Lagenorhynchus albirostris (white-beaked dolphin): 132522039
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Entry
132522039 CDS
T10760
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04151
PI3K-Akt signaling pathway
lalb04510
Focal adhesion
lalb04512
ECM-receptor interaction
lalb04820
Cytoskeleton in muscle cells
lalb04926
Relaxin signaling pathway
lalb04933
AGE-RAGE signaling pathway in diabetic complications
lalb04974
Protein digestion and absorption
lalb05146
Amoebiasis
lalb05165
Human papillomavirus infection
lalb05200
Pathways in cancer
lalb05222
Small cell lung cancer
Brite
Exosome [BR:
lalb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
132522039 (COL4A4)
Glycosaminoglycan binding proteins [BR:
lalb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132522039 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132522039
NCBI-ProteinID:
XP_060007939
LinkDB
All DBs
Position
6:11545588..11680198
Genome browser
AA seq
1686 aa
AA seq
DB search
MALVRRSFRWIKPLATDSWLLVLILFSVQHAYGGGKKFIGPCGGRDCSLCQCFPEKGSRG
QPGPPGPQGPIGPLGPPGPIGIPGEKGMRGDSGLPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGKSGIDGYNGSRGAPGFPGERGAPGPQGSPGLLGKKGEKGNSVFILGVIKGI
QGDRGDPGPPGLPGSRGVRGPAGPVGYPGEPGLAGPPGPPGSPGLKGNPGVGVKGQMGDP
GEVGQQGSPGPTLLVQPPDSGLYKGAKGIKGMPGIIGPPGPPGPKGEPGIGTKGEKGIPG
FPGPRGDPGFYGSPGFPGLKGEPGVFGDPGPFGFLGPKGDPGDRGHPGPPGVLATPALPL
KGPPGDPGHPGRYGEMGAVGPPGPPGPPGRPGEVCAGMMGPPGPRGFPGHPGFPGAAGIP
GRADSAPGKPGNQGPPGLPGVPGLPGPPGSDVVYCSAGPPGPQGIKGKVGPPGRRGSKGE
KGNTGLCACQPGPSGPPGPPGLPGRQGSKGDLGLPGRLGEKGYPGLPGARGSPGPPGRPG
TSGPPGSKGEKGDLVVSRVKGHKGERGPDGPPGFPGQQGQHGRDGYAGEKGDPGPLGDHE
DAAPGDKGPPGPPGPPGRAGPRGPPGLGFPGPPGERGQPGAPGCPGKRGPDGWKGQKGDT
VPCNVTYPGRPGPPGFDGPPGPKGFPGRRGAPGLRCLDGEKGQRGKPGISGIPGPPGFHG
DMGDPGFGGEKGSSPVGPPGSPGSPGVNGQKGPPGDSAIGYAGPPGKRGLLGVPGSKGLR
GDPGRPGAAGPAGMLGFLGLKGPKGREGSAGFPGIPGPPGHSCERGAPGRPGPPGLPGAP
GSPGAPGWKGQQGDMGPPGPAGMKGLPGVPGRPGADGPPGPPGVPGPSGDDALPGLPGPK
GPQGLPGFLGFPGERGKPGPDGHPGRKGEHGEQGWPGSLGDRGVKGDKGARGPPGYEGEM
DIILKKGETGEPGPPGDGGFPGEEGDKGHPGIQGKKGEPGSCGPPGFHRGEPGRKGQPGL
PGPPGPPGSPGLRGLIGFPGFPGDQGEPGSPGPPGLSGIDGTRGPKGYKGEPASQFGLPG
PKGEPGSPGYPGHLGAPGEQGLPGVQGPGGPPGRPGPPGSSGPAGCPGNPGLPGLQGHPG
EMGDPGPRGLVGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGASGSHKTGPPGPVGM
PGPKGETGDPGSPGISPPGLFGDKGPPGPPGRPGPPGPAGAPGRALKGDIPDPGLPGDQG
PPGPSGPRGIPGPPGPPGRVELLKGEPGDCGLPGPPGPPGPPGPPGRKGFPGCDGKDGQK
GPMGFPGLQGPPGTPGPPGEKGLPGPPGRQGPLGPPGKLLMPGPPADVDACPRIPGLPGV
PGPRGPEGTMGLPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPGHKGDMGEAGCPGVP
GPPGPVGDPGPEGFGPVYPSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQERAHN
QDLGLAGSCLPMFSTLPFAHCNIHQACQYARRNDRSYWLASAAPLPMTPLSEEEIRPYIS
