Lagenorhynchus albirostris (white-beaked dolphin): 132517166
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Entry
132517166 CDS
T10760
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lalb04515
]
132517166 (PCDH12)
Cell adhesion molecules [BR:
lalb04515
]
Cadherins
Protocadherins
132517166 (PCDH12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
NNH1
Motif
Other DBs
NCBI-GeneID:
132517166
NCBI-ProteinID:
XP_059999835
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All DBs
Position
3:complement(118276591..118289553)
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AA seq
1199 aa
AA seq
DB search
MMRLLPLLLGLWGPGGYLFLSGDCQEVATLTVKYQVSEEVPSGTVIGKLSQELGREERSG
RTGAAFQVLQLPQALPIQVDSKDGLLSTGRRLDREQLCRQQDPCLVSFDVLATGDLALIH
VEIQVLDINDHQPQFPKGEQELEISESASLRTRIPLDRALDPDTGPNTLHSYTLSPSEHF
ALDVIVGPDETKHAELVVVKELDREIHSSFDLVLTAYDSGNPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAAPGTLLINLTATDPDQGPNGEVEYFLSKHVPPEVLDTFSIDAK
TGQVILRQPLDYEKNPAYEVDVQARDLGPNPIPAHCKILIKVLDVNDNTPNIHITWASQP
SLVSEALPKDSFIALIMANDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNATLDR
EQWPQYTLTLLAQDQGPQPLSVRKQLSIQIGDANDNAPVFEKSRYQVSTRENNLPSLHLI
TIKAHDADLGVNGKISYHIQDSPVSHLVAIDSDTGEVTAQRSLDYEQMAGFEFLVIAEDR
GQPQLASSVSVWVSLLDANDNVPEVIHPVLSDGKASLSVLVNASTGHLLVPIETPNGVGP
AGTDMPPQATPSSRPFLLVTIVARDADSGANGELLYSIQSGNEAGLFVLSPHLGQLFINI
TNASSLTGSEWELEIVVEDRGSPSLQTRALLRVFFVTSVDHLRDSAREPGALSTSVLTVI
CLVVLLAISGLILALIMSICRTEKKDNRAYNCREAESTYRHQPKRPQKHIQKADIHLVPV
LRGQVDEPGEAGQPPKHVGKEAMMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGTLAESRE
VLQDTVNLLFNHPRQRNASRENLNLPEPQPATGQPRSRPLKVAGSPTGRVPGDQGSKEAP
LSPPASSATLRRQRNLHGKVAPEKESGPRQILRSLVRLSVAAFAERNPVEELTVDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPGGSRSAIPDTDGPGARAGGQAEPDQEEGPLD
PEEDLSVKQLLEEELSNLLDPYTGLALDRLSVPDPAWMARLSLPLATNYRDNVFSPDAAT
SEEPRTFQTFGKAPGPELSPTGTRLASTFLSEMSSLLEMLLEQRPAVPVEAASEVLRRLS
VCGRTLSLDLATSGASGSEGPGGRSGKKGAEGRTSSGGSSRDLWIQEPGAPGDVRKPRP
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacttctgccacttctgctgggactttgggggccaggtggctacttgttcctt
tcaggggattgtcaggaggtcgccactctcactgtgaaatatcaagtgtcagaggaagta
ccgtccggcacagtgatagggaagctgtctcaggaactgggccgggaggagaggtctggg
cgaacaggggctgccttccaggtcttgcagctgcctcaggcgctccccatccaggtggac
tccaaggacggcctgctcagcacggggaggcggctggaccgggagcagctttgccggcag
caggacccctgcctggtttcctttgacgtgcttgccacaggggatttggctctcatccac
gtggagatccaggtgctggacatcaacgaccaccagcctcagtttcccaaaggtgagcag
gagctggaaatctctgagagcgcctccctgcgcacccggatccccctggacagagctctg
gacccagacactggccccaatactttgcactcctacaccctgtctcccagcgagcatttt
gccctggatgtcattgtggggcccgatgagaccaaacacgcggaacttgtggtggtgaag
gagctggaccgggaaatccactcatcttttgatctggtgttaactgcctatgacagtggg
aacccccccaagtcaggcaccagcttggtcaaggtcaatgtcctggactccaatgacaat
agccctgtgtttgctgagagctcgctggcactggaaatccaagaagacgctgcccctggt
actctcctcataaacttgactgccacagaccctgatcaaggccccaacggggaggtggaa
