Lagenorhynchus albirostris (white-beaked dolphin): 132523471
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Entry
132523471 CDS
T10760
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb02010
ABC transporters
lalb04148
Efferocytosis
lalb04975
Fat digestion and absorption
lalb04979
Cholesterol metabolism
lalb05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132523471 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132523471 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
132523471 (ABCA1)
04979 Cholesterol metabolism
132523471 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
132523471 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lalb02000
]
132523471 (ABCA1)
Transporters [BR:
lalb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132523471 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
132523471
NCBI-ProteinID:
XP_060010693
LinkDB
All DBs
Position
7:28145960..28284329
Genome browser
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSHRDT
SMKNIRQVLRTLYQIERSSSGLKFQDFLVDNETFSGFLHHNLSLPRPTVDKILGADVSLR
KVFLQGYQLHLTNLCNGSKLGELIQLGDQEVSMLCSLPKEKLDAAEQILHSNLDILKPIL
TELNSTSPFPSKELAEATKALLDSLGIVAQELFSMRSWTDMRQEVMFLTNANSSSSPTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDAGPFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPVTKQVMAEVNKTFQELAVFHDLEGMWQELS
PKIWTFMESSPEMDLVRTLLDSRGNDHFWEQRLEGLDWTAKDIVAFLAKHPEEVQSTNGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPVATEVLLINKSMELLDERKFWAGIVFTG
IAPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGIYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDAFLYGVMTW
YTEAVFPGQYGIPRPWYFPCTKSYWFGEEGNEKSQPGFSQKGTSEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRH
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRVFGDKQSCLRPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFGALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDVSTQELLSALTGKPGFGTRCMEGNPIPDMPCSVGEEEWSTTP
VPQTITELFRNGNWTMENPSPACQCSSDRIKKMLPVCPLGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQTLPPSEAVNDAIKQMKK
HLKVAKDSSADRFLSSLGRFMTGLDTKNTVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSEYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVKAKLLPLNDEDEDVRRERQRILDGGGQNDILEVKELTKV
YRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSSTFKMLTGDTSVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEREVGKVGEWAIRKLGLVKYGEK
YAGDYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFE
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVALLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagctgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcctctgtttatcttcctgatcctgatc
tccgtgcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacacttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccgactcctggtgaggctcccggggttgttggaaactttaacaagtcc
attgtgtctcgcctgttctcagatgctcggcgacttcttttgtacagccacagagacacc
agcatgaagaacatacgccaagttctaaggacattataccagatcgagcgttccagctca
ggcttgaagtttcaggacttcctggtagacaatgaaaccttctctggattcctgcatcac
aacctctctctgccaaggccaactgtggacaagatactgggggctgatgtcagtctccgc
aaggtatttttgcaaggctaccagttacatttgaccaatctgtgcaacggatcaaaatta
ggagagctgattcaacttggtgaccaagaagtctccatgctttgcagcctgccaaaggag
