Lagenorhynchus albirostris (white-beaked dolphin): 132523296
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Entry
132523296 CDS
T10760
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03013
Nucleocytoplasmic transport
lalb05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132523296 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132523296 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalb03019
]
132523296 (NUP188)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132523296 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
Nup188_SH3-like
HEAT_SCC3-SA
DUF4912
Motif
Other DBs
NCBI-GeneID:
132523296
NCBI-ProteinID:
XP_060010110
LinkDB
All DBs
Position
7:complement(7274836..7318482)
Genome browser
AA seq
1748 aa
AA seq
DB search
MAAAAGDPCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAEK
VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA
LILKIADYYYEERTYILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYHAYFEMAPTDLLVLTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
LICQDMDRLMLTFGDIPHHTPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLQALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVRPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISRPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHQVSNMSQMISAEGMNA
GGYGNLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQSLCICSLAYTEAGQTVINI
MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH
VVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLEKFSSEKRFAYWSGYVK
SLAGHTADTEGSSCTSLVEYQMLVSAWRMFLIIATSHAEIMHLTDSAVRRQLFLDVLDGT
KALLLVPASVNCLRLGSMMCTLLLILLRQWKSELGSVDEILRPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSATE
DKDSMETDDCSRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPLLPTLFTTL
EVSLRMKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTVQT
PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERALQCLNAVRTV
QSLACLEEADHTVGFLLQLSSFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQH
YLQNKNGEGIPSAVAPRAQRPPTAAPSCSSSKQPTPDTQASEQRALHTVQYGLLKILSRT
LAALRHFTPDVCQILLDQSLDLAEYDFLFALSFTTPTFDSEVAPSFGTLLATVNVALNML
GELDKKKEPFTQAVGLSTQAEGSRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDKQ
RMKQELSSELSTLLSSLSRYFRRGAPSSPAAGILPSPQGKSTSLSKVSPESQEPLIQLVQ
AFVRHVQR
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgccggcgatccgtgtgtgaggagtagtagagaactgtggacaattttg
cttggaaggtcagctctgagagaactgaatcagattgaggcagagctgaataaacattgg
cagcggctgttagaagggctttcttactataaacctcccagtccaaattcagctgaaaaa
gtgaaagctaataaagatgtagcttcaccactgaaggaactgggtttaagaatcagcaag
tttttgggtcttgatgaagaacagagtgtgcagttactccagtgctaccttcaagaggat
tacagaggtactcgggactcactaaagacggtactgcaagatgagaggcagagccaggcc
ttaatcctgaagattgcagattattactatgaagaaagaacgtatattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacacccctatagggttgaatatgcagac
tgtgttgataaattggaaaaggaactagttacaaaatatagacagcaatttgaagagctt
tataaaactgaagcaccaacatgggagacacatggaaacctcatgactgagcgccaggtg
tctcgctggtttgttcagtgccttcgggagcaatccatgctgctagaaattattttcctt
tatcatgcatactttgagatggcacctactgacctattggtattaaccaagatgtttaaa
gagcaaggatttggtagtaggcagactaacaggcacctggtagatgagaccatggatcct
tttgtggatcggattggctacttcagtgcccttatcctggtggaaggcatggatattgaa
tccttgcataagtgtgctttggatgacagaagagaactgcaccagtttgcccaggacggg
cttatttgtcaggatatggaccgtttgatgttgaccttcggggacattccacatcacacc
ccagtgcttttggcttgggctctcctccgtcacaccctgaatccagaagagacaagcagt
gttgtccggaagataggtggcacagccatccagctgaacgtatttcagtatttgacccga
ctactccgctcactggccagtgggggaaatgattgtaccactagcaccgcgtgcatgtgt
gtctatggactcctttcttttgttctgacctcgctggagctgcacacactgggcaatcag
caggatgtaatcgacacagcatgtgaagtcctggcagacccttctcttccagaactgttc
tggggaacagagccaacctctggtcttgggatcattctggacagtgtatgtggaatgttt
ccccatctcctctccccactcctgcaattgctacaagccctcgtatcagggaagtctact
gccaagaaggtgtatagtttcttggataagatgtctttctacaatgaactttataagcac
aagccccatgatgtgatctcccatgaagacggaactctctggcggaggcaaacacccaaa
ctcctttaccctcttgggggtcagaccaaccttcgcatacctcaaggcactgtgggccaa
