Lagenorhynchus albirostris (white-beaked dolphin): 132517628
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Entry
132517628 CDS
T10760
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04136
Autophagy - other
lalb04140
Autophagy - animal
lalb04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
132517628 (ATG4D)
04140 Autophagy - animal
132517628 (ATG4D)
04136 Autophagy - other
132517628 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lalb01002
]
132517628 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lalb04131
]
132517628 (ATG4D)
03029 Mitochondrial biogenesis [BR:
lalb03029
]
132517628 (ATG4D)
Peptidases and inhibitors [BR:
lalb01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
132517628 (ATG4D)
Membrane trafficking [BR:
lalb04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
132517628 (ATG4D)
Mitochondrial biogenesis [BR:
lalb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132517628 (ATG4D)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
132517628
NCBI-ProteinID:
XP_060001166
LinkDB
All DBs
Position
3:complement(164109375..164115593)
Genome browser
AA seq
473 aa
AA seq
DB search
MNSVSPAAAQYRSGSQEDARSPEGRRPRRPRTPDPNGLGPSGASGPALASSGTGPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFVSRLW
FTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWSLGAGLGPPEPSR
LASPNRYRGPAHWMPPRWAQAAPEPEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGK
KAGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVV
ILVPVRLGGETLNPVYVPCMKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQ
PTVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSA
TERYPMFTLVEGHAQDHSLDDLCSQPSQPTLRLPRTGRLLKAKRPSSDDFVFL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgcagctcagtaccggagcggcagccaggaggacgcgcgc
agccccgagggccgcaggccacggcgcccccgaaccccggaccccaacggcctggggccc
tccggagccagcggccccgctcttgcgtcgtccgggaccggcccgggggagccggacgaa
gtggacaagtttaaagcgaagttcctgacagcctggaacaacgtcaagtacggttgggca
gtcaaaagccggaccagctttagcaagatctctagcgtccatctctgtggccgccgctac
cgcttcgagggcgagggtgacatccaacgtttccagcgggactttgtatctcgcctatgg
tttacataccgccgggacttcccacctctcgccgggggctgcctgacctccgactgtggc
tggggatgcatgttacggagtgggcagatgatgctagctcaggggctgctgctgcacttc
ctgcccagagattggacgtggtccctgggcgcgggcctgggtcccccggagccatcgagg
ttggcctctcccaaccggtaccgtgggcctgcccactggatgcctccgcgctgggcccag
gctgcccctgagccggagcaggagcgccggcaccggcagattgtatcctggttcgctgac
catccccgggcccccttcggcctacaccggctggtggagcttgggcagagctcgggcaag
aaggcgggtgactggtatgggccgtccctggtggcgcacatactcaggaaagctgtggag
agctgctcagaggtcacccgcctggtggtgtacgtttctcaggactgcacagtgtacaag
gcggatgtggcacgcctggtggccaggccagaccccacagctgagtggaaatccgtggtc
atcctggtgccagtgcggctgggtggtgagactctcaaccccgtgtacgtgccctgcatg
aaggagctcctgcgttcagagctgtgccttggcatcatggggggcaagccacgccactcg
ctgtacttcattggctatcaggatgacttcctcctctacctggaccctcactactgccag
cccactgtggatgtcagccaggctgacttccccctagagtccttccattgcacctcaccc
cgcaagatggcctttgccaagatggacccgagctgtactgtggggttctatgctggagac
aggaaggagtttgagacgctctgctcagagctgaccagggtcctcagctcctcctcagcc
acagagcgataccccatgttcaccctggttgagggccatgctcaggaccacagcctggac
gacctctgctcccagccctcccaacccacactgcggctccctcgcacaggccggctcctc
aaggcaaaacgcccaagctctgacgactttgtgtttttataa
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