aaactggatgcagcagagcaaatacttcattccaacctggacattctgaagccgatcttg
acagaactaaactccacgtctcccttccccagcaaggagctggctgaagccacaaaagct
ttgctggatagtcttgggattgtggctcaagagctcttcagcatgaggagctggactgac
atgcggcaggaggtgatgtttctgaccaacgcgaacagctccagctcccccacccagatc
taccaggccgtgtcccgcatcgtctgcggccatcccgagggtgggggcctgaagataaag
tcccttaactggtatgaggacaacaactacaaagccctctttggaggcaacggcactgag
gacgacgctggccccttctatgacaattctaccactccttattgcaatgatttgatgaag
aatctggagtccagtcctctttcccgcatcatatggaaagctctcaagcccctgcttgtt
gggaagatcctgtatacacctgacactccagtcacaaagcaggttatggctgaggtgaat
aagaccttccaggaactggctgtgtttcatgatctggaaggcatgtggcaagagctcagc
cccaagatctggaccttcatggagagcagcccagaaatggaccttgtccggacgcttttg
gacagcagaggcaatgaccacttttgggaacagcgattggaaggcttagattggacagcc
aaagatatcgtggcatttctggccaagcacccagaggaagtgcagtccactaatggctct
gtgtacacctggagagaagccttcaatgagaccaaccaggcaatccagaccatctctcgc
ttcatggagtgtgtgaacctgaacaagctggaaccagtggcaacagaggttctgctcatc
aacaagtccatggagctactggatgagcggaagttctgggctgggatcgtgttcactgga
atagctcctggcagtgttgagctgccccatcacgtcaagtacaagatccggatggatatt
gacaatgtggagaggacgaataagatcaaggatgggtactgggaccccggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggcttcgcgtacttgcaggatgtggtg
gagcaggcaatcatccgggtgctgacgggcacagagaagaaaactggcatctacatgcag
cagatgccttacccctgttacgttgatgacatcttcctgcgggtcatgagccggtcaatg
cccctcttcatgacgttggcctggatttactctgtggctgtgatcatcaagggcatcgtg
tacgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacagcatc
ctgtggttcagctggttcatcagcagcctcatccccctgctcgtgagcgccggcctgctg
gtggtcatcctgaaattaggaaacctgctgccctacagcgaccccagtgtggtgtttgtc
tttctgtccgtgttcgccgtggtgaccatcctgcagtgctttctgatcagcacgctcttc
tccagagccaacctggcggcagcctgtggaggcatcatttacttcatgctgtacctgccc
tacgtcctgtgcgtggcgtggcaagactacgtgggcttcacactcaagatctttgcgagc
ctgctgtctcctgtggcttttggctttggctgtgagtactttgccctttttgaggagcag
ggcattggggtgcaatgggacaacctttttgagagccccatggaggaagatggcttcaac
ctcaccacctcggtctccatgatgctgtttgacgccttcctctacggggtgatgacgtgg
tacaccgaggctgtgtttccaggccaatatggaatccccaggccctggtatttcccttgt
actaagtcctactggtttggcgaggaaggcaatgagaagagccagcctggtttcagccag
aagggaacatcagaaatctgcatggaggaggaacccacccacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgagatggcatgaaggtggcagttgacggcctggcc
ttgaatttctatgagggccagatcacctccttcctgggccacaatggagctgggaagacc
accaccatgtcaatcctgaccgggttgttcccccccacctcgggcactgcctacatcctg
gggaaagacattcgctccgagatgagcaccatccggcagaacctgggggtctgtccccag
cataacgtgctgtttgacatgctgactgttgaagagcacatctggttttacgcccgcctg
aaagggctctcggagaagcacgtgaaagcagagatggagcagatggccctggatgttggt
ttgccgccaagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctgtctgtggccttggcctttgttggaggatccaaggttgtcattctggatgagcccaca
gccggcgtggacccttactcccgcaggggaatatgggagctgctgctgaaatatcgacat
ggccgcaccattatcctctccacacaccacatggatgaagcggacatcctgggggacagg
attgctatcatttcccatgggaagctgtgctgcgtgggctcctccctgttcctgaagaac
cagctggggacaggttactacctgaccctggtcaagaaggatgtggagtcctccctcagc
tcgtgcagaaatagcagtagcactgtgtcgtacctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagtgaccatgaaagtgacacgctgaccatcgatgtc
tccgcgatctccaacctcatcaggaagcacgtggccgaggcccggctggtggaagacatt
gggcatgagctgacctacgtgctgccctatgaagccgccaaagagggagcctttgtggaa
ctcttccatgagattgatgaccggctctcagacctgggcatctccagttacggaatctca
gagactaccctggaagaaatatttctcaaagtggctgaagagagtggggtggatgctgag