tacttcctcagtaagcacgtgcctccagaggtgctggacaccttcagtattgatgccaag
acaggccaggtgattctgcgtcaacccctagactatgagaagaatcctgcctacgaggtg
gatgtccaggcaagggacctgggtcccaatcccatcccagcccactgcaaaattctcatc
aaggtcctggatgtcaatgacaacaccccaaacatccacatcacgtgggcctcccaacca
tccctggtgtccgaagctcttcccaaggacagtttcattgctctcatcatggcaaatgac
ctagactcaggaaacaacggcctggtccactgttggctgagccaagagctgggccacttc
aggctgaagaggaccaatggcaacacatacatgctgctaaccaatgccacgctggacaga
gagcagtggccgcaatacaccctcactcttttggcccaagaccaaggaccccagccctta
tcagtcaggaaacagctcagcattcagatcggtgatgccaacgacaacgcacctgtgttt
gagaaaagcaggtaccaggtctccactcgggaaaacaacctaccctctcttcacctcatt
accatcaaggcccatgatgcagatctgggcgttaatgggaaaatctcataccacatccag
gactccccggtttctcacttggtagctattgactcagacacaggcgaggtcaccgctcag
aggtcactggactatgaacagatggccggcttcgagttcctggtgatcgcagaggacagg
gggcagccccagcttgcatccagtgtctctgtgtgggtcagcctgctggatgccaatgat
aatgtcccagaggtgattcaccccgtgctcagcgatgggaaagccagtctctcggtgctt
gtaaatgcctccacaggtcacctgctggtgcccattgaaactcccaatggcgtgggtcca
gcaggcactgacatgccaccacaggccacccccagctcccggccattccttttggtgacc
atcgtagcaagagatgcagactcgggggcaaatggagagctcctctacagcattcagagt
gggaacgaagccggtctctttgtcctcagcccccacctggggcagctgttcatcaacatc
accaatgccagcagcctcactgggagtgagtgggagctggagatcgtggtggaagaccgg
ggcagcccctccttacagacccgggccctgttgagggtcttctttgtcaccagtgtggac
cacttgagggactcagcccgtgagcctggggctctgagcacatcggtgctcacggtgatt
tgcctggtcgtactgctggccatctccgggttgatcttggctctgattatgtccatttgc
cggacggagaagaaggacaacagggcctacaactgtcgggaggccgagtccacctaccgt
caccagcccaagaggccccagaaacacatccagaaggcggacatccacctcgtgcccgtg
ctcaggggccaggtggatgagcctggcgaagctgggcagccccccaagcacgtgggcaag
gaagcgatgatggaagcaggctgggacccctgcctgcaggccccctttcatctcacaccg
accctgtacaggactctgcgtaaccaaggtaaccagggaacgctggccgagagccgagag
gtgctgcaggacactgtcaacctccttttcaaccatcccaggcagaggaatgcctcccgg
gagaacctgaaccttcccgagccccaacctgcgacgggccagccccgctcaaggcccctg
aaggttgcgggcagccccacagggagggtgcctggggaccagggcagtaaggaggccccg
ctgagcccaccggcctcctctgcaaccctgaggcggcagcggaatctccatggcaaagta
gcccctgagaaagagtcaggcccccgtcagatcctgcggagcctggtccggctgtctgtg
gctgcctttgcggagcggaaccccgtagaggagctcactgtggattcgcctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccggcggcagcaggagtgcaatcccagacacagat
ggcccaggtgccagggctggtggccaggcagaaccagatcaggaggaagggcccttggac
cctgaggaggacctctctgtgaagcagctgctagaagaagagctgtcgaacctgctggac
ccctacacaggcctggccctggaccggctgagcgtccccgatccggcctggatggcaaga
ctctctttgcccctcgccaccaactaccgtgacaacgtgttctccccggacgctgcgacc
tcggaggagcccaggaccttccagacgttcggcaaggcgccggggcccgagctgagcccg
acgggcacgcggctggccagcaccttcctgtcggagatgagctcactgttggagatgctg
ctggagcagcgccccgccgtgccggtggaggccgcctccgaggtgctgcggcggctctca
gtctgcggaaggaccctgagtctagacctagccaccagcggggcctcgggctcggaaggc
cctgggggccgatctggaaagaagggggccgagggcaggaccagcagcggcggcagcagc
agggacctgtggatccaggaaccaggggccccgggagatgttaggaagcccaggccctga
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