Lagenorhynchus albirostris (white-beaked dolphin): 132519912
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Entry
132519912 CDS
T10760
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132519912 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lalb01009
]
132519912 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lalb04515
]
132519912 (PCDH7)
Protein phosphatases and associated proteins [BR:
lalb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132519912 (PCDH7)
Cell adhesion molecules [BR:
lalb04515
]
Cadherins
Protocadherins
132519912 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Mid2
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
132519912
NCBI-ProteinID:
XP_060004365
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All DBs
Position
4:complement(91741864..92190189)
Genome browser
AA seq
1255 aa
AA seq
DB search
MLRMRTMGWARAWCLGCCLLLPLSVSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGSSGGEGRRAGPADSAPYPGGGGNGASGGGPGGSKRRLDAPEGGGGTSTGGR
SSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITD
VNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRL
DETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKI
GRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQ
NKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQSVV
EVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDVLVNTVLDRE
QTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGM
VTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDP
PRSATATVSLFVMDENDNAPTVTLPRNVSYTLLPPSSNVRTVVATVLATDSDDGINADLN
YSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVN
ESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVM
ARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKRNKKSKQPLYSSIVTVEASKPN
GQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQA
VQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGSLQ
SCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVAL
TGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDR
NRNLLNKKLTSSYETFSAASFSKNEEANTEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccatgggatgggcgcgcgcctggtgcctgggctgctgtctcctc
ttgccgctctcggtaagcctggcggccgccaagcaactcctccggtaccgactggccgag
gagggcccagcagacgtccgcatcggcaacgtcgcttcggacttgggcatcgtgaccggc
tccggtgaggtgactttcagcctcgagtcgggctcggagtacctgaagatcgacaacctc
accggcgagctgagtaccagcgagcggcgcatcgaccgcgagaagctaccccagtgtcag
atgatcttcgacgaaaacgagtgcttcctggacttcgaggtatcggtgatcgggccctcg
cagagctgggtggacctgttcgagggtcgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtcgcccgtgctcacgctcacggtggaggagaaccggccagtgggcact
ctctacctgctgcccactgccaccgaccgtgatttcggccgcaacggcatcgaacgctac
gagctgcttcaggaacccgggggcggcagcagcggcggcgagggccggcgcgccgggcct
gcagacagcgccccctaccccgggggcggcgggaacggcgcgagcggcggcggcccgggt
ggttccaagaggcggctggacgcaccagagggcggcggcgggaccagcaccggcggccgc
agcagcgtgttcgaactgcaggtggctgacaccccggatggcgaaaagcagccgcagctg
atcgtgaagggggcgctggaccgcgaacagcgagactcctacgagttgaccctgcgtgta
cgcgacggtggcgacccgcctcgctcctcccaggccatcctgcgggtacttatcacagac
gtgaacgacaacagtccccgcttcgagaagagcgtgtacgaggctgacctggcggagaac
agcgccccggggacccccatcctgcagctgcgtgccgccgacctggacgtgggggtcaac
gggcagatcgagtacgtgttcggggcggctaccgagtccgtgcggcgcctgctgcgcctc
gacgagacgtccggctggctcagtgtcctgcaccgtatcgaccgcgaggaagtgaaccag
ctgcgcttcaccgtcatggcccgcgatcgcgggcagccccccaagaccgacaaggccacg
gtggtccttaatatcaaggacgagaacgacaatgtgccgtccattgaaatccgcaagatc
gggcgtatcccactaaaggacggggtggccaacgtggccgaggacgttctggtcgacact
cccatcgccctggtacaggtgtctgaccgagaccaaggcgagaacggagtggtcacctgc
accgtggtgggcgatgtgcccttccaactcaagccggccagtgacacagagggcgaccag
aacaagaaaaagtacttcctgcacacctcggcccctttggactatgagaccacccgggag
ttcaacgtggtcatagtggcggtggactcgggcagtcccagcctctccagcaacaactcc
ctgattgtcaaggtgggagacaccaatgacaacccgcccgtcttcggtcagtcggtggtg
gaggtatattttcccgagaacaacatccctggcgagagggtagccacggtgctggcgaca
gacgcagacagcgggaaaaacgctgaaatcgcctactcgctggactcttccgtgatgggg
atctttgccatcgacccagattctggggacgtcctcgtcaatacggtgctggaccgcgag
cagactgacaggtatgagtttaaagttaacgccaaagacaaaggcatcccggtgctacag
ggcagcaccacagtgattgtgcaggtggctgacaagaatgacaatgaccctaagtttatg
caggacgtctttaccttttatgtgaaagaaaacttgcagcccaacagtcccgtgggaatg
gtcacagtgatggatgctgacaaggggcgcaatgcggagatgagtctgtacatagaggag
aacagtaacattttttccattgaaaatgacacggggaccatttactccacaatgtctttt
gaccgggaacatcagaccacatacacattcagagtcaaggctgtggatgggggagatcct
cccagatccgcaacagctacagtctctctctttgtgatggatgagaatgacaatgccccc
acagttacccttcccagaaacgtttcctacactttactgccaccttcaagtaatgtcagg
acagtagtagctacggtgttggcaacagacagcgatgatggcatcaatgcagaccttaac
tacagcattgtgggagggaatcccttcaagctgtttgagattgattccaccagtggtgtg
gtttccttagtgggaaaactcacccaaaagcattatggcttgcacagattggtggtgcaa
gtgaatgatagtgggcagccttcccagtctaccacgactctggtgcatgtgtttgtcaat
gaaagtgtttctaatgcaactgtgattgactcccagatagccagaagtttgcacacccca
ctcacccaggatatagccggtgacccaagctatgaaataagcaaacagagactcagtatt
gtcattggggttgttgctggaattatgacggtgattctaatcatcttaattgtagtgatg
gcaagatattgccggtccaaaaataaaaatggctatgaagccggcaaaaaagatcacgaa
gacttttttacaccgcaacagcatgacaaatctaaaaagcctaaaaaggacaagagaaac
aaaaaatctaagcagcctctctacagcagcattgtcactgtagaagcttctaaaccaaat
ggacagaggtatgatagtgtcaatgagaagctgtcagacagcccaagcatgggccgatac
cgatcagttaacggtgggcctggcagtcctgacctggccaggcattacaaatctagttcc
ccattgcctactgtccagcttcacccccaatcaccaactgcaggaaaaaaacaccaggcc
gtacaagatctaccaccagctaacacatttgtgggagcaggagacaacatttcaattgga
tcagatcactgctctgagtacagctgtcaaaccaataacaagtacagcaaacagccattt
cgtagagtgacgttttctgttgtgagtcagccccaggacccacatcaggggtcactgcag
agttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcaggg
ccaaggctgggtgcccttccactcccagaggacaactatgaaaggaccacgccggatggc
agtgttggtgaggcagagcatatggaaaatgattcaagacctcttccagatgtagcccta
actgggaagtgtacccgtgagtgtgatgagtatggccactcagactcctgctggatgccc
gtccgcacttctccggagaggaagaagagccagcccaaactatctactttcatgcctgtt
gatgaacgaggaagccaggaaaagctggccaatggcgaagccgccatcatgggcgaccgc
aacagaaacctcctgaacaaaaagttgacctcatcctatgagaccttcagtgcagctagt
ttcagcaaaaatgaggaagccaacactgaggatattccccttacaaaaacgggggaatac
aagccatctcctgtcaatactctcactagaagagaagtttacctgtag
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