Lagenorhynchus albirostris (white-beaked dolphin): 132523614
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Entry
132523614 CDS
T10760
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03082
ATP-dependent chromatin remodeling
lalb04714
Thermogenesis
lalb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132523614 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
132523614 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
132523614 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalb03021
]
132523614 (SMARCA2)
03036 Chromosome and associated proteins [BR:
lalb03036
]
132523614 (SMARCA2)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132523614 (SMARCA2)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
132523614 (SMARCA2)
Chromatin remodeling factors
BAF complex
132523614 (SMARCA2)
PBAF complex
132523614 (SMARCA2)
GBAF(ncBAF) complex
132523614 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
132523614
NCBI-ProteinID:
XP_060011000
LinkDB
All DBs
Position
7:52763659..52936594
Genome browser
AA seq
1576 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPSM
GSADFPQEGMHQMHKPIDGMHDKGVVEDIHCGSMKGTTMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPILGSGPTAPQMPPSQPGTLIPGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQAAPQPQPQPQPPPPPPQQQQ
ALVNYSRPSGPGPELSGPSPPQKLPVPAPSGRPSPAPPAAAPPPAAAVPGPSVPQPTPGQ
PSPILQLQQKQSRISPVQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRT
KATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEK
QQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKE
TERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAK
EKKKRRKKRKKAEENAEGEESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKA
SQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDA
KQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEW
MVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDK
WAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGH
RMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFN
APFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQ
KILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLG
YSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYL
RLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDL
QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERR
AFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRL
MEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNL
EEMEEEVRLKKRKRRRNVDKDPAKEDMEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTV
INYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE
RIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED
ESNEEEDEEEEDESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDE
EPDGNEQSEASGTDDE
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggtgcgatgccccacccagggccttcgccagggccggga
ccctctcctggaccaattcttgggcccagtccaggacctggaccatccccaggttccgtc
cacagtatgatggggccaagtcctgggcctccaagtgtctcacaccctatgccgtcgatg
gggtctgctgacttcccgcaggaaggcatgcatcaaatgcataagcccattgatggtatg
cacgacaagggggttgtggaagatatccactgtggatccatgaagggcaccactatgcga
cctcctcacccaggaatgggccctccccagagtccgatggaccaacacagccaaggctac
atgtcgccgcacccgtctccgctgggagcccccgagcacgtctccagccctatattggga
agtggcccaaccgcaccgcagatgccgccaagccagccagggaccctcatcccaggcgac
ccgcaggcgatgagccagcccaacagggggccctcgcctttcagtcccgtccagctgcat
cagctgcgagctcagattttagcttacaaaatgctggcccggggccagcccctcccggaa
acgctgcagctcgcggtccaggggaaaaggacgttgccgggcatgcaacagcagcagcag
gcggcgcctcagccgcagccgcagccgcagccgccgccgccgccgccgcagcagcagcag
gcccttgtcaactacagcaggccatctggcccggggccggagctgagcggcccgagcccc
ccacagaagctgccggtgcccgcgcccagcggccggccctcgcctgcgccccctgcagca
gcgccgccgcccgcggccgccgtgcccgggccctcggtgccacagccgaccccggggcag
ccctcgcccatcctgcagctgcagcagaagcagagccggatcagccccgtccagaaaccg
cagggcctggaccccgtggagattctgcaggagcgggagtacagacttcaggctcgcata
