbol
SMARCA1
Name
(RefSeq) probable global transcription activator SNF2L1 isoform X1
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132513693 (SMARCA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lalb03036
]
132513693 (SMARCA1)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
132513693 (SMARCA1)
CERF complex
132513693 (SMARCA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
132513693
NCBI-ProteinID:
XP_059994207
LinkDB
All DBs
Position
X:20652421..20721234
Genome browser
AA seq
1070 aa
AA seq
DB search
MEPDTAAVAATVAASDATATIVVIEDEQPGPSTSKEEGAAAAATEATVAKEKGEKKKEKI
LSPFQLKLAAKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSP
LNMKLGRPRIKKDDKQSLISVGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKG
GPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVP
KSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVF
KKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPD
VFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLS
KMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEH
IVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEE
REDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQV
DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKM
AKEEMLQMIRHGATHVFASKESELTDEDITTLLERGEKKTAEMNERLQKMGESSLRNFRM
DTEQSLYKFEGEDYREKQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRP
PKQPNIQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDIPNPAVAQREEQKKIDGAEP
LTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSA
VFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGK
NYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLI
SLIEKENMEIEERERAEKKKRATKTPMSQKRKAESATESSGKKDVKKVKS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggagccggacaccgccgcagtggcagccaccgtggcagcctctgatgcgaccgccacg
attgtggtcatagaggacgagcagccggggccgtccacctctaaggaggagggagcggcc
gccgcggccaccgaagccaccgtggccaaggagaagggcgagaagaagaaggagaaaatc
ctttctccatttcaactcaaacttgctgctaaagcttctaaatctgaaaaggaaatggat
ccagaatatgaagagaaaatgaaagcagatcgagcaaagagatttgaatttttactgaag
cagacagaactttttgcacatttcattcaaccttcagcacagaaatctccaacatctcct
ctgaacatgaaattgggacgccctcgaataaagaaagatgacaagcagagcttaatttct
gttggagactaccgtcacaggcgcacagagcaagaagaagatgaagagctgctctcggag
agtcggaaaacatctaacgtgtgtgttagatttgaggtgtcaccttcatatgtgaaagga
ggaccactgagagattatcagattcgaggactgaactggttgatctctttgtatgaaaat
ggagtcaatggtattttggctgatgaaatgggccttggtaagactttacagacaattgct
ttgcttggttacctgaaacattaccgaaacattcctggacctcacatggttttagttcca
aagtcgactttacacaactggatgaatgaatttaagcgatgggtcccatctcttcgtgtt
atttgtttcgttggagacaaggatgcgagagctgcttttattcgtgatgaaatgatgcca
ggagagtgggatgtttgtgttacttcttatgagatggtaattaaagaaaaatctgtattc
aaaaagtttcactggcgatacctagtcatcgatgaggctcacagaataaagaatgaaaaa
tctaagctttcagagattgttcgtgagttcaagtcaactaaccgcttgctcctaactgga
acacctttgcagaataacctgcatgaactctgggcactactcaactttttattgcctgat
gtctttaattctgcagatgactttgattcttggtttgacactaaaaattgtcttggtgat
caaaaacttgtggaaagacttcacgcagttttaaaaccatttttgttacggcgtataaaa
actgatgtagagaagagcctgcctcctaaaaaggaaatcaagatttacttgggattgagt
aaaatgcagcgagaatggtatacaaaaatcctgatgaaagatattgatgttctaaactct
gctggcaaaatggacaagatgcggctcttaaacattctgatgcagcttcgaaagtgttgt
aatcacccttacctgtttgatggtgctgaacctggtccaccgtataccactgatgagcac
attgttagcaacagtggtaaaatggtagttcttgataaactgttggccaaactcaaggaa
cagggttcaagggttctcatttttagccagatgactcgcttgctggacattttggaggat
tattgtatgtggcgtggttacgagtattgtcgactggatggacaaaccccacatgaagaa
agagaggataaattcctagaagtggaattactgggtcaaagggaagcaatagaggccttt
aatgttcctaatagtagcaaattcatctttatgctgagtaccagggctggaggtcttgga
attaacttggcaagtgctgatgtggttatactatatgactcagactggaatccacaggtt
gatctacaagctatggatcgggcacatcgtatcggtcagaagaagccagtacgtgtattt
cgtctcatcaccgacaacaccgttgaagaaaggattgttgaaagagctgagataaaactg
agacttgactcaattgtcatacaacaaggaagacttattgaccaacagtctaacaagatg
gcaaaagaggaaatgttacaaatgatacgtcatggagccacccatgtttttgcttctaaa
gaaagtgagctgacagatgaagacattacaactcttctggaaagaggggaaaagaagact
gcagagatgaatgaacgcttgcagaaaatgggagagtcttctctgagaaattttagaatg
gacactgaacaaagtttgtacaagtttgaaggagaagattatagagaaaaacagaagctt
ggaatggtggaatggattgaacctcccaaacgagaacgcaaagccaactatgcggtggat
gcctacttcagagaggctttacgtgttagtgagccaaagattccaaaggctccacgacct
ccaaaacagccaaatattcaggattttcagtttttcccaccacgcttatttgagctcctc
gaaaaggaaattctttattataggaagaccataggctataaggtcccaaggaatcctgat
atcccaaatccagctgtggctcaaagagaggagcaaaaaaagattgatggagctgaacct
cttacaccagaagagactgaagaaaaggaaaaacttctcacacaaggattcacaaactgg
actaagcgagattttaatcagtttattaaagctaatgagaagtatggaagagatgacatt
gataatatagctcgagaggtggagggcaaatctcctgaggaggtcatggaatattcagct
gtattttgggaacgttgcaatgaattacaggacattgagaaaattatggctcaaattgaa
cgtggagaagcaagaatccaacgaaggatcagtatcaagaaagccctggatgccaaaatt
gcaagatacaaggctccatttcatcagttacgtattcagtatggaaccagcaaaggaaag
aactatactgaggaagaagatagattcttgatttgtatgttacacaaaatgggctttgat
agagaaaacgtgtatgaagaattaagacagtgtgttcggaatgctcctcagtttagattt
gactggtttatcaagtctagaaccgccatggaattccagagacgctgtaatactctgatt
tcattgattgagaaagaaaatatggaaattgaggaaagagagagagcagaaaagaagaaa
cgggcaactaaaactccaatgtcacagaaaagaaaagcagagtcagctactgagagctct
ggaaagaaggatgtcaagaaggtgaaatcctaa
DBGET
integrated database retrieval system
