Lagenorhynchus albirostris (white-beaked dolphin): 132519590
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Entry
132519590 CDS
T10760
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04140
Autophagy - animal
lalb04148
Efferocytosis
lalb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132519590 (VPS18)
04148 Efferocytosis
132519590 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132519590 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lalb04131
]
132519590 (VPS18)
Membrane trafficking [BR:
lalb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132519590 (VPS18)
Hops complex
132519590 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
CNH
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
132519590
NCBI-ProteinID:
XP_060003471
LinkDB
All DBs
Position
1:84581653..84598434
Genome browser
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTRQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDSTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAHTERAVFRYQVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEAHQEEALAEFLQRKLASL
KPAERTQATLLTAWLTELYLSRLGALQGDPEALNLYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHHACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAATGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctggatgaatacgaggactccctctcccgctcggccgtcttgcagccc
ggctgccccagcgtcggcatcccccactcggggtatgtgaatgcccagctagagaaggaa
gtgcccattttcacgaggcagcgcattgactttaccccttctgagcgtatcaccagtctt
gtcgtctcctgcaatcagctctgcatgagcctgggcaaggatacactactccgcattgac
ttaggcaaagcaaatgaacccaaccacatggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggactctactggctctcacctgctgattgctctgagcagcactgag
gtcctctacgtgaaccgtaatggacagaaagttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaacaaggccctgggtactgagagcagcacaggccccatc
ctggtcggcactgcccaaggtcagatctttgaagcagagctctcggccagcgagggtggg
cttttcggccctgccccggatctctacttccgtccgttgtatgtgctaaacgaagaaggg
ggcccagcacctgtgtgctccctcgaggcggagcggggccctgaagggcgtgggtttgtc
atcgccaccactcggcagcgcctcttccagttcataggccgagcagccgagggagctgag
gcccagggcttctcagggctctttgctgcctacactgaccacccacccccattccgtgag
ttccccagcagtctgggctacagtgagttggccttctacacccccaagttgcgctctgcg
ccccgggccttcgcttggatgatgggggatggcgtgttgtatggctcgttggactgcggg
cgtcccgactccctgctgagcgaggagcgggtctgggagtacccagagggggtgggtcct
ggggccagcccacccctggccatcgtcctgacccagttccacttcctgctgctgctggcg
gaccgggtggaggcagtgtgcacgctgacggggcaggtggtgctgcgggaccacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacaggccacctgtgggcc
cacaccgagcgggccgtcttccgctaccaggtacagcgggaggcccgggatgtctggcgc
acctacctggacatgaaccgcttcgacctggccaaagagtattgtcgagagcggcctgac
tgcctggacacggtcctggcccgggaggccgacttctgcttccgccagcatcgttacctg
gagagtgcccgctgctacgccctgactcagagctactttgaggagattgccctcaagttc
ttggaggcccaccaggaggaggcgctggccgagttcctgcagcgaaaactggccagtttg
aagcctgctgagcgcacccaggccacgctgcttaccgcctggctgacggagctctacctg
agccgactcggggccctgcagggtgaccctgaggccctgaacctctaccgggaaacccgg
gagcgtttccgcgccttcctaagcagcccccgccacaaggagtggctcttcgccagccgg
gcctccatccacgagctgctcgccagccacggggacacagagcacatggtatacttcgct
gtgatcatgcaggactacgagcgcgtggtggcataccactgccagcatgaggcctacgag
gaggccctggctgtgctggcccgccaccgtgacccccagctcttctacaagttctcaccc
atcctcatccgtcacatccctcgccagctggtggacgcctggattgagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccagggtggcgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaatgtactgggcgagactgag
caggccattcacaattacctgctgtcgctctatgcccgaggccagccagcctcgctgctg
gcctacctcgagcaggccggggccagcccacaccgggtacattatgacctcaagtacgcg
ctgcggctctgtgctgagcatggccaccaccatgcttgcgtccatgtctacaaggtcctg
gagctgtatgaggaggctgtggacctggccctgcaggtggacgtggacctggccaagcag
tgtgctgacctgcccgaggaagatgaggagctacgcaagaagctgtggctgaagattgct
cggcatgtggtgcaggaggaggaggatgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagatcgaggacgtgctgcctttcttccctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcgctgaaggcttacaaccaccacatccaagagctgcag
cgggagatggaagaggccacggccagtgcccagcgcatccggcgagacctgcaggagctg
cggggccgctatggcactgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccacatgttccacgctgactgcctgttg
caggccgtgcggcctggcctgccggcctacaagcaggctcggctcgaggagctacagcga
aagctgggcgccgctccaccccctgccaagggctctgcccgggctaaggaggccgagggg
ggcgctgccaccggggggcccagccgggaacagctcaaggctgacctggatgaactggtg
gccgctgagtgcgtgtactgtggggagctgatgatccgctctattgaccggcccttcatc
gaccctcagcgctacgaggaggagcacctcagttggttgtag
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