Lagenorhynchus albirostris (white-beaked dolphin): 132520502
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Entry
132520502 CDS
T10760
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04390
Hippo signaling pathway
lalb04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
132520502 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
132520502 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lalb03000
]
132520502 (SOX2)
Transcription factors [BR:
lalb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132520502 (SOX2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132520502
NCBI-ProteinID:
XP_060005231
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All DBs
Position
5:60535227..60536482
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AA seq
325 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYS
MMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGT
PGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRL
HMSQHYQSGPVPGTAINGTLPLSHM
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggc
aaccagaagaacagcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcc
cgcgggcagcggcgcaagatggcccaagagaaccccaagatgcacaactcggagatcagc
aagcgcctgggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgac
gaggccaagcggctgcgagcgctgcacatgaaggaacacccggattataaataccggccc
cggcggaaaaccaagacgctcatgaagaaggataagtacacgctgccgggagggctgctc
gccccgggcggcaacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggc
gtgaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagc
atgatgcaggaccagctgggctacccgcagcacccgggcctcaacgcgcacggcgccgct
cagatgcagcccatgcaccgctacgacgtgagcgccctgcagtacaactccatgaccagt
tcgcagacctacatgaacggctcgccgacctacagcatgtcctattcgcagcagggcacc
cctggcatggctcttggctccatgggctcggtggtcaagtccgaggccagctccagcccc
cccgtggttacctcttcttcccactccagggcgccctgccaggccggggacctccgggac
atgatcagcatgtacctccccggcgccgaggtgccggagcccgccgcccccagcagactt
cacatgtcgcagcactaccagagcggcccggtgcccggcacggccattaacggcacactg
cccctctcgcacatgtga
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