Lagenorhynchus albirostris (white-beaked dolphin): 132521948
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Entry
132521948 CDS
T10760
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04136
Autophagy - other
lalb04140
Autophagy - animal
lalb04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
132521948 (ATG4B)
04140 Autophagy - animal
132521948 (ATG4B)
04136 Autophagy - other
132521948 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lalb01002
]
132521948 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lalb04131
]
132521948 (ATG4B)
03029 Mitochondrial biogenesis [BR:
lalb03029
]
132521948 (ATG4B)
Peptidases and inhibitors [BR:
lalb01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
132521948 (ATG4B)
Membrane trafficking [BR:
lalb04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
132521948 (ATG4B)
Mitochondrial biogenesis [BR:
lalb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132521948 (ATG4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
132521948
NCBI-ProteinID:
XP_060007571
LinkDB
All DBs
Position
6:complement(252908..273294)
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AA seq
447 aa
AA seq
DB search
MCSNLIATLTYDTLRFAEFEDFPETSEPLWILGRKYSIFTEKDEILADVASRLWFTYRKN
FPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTRRTRQPDSYFSVLHEFLD
RKDSCYSIHQIDGGAGRALNSLAWAMSPVLLPGAGRWGGDTLRRSLSLWEDASWCQSGAR
AQAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHVAMDNTVVMEDIRRLCGSS
LPCAGAAALPAGSEPRCNGLPAGPEVASRPSPWRPLVLLVPLRLGLTDINAAYTETLKHC
FMMPQSLGVIGGKPNSARYFIGYVGEELIYLDPHTTQPALQASEHCPIPDESFHCQHPPS
RMSIAELDPSIAVGFFCGTEDDFNDWCQQVKKLSLLGGALPMFELVERQPSHLACPDVLN
LSLDASDVERLERFFDSEDEDFEILSL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctaacttaatagctactctgacctacgacactctccgatttgctgagtttgaa
gatttccccgaaacctcggagcctctttggatcctgggtagaaagtacagcatcttcaca
gaaaaggacgagatcttggccgatgtggcgtcgagactttggtttacatacaggaagaac
ttcccggccattgggggcaccggccccacctcggacacgggctggggctgcatgctgcgg
tgtggacagatgatctttgcccaagccctggtgtgccggcacctgggccgagactggagg
tggacgcggcggacgaggcagccggacagctacttcagcgtcctgcacgagttcctggac
aggaaggacagctgctactccatccaccagatagacggaggtgcgggtagagccctgaac
tcgctcgcctgggccatgtccccagtcctgctgcccggtgcaggtcggtggggaggggac
accttgaggaggagtctgtccctttgggaggacgcgtcctggtgccagtcaggagctcgt
gcccaagcacaaatgggagtcggcgagggcaagtccatcggccagtggtacgggcccaac
accgtcgcccaggtcctcaagaagctcgccgtcttcgacacgtggagcgccctggccgtt
cacgtagcgatggacaacacggtggtgatggaggacatcagaaggttgtgcgggagcagc
ctgccttgtgccggggccgcagcgcttcctgcaggttccgagccgcgctgtaacgggctc
ccggccggccctgaggtcgccagcaggccgtcaccatggagaccgctggtgctgctggtc
ccgctgcgcctggggctcacggacatcaatgcggcctacacggagaccctgaagcactgc
ttcatgatgccccagtccctgggcgtgatcggagggaagcccaacagtgcccgctacttc
atcggctacgtgggtgaggaactcatctacctggaccctcacaccacgcagccagccctg
caggcctctgagcactgcccgatcccggacgagagcttccactgccagcacccgcccagc
aggatgagcatcgcagagctcgacccgtccatcgccgtgggctttttctgtgggaccgag
gacgactttaacgactggtgccagcaagtgaaaaagctgtccctccttggaggcgcgctg
ccaatgtttgagctggtggagcggcagccttcccacttggcctgtcctgacgtcctgaac
ttgtccttagatgcttctgacgtagagcggctggaaagattctttgactcagaagatgaa
gactttgaaatcttgtccctttga
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