gtaatgttggacgatagggcctacctggtacgctgggaatactcttatagcagctggacc
ctcttcacctgtgagattgaaatgctgcttcatgttgtttccactgcagatgtgattcag
cactgccagcgggtcagacccatcattgatctggtccataaggtcatcagtacagacctg
tcgatagcagactgtctcctgcccatcacgtcccgcatctacatgctgctgcagcggtta
acaaccgtgatctcccggcctgtggatgtcattgcttcttgtgtcaattgcttgaccgtt
ctggctgcccggaacccagcaaaggtctggactgatcttcgtcacacaggctttttacct
ttcgtggcccaccaggtctccaacatgagtcagatgattagtgctgaggggatgaatgct
ggagggtatggaaacctcttgatgaatagtgaacagccccagggcgagtatggagtcact
gttgcctttctgcgcttgatcaccactcttgtcaaggggcagcttggtagtacccagagc
caagggctggtgccctgtgtcatgtttgtgctgaaggagatgctgccgagttaccacaag
tggcggtacaactcccacggagtgagagaacagattggttgcctgatcctggagctgatt
catgcaatactgaacctgtgtcatgagacagaccttcacagcagtcatacccccagtctg
cagtctctctgcatctgcagcctggcctatacggaagcaggacagactgtgatcaatatc
atgggcattggcgtggacactatcgacatggtgatggctgctcagccccgcagtgatggg
gcagagggccaggggcagggccagctgctgatcaagacggtgaaactggcattctccgtc
accaacaatgttattcggctgaaacctccttctaatgtggtgtcccccctggaacaggct
ctcacacaacatggtgcccatgggaacaaccttattgctgttcttgccaaatacatctac
cacaaacatgaccctgctttgccacgtcttgccatccagctactgaaacgtctggccacg
gtggccccaatgtcagtatatgcctgcctgggcaatgatgcggctgccatccgcgatgcc
ttcctgacccgactgcagagcaagattgaggacatgcgcatcaaagtcatgattctggaa
ttcctcacagttgccgtagagacgcagccaggcctcattgaactgtttctgaatctggag
gtgaaggatggcagtgatggctccaaggaattcagccttggggtgtggagctgtctccat
gtggtgctggagctgattgattcccagcagcaggatcgctactggtgcccaccactgctg
caccgtgcagccattgcctttctgcatgccctgtggcaggaccgtcgggacagtgccatg
ctggtcctcagaaccaaacccaagttctgggagaatttaaccagtccactatttggaacc
ctttctcctccctcagaaacatccgagcccagcatcctggaaacctgtgccctaatcatg
aagataatttgcttggagatatactacgtagttaagggctcattagaccagtctttaaaa
gatacactcgagaaattttccagcgagaaacgctttgcctactggtcagggtatgtcaag
tccttggcaggtcacacggctgacacagagggcagcagctgcacctccctggtagagtat
cagatgctggtctccgcctggaggatgtttctcatcatcgccaccagtcacgcggagata
atgcacctgaccgactctgcagtgcgtcgccagctctttcttgacgtgctcgatgggacc
aaggcgttactcctagtccccgcctccgtgaactgcctccgcctgggctccatgatgtgc
actctgctgcttattcttctccggcagtggaagagtgagttaggttctgtggatgaaatc
ctcagacccttgacggagatcctggagggagtgctgcaggcagaccagcaactcatggag
aagactaaggccaaggtgttctcagcattcatcacggtgctgcagatgaaggagatgaga
gtgagcgacatcccccagtactcccagctggtgctgaacgtctgtgagaccctccaagaa
gaggtgattgcactcttcgaccagacccgccacagtctggcatcaggcagtgccacagag
gacaaggacagcatggaaactgatgactgctcccggccccggcacaaggaccagcgggat
ggggtgtgtgtcctgggcctgcatctggccaaggagctgtgtgaggtggacgaggatggc
gactcgtggctgcaggtgacccgcaggctccccctcctgccgaccctcttcaccaccttg
gaggtgagccttcgcatgaagcagaacctgcatttcactgaggccgcgctgcacctgctc
cttaccctggctcgcacccagcagggggccacagcagtggctggagccggcatcacccag
agcatttgtttgcccctcctgagtgtgtaccagctcagcaccaatgggacagtgcagacg
cccagcacctctcggaagtcgctggacgccccctcttggccgggtgtctaccgcctgtcc
atgtccctgatggagcggctcctcaaaaccctgcgctacaacttcctgaccgaggccctg
gacttcgtgggggttcaccaggagcgggccttacagtgcctcaatgcggtgaggacggtg
cagagtctggcatgcctggaggaggcggaccacaccgtgggcttcctcttgcagctctcc
agcttcaggaaggagtggcacttccacctgcctcagcttatgcgggacgtccaggtaaac
ctgggctacctgtgccaggcctgtacctccctcctgcacagccgcaagatgctgcagcac
tacctgcagaacaaaaacggggagggcatcccctcggctgtcgccccccgagctcagcgg
ccacccacagctgccccctcctgctcctcctccaagcagcccactcctgacacacaggcc
tcggagcagcgggccttgcacaccgtccagtacgggctcctcaagatcctcagcaggacc
ctggcggccctgcgccacttcacccccgacgtgtgccagatcctgctggatcagtccctg
gaccttgctgaatacgacttcctgtttgccctgagcttcaccactcccacctttgactcc
gaagtggccccctcttttgggacccttctggccacagtgaatgtggccctaaacatgctt
ggtgagctggacaagaaaaaggagcctttcacccaggcagtggggctcagcacacaagcg
gaagggagcagaacactgaagtccctcctgatgtttaccatggagaactgcttctacctg
ctcatctcccaggcaatgcgttaccttagggacccggctgtgcacccccgggacaagcag
cggatgaagcaggagctcagctcagagttgagcactctgctctccagcctctcacgctac
ttccgccggggagcccccagctcccctgctgctggcatccttccctcgcctcagggcaag
tccacctctctctccaaggtcagccctgagagtcaggagcctctgatccagctagtgcag
gcctttgtccggcacgtgcaaagatag
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integrated database retrieval system
