KEGG   Lagenorhynchus albirostris (white-beaked dolphin): 132520877
Entry
132520877         CDS       T10760                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
lalb  Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:lalb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lalb04121]
    132520877 (HLTF)
   03400 DNA repair and recombination proteins [BR:lalb03400]
    132520877 (HLTF)
Enzymes [BR:lalb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132520877 (HLTF)
Ubiquitin system [BR:lalb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132520877 (HLTF)
DNA repair and recombination proteins [BR:lalb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    132520877 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_UBOX zf-RING_2 ResIII zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 HDA2-3 zf-C3HC4_4 zf-Nse zf-rbx1 SURF2 Prok-RING_4
Other DBs
NCBI-GeneID: 132520877
NCBI-ProteinID: XP_060005640
LinkDB
Position
5:18234972..18294691
AA seq 1008 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPDNPYDKNAIKVNNVNGNQVGHIKKDLAAALA
YIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGF
SLESGWGSGRAGPSYSMPVHAAVQITTEQLKTEFDKLFEDLKEDDKTQEMEPAEAVETPL
LPHQKQALAWMVSRENSKELPPFWEQRSDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGKSLPIERIKKNQLKKECNVYDESMKLGGNNTSEKADGLIKGSRCS
GEPSISDDKGKNKYPKSEFSSSRPKRRKTAVQYTESSDSEESETNELPQKMKGKLKNTQS
ETKIREKAGSSKVKEDAEFACALTSSTPATKKKMLKKRASAVESSKKTDTEERPRTTLII
CPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRVRDPALLSKQDIVLTTYNILTHDYGTK
ADSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLS
FLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIRGKPVLELPER
KVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHL
LTNAVSSSSPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCK
PCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDTEKKPNMEWTSSSKINALMHA
LIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTE
AGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFI
VKDSVEENMLKIQNTKRELAAGAFGTKKADASEMKQAKINEIRTLIDL
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagagatcctgtttggaagtacttgcagactgtccagtacgga
gtccatggaaattttccacgcctctcatatccaactttctttcctcgttttgaattccaa
gatattattcctccagatgatttcctaacgagcgatgaagagctagattcagttttattt
ggaactttgagaggtcatgtagttggactacgctattacacaggagtagttaataataat
gaaatggttgcattacaacgagaacccgataacccttatgataagaatgcaattaaagtg
aacaatgtgaatggaaatcaggtcggccatataaagaaagatcttgcagctgccttggcc
tatatcatggacaacaaattggctcaagttgaaggggtagttccttttggtgcaaacaat
gcttttaccatgcctttgcatatgactttttggggaaaagaagaaaatagaaaagcagtt
ttagatcagttgaagaaacatggatttaaattgggtcctgcaccaaaaactttaggattc
agtttggaaagtggttggggctctggaagagcgggaccaagctatagtatgccagttcat
gctgcagtacagattacaactgaacagcttaagacagagttcgacaaattgtttgaagat
ttaaaggaagatgataaaactcaggaaatggaaccagctgaggctgttgaaacaccgttg
cttccacatcaaaaacaagctctagcttggatggtttcacgggaaaacagtaaagaactt
ccaccattctgggaacagcgaagtgacttatactataacacaataacaaatttttctgaa
aaggaccgaccagaaaatgttcatggaggaattttagctgatgatatgggtttgggcaaa
actctgacagccattgcagtgattcttaccaacttccatgatggcaaatctcttcctatt
gaaagaattaagaaaaatcagctgaagaaggaatgtaatgtttacgatgaatctatgaaa
cttggagggaacaataccagtgaaaaggcagatggactaatcaaaggatctagatgtagt
ggagaacccagtatttcagatgacaagggaaagaataaatatcccaagtcagaattctct
agctcccgccccaaaaggagaaaaactgcggtacagtacactgaaagcagcgattcagag
gaaagtgaaacaaatgaattgccacagaaaatgaaaggcaaactgaaaaatacacagtca
gagactaaaatcagagaaaaagcaggatcatctaaggttaaagaagatgcagagtttgca
tgtgcacttacttcatctacccctgcaaccaaaaagaaaatgttgaaaaagagagcatct
gcagtggagagttcaaagaaaactgatactgaagagagaccaagaacaacactgatcatc
tgtccactttctgtgttaagcaactggattgaccagtttggacaacatataaaatcagat
gtgcacttgaatttttatgtttattatggtcctgatcgtgttagagacccagccttgctt
tcgaaacaggatattgttttgactacatataatattttaactcatgactatggaactaaa
gctgatagtccactacatagcataaggtggctaagagtgatcctggatgaaggacatgcc
atacgaaatccaaatgctcagcagacaaaagctgtacttgatttagaagcagaaagaaga
tgggtattgacaggcactccaattcagaattctttaaaagacttgtggtctcttctttcc
ttcttaaaacttaaaccatttcttgatagagaatggtggcatagaacaatacagcgtcct
gtcacaatgggagatgaaggtggacttaggcgtttacagtccctaattaaaaatattaca
cttagaagaacaaagacaagcaaaattagaggaaaacctgttttggagttaccagaacgt
aaagtatttattcagcacattacactttcagatgaagagaggaagatttaccagtctgtg
aaaaatgaaggcagagctactattggaaggtattttaatgaagggactgtccttgcacac
tatgcagatgtcctgggtcttttgcttagattgcggcagatttgttgtcatactcacctt
cttacaaacgcagtgtcttccagtagtccctcaggaaatgatacacctgaagaactacga
aagaagttaataaggaagatgaagttaattctgagctcaggttctgatgaagaatgtgca
atttgcttggattctttaacggttcctgtcataacacattgtgcacacgtcttttgtaaa
ccctgcatttgccaggtcattcagaatgagcagccacatgctaaatgccctttatgcaga
aatgatatacatggagacaatttattagaatgtcctccagaagaattggcatgtgacact
gagaaaaagcctaatatggaatggacatccagttcgaagattaacgctctaatgcatgca
ttgattgacttaagaaagaagaaccccaacataaaaagtttagttgtttctcagtttaca
acatttctgtctttaatagaaacaccactcagagcctctggatttgtgtttactcgtttg
gatggttctatggcccaaaagaaaagagttgaatcaattcagtgttttcaaaacactgaa
gcaggatctccaactataatgcttctatccttaaaagcaggtggagttggtttgaatctt
tctgcagcttctcgagtatttttaatggatccggcctggaatccagctgctgaagatcag
tgctttgacagatgccatagacttggccagaagcaagaagtcattatcacgaagttcatt
gtgaaggattctgttgaagaaaatatgctgaaaatacaaaacacaaagagagaacttgca
gctggagcctttggaactaaaaaagcagatgctagtgaaatgaaacaagctaaaattaat
gaaatcagaactttaattgatttataa

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