RCAVCEAPAQAVAVHSQDQSVPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANEYSFWLTTVRPDLQFSSAPSPDTLKESQAQRQKVSRCQ
VCVKHS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcattggtaaggcgctctttcaggtggatcaagcccttggccacagattcctggttg
ctcgtacttattctcttttctgtacaacatgcgtacgggggtggaaagaagtttattggt
ccctgcgggggaagagattgctctctttgccagtgctttcctgaaaaggggtctcggggt
caaccaggaccaccggggccacagggtcctattggacccctggggccaccaggacccatt
ggaattccaggagagaaagggatgagaggtgacagtggccttcctggagcagcaggtgac
aagggtgataagggtccaaccggtgttcctggattcccaggtttggatgggatacctggg
cacccagggcctcctggatccagaggcaaatctggcatagacggttacaacggctcaaga
ggtgctccaggctttccaggagaaagaggagctcctggcccacaaggctccccaggcctt
cttgggaaaaaaggagaaaaaggaaattcagtgttcattttaggtgtcattaaaggtatt
cagggtgacagaggggacccaggacctcccggcttaccaggctcaaggggagtgagagga
ccagcaggcccagtgggatatccaggagagccggggttggcaggacctccaggccctcct
gggagtccaggtttgaagggtaatcctggcgtgggagtaaaggggcaaatgggagacccg
ggtgaggttggccagcagggttctccaggacccacccttctggtgcagccacctgattct
ggtctctataaaggagcaaagggtattaaaggaatgcctggaatcattggacctcctgga
ccaccaggacccaagggggagcccggtattgggacaaaaggagagaaaggtattcctggg
tttccaggacctcggggggaccctggcttctatggctctccaggttttccaggattaaag
ggggaaccaggagtgtttggagatcctgggccgtttggatttcttggtccaaagggagat
cctggagaccgcgggcacccaggaccaccaggggttttggcaactccagctcttccactc
aaagggcctccaggggatccagggcaccctggccgctatggagaaatgggggctgttgga
ccacctggtccccctggtccccctggtagaccaggcgaagtctgtgcaggcatgatggga
ccccctgggccacgagggtttcctggtcatccaggatttccaggggcagctggtattcct
gggagagctgattctgctccagggaaaccaggcaaccagggaccacctgggttgcctgga
gtgccagggttgccgggacctccaggatcagatgttgtatattgtagtgctgggcctcct
gggccacaaggaataaaaggcaaagtgggtccaccaggaagaagaggctcaaaaggagaa
aaaggcaacacagggctctgtgcctgccagcctggtccctcaggcccacccggccctcca
ggacttcctgggaggcaagggagtaaaggagacttgggactccctgggcgacttggagaa
aaaggttacccaggccttcctggtgccagaggatctccagggccaccaggaagacctggt
acctcaggaccacctggcagcaaaggagaaaaaggtgacctggttgtatcaagagtgaaa
gggcacaaaggagaaagaggtcctgatgggcccccaggatttccggggcagcagggacaa
cacggtcgagatggatatgctggagaaaaaggggacccaggaccgctgggagatcatgaa
gatgcagccccaggtgataaagggcctcctggaccaccaggccccccgggcagagcagga
cctagggggcctccgggactgggatttcctggtccaccaggagagagagggcaaccagga
gctccaggctgcccaggcaagaggggccctgatggctggaagggtcagaaaggtgataca
gttccttgtaacgtaacctaccctgggaggccaggcccaccaggttttgatggacctcca
ggtccaaagggatttccaggtcgtcggggagctcctgggttgaggtgtctggatggggaa
aagggtcaacgtggcaaaccaggaatctcaggaatacctggtccacctggttttcatggt
gatatgggagatccgggttttggaggtgaaaaggggtcctcccctgtcgggcccccaggc
tctccaggttcacctggagtgaatggtcagaaaggacctccgggagactctgctattggc
tacgcaggacccccaggaaagaggggtcttttaggagtaccagggtcaaaaggactcaga
ggtgatcctggacgaccgggggctgcagggccagctggcatgctcggattcctgggtctc
aaaggtcccaaagggagagaaggaagtgctgggtttccagggatcccaggtccacccggc
