Lagenorhynchus albirostris (white-beaked dolphin): 132516198
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Entry
132516198 CDS
T10760
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03040
Spliceosome
lalb05202
Transcriptional misregulation in cancer
lalb05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132516198
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
132516198
05205 Proteoglycans in cancer
132516198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lalb03041
]
132516198
03009 Ribosome biogenesis [BR:
lalb03009
]
132516198
Enzymes [BR:
lalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132516198
Spliceosome [BR:
lalb03041
]
Complex A
U1 snRNP components
U1 related factors
132516198
Complex B
132516198
Ribosome biogenesis [BR:
lalb03009
]
Eukaryotic type
Pre-60S particles
Helicases
132516198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
REC1
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
132516198
NCBI-ProteinID:
XP_059998587
LinkDB
All DBs
Position
2:complement(145433182..145435390)
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AA seq
613 aa
AA seq
DB search
MLGYSSDRDCTWDRGFCVPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARCTAQEGETYRRSKEITVRGHNCPKPVLNFYEANFPPNVMDVIARQNFTEPTAI
QAQGWPVALNGLDMVGVAETGSRKALSYLMPAIVHINHQPLLERGDGPICLVLAPTQELA
QQVQQVAAEYCRACCLKSTCIYGGAPKGPQIRYLERDVEICIATPGRLTAFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDXIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIHLMEEIMSEKVIKIIVFVETKRRCDELTRK
MRIDGWPVMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPDNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDHRDRYSVGKRGGFNTFRDRENYDXGYSSLLKRDFGAKTQNGVYSASDY
TNGSSGSNFVSAGIQSSFRTGNPTGTYQNAYDSTQQHGRNIPNMHNGMNQQAYAYPATTA
APIDYPMPIGYSQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttaggttattcgagtgaccgagactgcacctgggatcgagggttttgtgtccctcga
tttggaggaagtagggcagggccgttatctggaaagaagtttggaaaccctggggagaaa
ttggttaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggctaggtgtacagcgcaagagggagagacatacagaagaagcaag
gaaattacagttagaggtcacaactgcccaaagccagtactgaacttttatgaagcgaac
ttccctccaaatgtcatggacgtgattgcaaggcagaactttactgaacccacagctatt
caagctcagggatggccagttgctctaaatggattggatatggttggggtagcagaaact
ggatctaggaaggcgttgtcttatttgatgcctgccattgtccacatcaatcatcagcca
ctcctagagagaggagatggacctatttgcttggtgctggcaccaactcaggaactggcc
caacaggtacagcaagtagctgctgaatactgtagagcatgttgcttgaagtccacttgt
atttatggtggtgctcccaagggaccacaaatacgttatttggagagagatgtagaaatc
tgtattgcaacacctggaagacttactgcctttttagaatgtgggaaaaccaatctaaga
agaaccacctatcttgtccttgatgaagcagacagaatgcttgatatgggattcgaaccc
caaataaggaagattgtggattagataagacctgataggcaaaccctaatgtggagtgct
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatata
aacattggtgcactagaactgagtgcaaatcacaacattcttcagattgtggatgtgtgt
cacgatgtagaaaaggatgaaaagcttattcatttaatggaagagatcatgagtgagaag
gtgattaaaatcattgtttttgttgaaaccaaaagaagatgtgatgaactcactagaaaa
atgaggatagatgggtggcctgtcatgggtatccatggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaggctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattacattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctgataacataaagcaagtgagtgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaaattgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtaggggaggcatgaaggatgaccatcgggacagatactctgttggc
aaaaggggtggatttaatacatttagagacagggaaaattatgacnnaggttactctagt
ctgcttaagagagattttggggcaaaaactcaaaatggtgtttacagtgcttcagattac
accaatgggagctctggaagtaattttgtgtctgctggtatacagagcagctttaggact
ggtaatccaacagggacttaccagaatgcatatgatagcactcagcaacatggacgtaat
attcccaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactacagct
gcgcctattgattatccaatgccaataggatattctcaataa
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