acctcagatggcaccctaccggcaagacgaaacagacgggtcttcggggacaagcagagc
tgtcttcgcccatttactgaagatgatgctgttgatccaaatgattccgacatagatcca
gaatccagagaaacagacctgctcagcgggatggacggcaaaggctcctaccaggtgaag
ggctggaaactcacacagcagcagtttggggcccttttgtggaagaggctgctgattgcc
aaacggagtcggaagggattctttgctcagattgtcctgccggctgtgtttgtctgcatc
gccctggtgttcagcttgatcgtgccaccctttggcaagtaccccagcctggaacttcag
ccctggatgtacaacgaacagtacacatttgtcagtaatgatgctcctgaggacgtgagc
acgcaggaactcttgagcgctctcaccggaaagcctggcttcgggacccgatgtatggaa
ggaaacccaatcccagacatgccctgctcggtgggggaggaggagtggagcaccaccccc
gtgccccagaccatcacggagctcttccgaaacgggaactggacgatggagaacccctcc
cccgcctgccagtgtagcagcgacagaatcaagaagatgctgcccgtgtgtcccctgggg
gctggggggctgcctcctccacagagaaaacagaacactgcggacatccttcagaacctg
acgggaagaaacatttcggattatctggtgaagacatatgtgcagatcatagccaaaagc
ttaaagaacaagatttgggtgaatgagtttaggtacggtggattttccctgggtgccagt
aattctcaaacacttcctccgagtgaagcagttaatgatgccatcaagcaaatgaagaaa
cacttgaaggtggccaaggacagttctgcagatcgatttctcagcagcttgggaaggttc
atgacaggactggacacgaaaaataccgtcaaggtgtggttcaacaacaagggctggcac
gccatcagctctttcttgaatgtcatcaacaatgctattctccgggccaacctgcagaag
ggagagaaccctagcgagtatgggattactgccttcaatcaccccctgaacctcaccaag
cagcaactctcggaagtggctctgatgaccacatcagtggacgtccttgtgtccatctgt
gtcatctttgcgatgtccttcgtcccggccagctttgtcgtgttcctgatccaggagcgg
gtcagcaaagcgaagcacctgcagttcatcagtggagtgaagcctgtcatctactggctt
tccaattttgtctgggacatgtgcaactatgtggtccctgccacgctggtcatcatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgctcgccctt
ctactgttgctgtatgggtggtccatcacacctctcatgtacccagcctccttcgtgttc
aagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcatcggcatcaat
ggcagcgtggccacttttgtgctggagctcttcaccaacaataagctgaataacatcaat
gatatcctgaagtcggtgttcttgatcttcccacatttttgcctgggacgggggctcatt
gacatggtgaaaaaccaggcaatggcggatgccttggaaaggtttggggagaatcgcttt
gtctcgccgctgtcttgggacttggtgggacgaaacctcttcgccatggccgtggaaggg
gtggtgttcttcctcatcactgtgttgatccagtaccgattcttcatcaggcccagacct
gtaaaggcaaagcttcttcctctgaatgatgaggatgaagatgtgaggagggagagacag
agaattcttgatggtggaggacagaatgacatcttggaagtcaaggagctgactaaggta
tatagaaggaagaggaaacctgctgtcgacaggatttgcattggcattcctcctggtgag
tgctttggacttctaggtgtcaatggggctgggaaatcatcaactttcaagatgttaaca
ggagataccagtgttaccagaggagatgcttttcttaacaaaaacagtatcttatcgaac
atccacgaagtacatcagaacatgggctattgccctcagttcgatgccatcacagagctg
ctgactggaagagagcacgtggagttctttgcgctcttgagaggcgtcccggagagagaa
gtcggcaaggttggtgagtgggcaattcggaaactgggcctcgtgaagtatggagaaaaa
tatgctggggactatagcggaggcaacaagcgcaagctctcgacggccatggctttgatt
ggcgggcctcctgtggtgtttctggatgaaccgaccacaggcatggaccccaaagcccgg
cgattcttgtggaattgtgccttaagtatcatcaaagaagggagatcagtagtgcttaca
tctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatggg
cggttcaggtgtcttggcagtgtccaacatctgaaaaataggtttggagatggttataca
atagtcgtacgaatagcagggtccaaccctgacctgaagcctgtccaggagttctttgaa
ctcgccttcccgggaagcgtgctgaaggagaagcaccggaacatgctgcagtaccagctt
ccctcttcactgtcttccctggccaggattttcagcatcctttcccagagcaaaaagcga
ctccacatagaagactactctgtctctcagacaacacttgaccaagtatttgtaaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagaca
gtagtggatgttgcacttctcacatcttttctgcaggacgagaaagtgaaagaaagttat
gtatga
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integrated database retrieval system
