Lagenorhynchus albirostris (white-beaked dolphin): 132517163
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Entry
132517163 CDS
T10760
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03273
Virion - Lassa virus and SFTS virus
lalb04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132517163 (PCDH1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
132517163 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lalb01009
]
132517163 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lalb04515
]
132517163 (PCDH1)
Protein phosphatases and associated proteins [BR:
lalb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132517163 (PCDH1)
Cell adhesion molecules [BR:
lalb04515
]
Cadherins
Protocadherins
132517163 (PCDH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_2
Ig_Cad99C_N
Cadherin_CELSR2_9th
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
132517163
NCBI-ProteinID:
XP_059999828
LinkDB
All DBs
Position
3:complement(118207880..118230933)
Genome browser
AA seq
1237 aa
AA seq
DB search
MDCRARGLRCPQAALLILEPARMGSLGRSPGPGGQRLLPPALLLALLLLLAPSPGHATRV
VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPEN
TNNGSLFSIPVASDRDAGPNGVASYELQVGPEAQGLFKLQVAEDQDGKQPQLIVMGNLDR
ERVDSYDLTIKVQDGGNPPRASTALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIDYTFHQVPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGTNPKSARAQVVVTVKDVNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVVAEVTASDADSGSNAE
LVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRENYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN
TSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEL
ERRHHGLHRLVVKVTDRGKPPRSGTALVHLYVNDTLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSSKVSKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS
PSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggactgcagggcccgcggcctgcgctgcccacaggcggccctcctgattctggaacct
gcccggatggggtccctggggcgcagcccaggccctggggggcaacggttgctgccgcct
gccttgctgctggcccttctgctgctgctggctccgtccccaggccacgccactcgggtg
gtgtacaaggtgccagaggagcaaccgcccaacaccctcattgggagcctcgcagccgat
tacggttttccagacgtgggccacctatacaaactagaagtaggcgccccgtacctgcgg
gtggatggcaagacaggcgacatctttaccacggagacctctatcgaccgcgaggggctc
cgagaatgccagaaccagctccctggtgagccctgcatcctggagtttgaggtgtctatc
acggacctcgtgcagaatggcagcccccggctgctagagggccagatagaggtccaggac
atcaatgacaacacgcccaacttcgcctcaccagtcatcacgctgcccatccccgagaac
accaacaatggctcactcttctccatcccagtggcttcggaccgcgatgctggccccaac
ggtgtggcatcctatgagctgcaggtggggcccgaggcccaggggctatttaagctgcag
gtggcagaggaccaggacggaaagcagccgcagctcatcgtgatgggcaacctggaccgg
gagcgcgtggactcttatgacctcactatcaaggtgcaggatggtggcaaccccccacgc
gccagcaccgccctgctgcgagtcactgtgctcgacaccaatgacaatgcccccaagttc
gagcggccgtcctacgaggctgagctgtctgagaacagccccataggacactcagtcatc
caggtgaaggccaatgactctgaccaaggtgccaacgcagagatcgactacacgttccac
caggtgcccgaggttgtgaggcgtcttctgagactggacaggaacacgggacttatcact
gtgcagggccccgtggaccgtgaggacctaagcaccctgcgcttctcggtgcttgccaag
gaccgaggcaccaaccccaagagtgcccgagcccaagtggtggtgaccgtgaaggacgtg
aacgacaatgcccccaccattgagatccggggcatagggctggtgactcaccaagacggg
atggctaacatctcagaggacgtggcagaagagacagctgtggccctggtgcaggtatct
gaccgagatgagggagaaaacgcagctgtcacctgtgtggtggcaggtgacgtgcccttc
cagctccgccaggccagtgagacgggaagtgacagcaagaagaagtacttcctgcagacc
accaccccgctcgactatgagaaggtcaaagactacaccatcgagattgtggccgtggac
tctggcaaccccccactctcgagcaccaactccctcaaggtgcaggtggtggatgtcaat
gacaacgcacctgtcttcacccagagtgtcactgaggtcgccttcccagaaaacaacaag
ccaggtgaagtggtcgccgaggtcactgccagcgatgccgactcgggctccaatgctgag
ctggtttactcgctggagcctgagccggctgccaagggcctcttcaccatctcacctgag
actggggagatccgggtgaagacatcccttgatagggaacagagggaaaactacgagttg
aaggtggtggcagccgaccggggcagccccagcctccaaggcacagccaccgtccttgtc
aacgtgctggactgcaatgacaatgaccccaagtttatgctgagtggctacaacttctca
gtgatggagaacatgccggcgctgagtccagtgggcatggtgacggtcattgatggggac
aagggggagaacgcccgggtgcagctcacggtggagcaggacaatggtgattttgttatc
cagaacggcacgggcaccatcctctccagcctgagcttcgatcgggagcagcaaagcacc
tataccttccagctgaaggcggtggacggcggcgtcccacctcgctcggcctacgttggc
gtcaccatcaacgtgctggatgagaatgacaacgcaccctttatcaccgccccttccaac
acctcccaccggctgctgaccccccagacccgtctgggcgagacggtcagccaggtgaca
gctgaggacattgactctggtgtcaacgctgagctgacctatagcatcgccggcggcaac
ccttacggactcttccagattgggtcgcattccggcgccatcaccctggaaaaggagctt
gagcggcgccaccatgggctgcaccgcttagtggtgaaggtcactgaccgcggcaagccc
cctcgctctggcacagccttggtccacctgtatgtcaatgacaccctggccaaccgcacc
ctgctggagaccctgctgggccacagcctggacacgccgctggacatcgacattgctggg
gatccggaatacgagcgctccaagcagcgcggcaacatcctgtttggcgtggtggcgggt
gtcgtggccgtggccttgctcatcgccctggccgtgctcgtgcgctactgccggcaacgg
gaggccaagagtggctaccaggctggcaagaaggagaccaaggacctgtatgcccccaag
cccagcagcaaagtttccaagggaaacaaaagcaagggcaagaaaagcaagtctcccaag
cccgtgaagccggtggaggacgaggatgaggccgggctgcagaaatccctcaagttcaac
ctgatgagcgatgcccctggggacagcccccgcatccacctgcccctcaactacccacca
ggcagccctgacctcggccgccactatcgctctaattccccactgccttccatccagctg
cagccccagtcaccctccgcctccaagaagcaccaggtggtgcaggacctgccaccagcc
aacactttcgtaggcactggggacacgacgtccacgggctctgagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgccgagtcacc
ttctccgccaccagccaggcgcaggagctgcaggacccgtcccagcacagttactacgac
agtggcctggaggagtctgagacgccgtccagcaagtcatcctcggggccccgactcggt
cccctggctctgcctgaggatcactatgagcgcaccacccccgatggcagcataggagag
atggagcaccccgagaacgacctgcgccctttgcctgacgtcgccatgacgggcacatgt
acccgggagtgcagcgagtttggccactccgacacgtgctggatgcctggccagtcgtct
cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccggaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca
cctgcagccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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