cattcctgtgaaagaggcgctccagggagaccagggccaccagggctccctggagctcca
ggaagtccaggtgccccaggttggaaaggacaacaaggggacatggggcctcctggaccc
gctggaatgaagggcctacccggagtcccaggacggccaggggcagatggacccccaggg
cccccgggagtcccaggccccagtggggatgatgcgcttcctggtcttccaggcccaaag
ggaccccaggggctacccggcttcctgggttttccgggagagagaggaaaacctggcccg
gacggacaccctggcagaaagggagaacacggagaacagggttggcccggctccctggga
gaccgaggagtgaaaggtgacaaaggagcaagaggacccccaggatatgaaggagaaatg
gatattattttgaaaaagggggaaaccggggaacctggacctcctggagatggtggattc
ccaggagaagaaggtgataaaggccatcctgggatacaagggaagaaaggagagccagga
agctgtggaccacctggatttcacagaggggagcccgggaggaaagggcagccaggcctt
cctggacccccaggccctccaggctcacctgggctgagagggctcattggctttccggga
tttccaggtgaccagggtgagccaggttctccagggccccctggactttcaggaatcgat
ggtacaagaggacctaaaggatacaaaggggaacctgcaagtcagtttggcctacctggt
ccaaagggtgagccaggtagccctggatatccaggacatttgggagcacctggagagcag
ggcttgcccggtgttcaaggacctggaggaccacccggaaggccaggaccgcctggctcc
tctggaccagcggggtgtccaggtaatccaggactgcctgggctgcagggacatccagga
gaaatgggagatcctgggccaagaggcctcgtgggggatccaggggcaccaggtcttccg
ggaataaaaggtccctccgggtcgcccggcctgaacggcttgcacggtttaaagggtcag
aagggcagcaaaggcgcttcaggttcccataaaacgggcccacctggtccagtgggaatg
cctgggccaaaaggcgagacaggagaccccgggagcccaggaatttctcctccaggactt
ttcggagacaaaggtcccccaggtcccccagggagacctggaccgcctggtcctgcaggt
gccccaggaagagctcttaagggtgacattccggacccgggtctgcctggagatcaggga
cctcctggccccagtggtccaagaggaatacccgggcctccagggccccctgggagggtt
gaacttctgaaaggtgaaccaggtgactgtggtctgccggggcctccaggtcccccaggc
ccaccaggccctccaggacgcaaaggcttcccaggatgtgatggaaaagatggccagaaa
ggaccaatgggattcccggggttgcaggggccacctggaactcctgggccacctggagag
aagggtttacctggacctccaggcagacaggggcccttgggtcctccaggtaagcttcta
atgcctgggccccctgcagacgtggatgcttgcccccgaatcccagggcttcctggggta
ccaggcccaagaggaccagaaggaaccatggggctccccggaatgagaggccccccagga
ccagggtgcaaaggagagcccgggctggatggcaggagaggcgaggatggccttccaggg
tcccctgggcctccgggacacaaaggtgacatgggagaagcgggctgcccaggagtacca
ggccctcctgggcccgtgggggatcctgggcccgaagggttcggccctgtataccccagt
ggcttcctcctggttctccacagtcagacagatggagaacccacctgccccgcgggcatg
cccaggctctggaccgggtatagtctgttatacctggaaggacaggagagagctcacaat
caagaccttggcctggcgggctcctgcctccccatgttcagcacgctgcccttcgcccac
tgcaacatccaccaagcgtgccagtacgcccggaggaacgacaggtcctattggctggcg
agcgccgcgccgttgcctatgacgccgctctcggaggaggagatccgcccgtacatcagc
cgctgcgccgtgtgcgaggcccccgcgcaagccgtggccgtgcacagccaggaccagtct
gtcccgccgtgtccgcgggcctggaggagcctctggattgggtactctttcctgatgcac
acaggtgctggggaccaaggaggcggccaggccctcatgtcacccggcagctgcctggag
gatttcagagctgcaccgttccttgaatgccaaggacgtcagggaacttgccactttttt
gcaaatgagtatagcttctggctgacaactgtgagacctgacttgcagttttcctcagca
ccctcaccggacaccttgaaagaaagccaagcccagcgccagaaagttagcaggtgccag
gtctgtgtgaagcacagctag
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