gcccataggatacaggaactggaaaatctccctggctctttgccaccagatttacgaacc
aaagcaaccgtggaactgaaagcacttcggttactcaatttccagcgtcagctgagacag
gaggtagtggcctgcatgcgacgggacacgaccctggagacggccctcaactccaaagca
tacaaacggagcaagcgccagaccctgagggaagcccgcatgacagagaagctggagaag
cagcagaagatcgagcaggagaggaagcgtcggcagaagcaccaggaatacctgaacagt
attttgcagcatgcaaaagattttaaggagtaccatcggtctgtggctgggaagatccag
aagctttccaaagcagtggccacttggcacgccaacactgaaagggagcagaagaaggag
accgagcggatcgaaaaggagagaatgcggaggttgatggctgaagatgaagagggctat
agaaaactgatcgatcaaaagaaagataggcgtttagcgtatcttttgcagcagacggat
gagtatgtggccaacctgactaatctggtttgggagcacaagcaagcccaggcggccaaa
gagaagaagaagaggaggaagaagaggaagaaggctgaagagaatgcagagggggaggag
tctgccctgggaccagatggagagcccatagatgagagcagccagatgagtgacctccct
gtcaaagtgactcacacagaaaccggcaaggtcctgtttggcccagaagcacccaaagca
agtcagctggatgcctggttggaaatgaatcctggttacgaagttgcccctagatcggac
agcgaagagagcgattctgattatgaggaggaggatgaagaggaagagtccagtaggcag
gaaactgaagagaaaatacttctggatccaaacagcgaagaggtttccgagaaggacgct
aagcagatcatcgagacagctaagcaagacgtggacgatgagtacagcatgcagtacagc
gccaggggttcccagtcctactacacggtggcccacgccatctcggagagggtggagaag
cagtcggccctcctcatcaatgggaccctgaagcattatcagctccagggcctggaatgg
atggtttctctgtataataacaatttgaacggaatcttagctgatgaaatggggctggga
aagaccatacagaccattgcactcatcacttatctgatggagcacaaaagactcaatggc
ccctatctcatcattgttcccctttcgactctatctaactggacatatgaatttgacaaa
tgggctccttccgtggtgaaaatttcttacaagggcacccctgccatgcgtcgctccctc
gtcccccagttacggagtggcaaattcaatgtcctcctgactacttatgagtacattata
aaagacaagcacattcttgcaaagattcggtggaaatacatgatagtggacgaaggccac
cgaatgaagaatcaccactgcaagctgactcaggtcctgaacactcactacgtggccccc
agaaggatcctcttgaccgggacccccctgcagaataagctcccggagctctgggccctc
ctcaacttcctccttcccacgatttttaagagctgcagcacatttgagcagtggtttaat
gctccatttgccatgactggagagagggtggacttaaatgaagaagaaactatattgatc
atcaggcgtctgcataaggtgttgagaccatttttactgaggagactgaagaaagaagtt
gaatcccagcttccagaaaaagttgaatatgtgatcaagtgtgacatgtcagctctgcag
aagattctgtatcgccatatgcaagccaaagggatcctcctcacagacggttcggagaaa
gataagaaggggaaaggaggcgctaagacacttatgaacactatcatgcagttgagaaaa
atctgcaatcacccatatatgtttcagcacattgaggaatcctttgctgaacacctgggc
tattcaaatggggtcatcaatggggctgagctgtatcgggcctcaggaaagtttgagcta
cttgatcgtattctgccaaaattgagagcgactaatcaccgcgtgctgcttttctgccag
atgacgtctctcatgaccatcatggaggattactttgcttttcggaacttcctttacctg
cgccttgatggcaccaccaagtctgaagatcgtgctgctttgctgaagaaattcaatgaa
cctgggtcccagtatttcattttcttgctgagcacgagagctggaggcctgggcttaaat
ctccaggcagctgataccgtggtcatctttgacagcgactggaatcctcatcaggacctg
caagcacaagaccgcgctcaccgcatcggccagcagaacgaggtccgcgtgctgagactc
tgcaccgtgaacagtgtggaggaaaagatcctcgcagccgccaagtacaagctgaatgtg
gatcagaaagtgatccaggcaggcatgtttgatcagaagtcttcaagccacgagcggagg
gcattcctgcaagccatactggagcacgaagaggaaaatgaggaagaagatgaagtaccc
gacgatgagactctgaaccaaatgatcgctcgacgagaggaggaatttgatctttttatg
cgcatggacatggaccggcggagggaggatgcccggaacccaaaacgcaagccccgcctg
atggaggaagatgagctgccctcctggattattaaagatgacgccgaggtggaacggctg
acgtgtgaagaagaggaggagaagatcttcgggagggggtctcgccagcgccgggacgtg
gactacagcgacgccctcacagagaagcagtggctgagggccattgaagacggcaatttg
gaagaaatggaagaggaagtacggcttaagaagcgaaaaagacgaagaaatgtggataaa
gatcctgcaaaagaagatatggaaaaggccaagaagaggagaggtcgccctccggctgag
aaactgtcaccaaatccccctaaactgacaaagcagatgaatgctatcatcgatactgtg
ataaactacaaagacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaata
gaaggaaacagttcagggcgacagctcagtgaagtcttcattcagttaccttcaagaaaa
gaattaccagaatactatgaattaattaggaaaccggtggatttcaaaaaaataaaggaa
agaatccgtaatcataagtaccgaagcctgggtgacctggagaaagacgtcatgctgctc
tgtcacaatgctcagacgttcaacttggagggatcccagatctacgaagactccatcgtc
ttacagtcggtgttcaagagtgctcggcagaaaattgccaaagaagaagagagtgaggac
gagagcaacgaagaggaggacgaggaagaggaagacgagtcagagtcagaggcaaaatct
gttaaggtgaaaatcaagctcaataaaaaagatgacaaaggccgggacaaaggaaaaggc
aagaaaaggccaaatcgaggaaaagccaaacctgtggtgagcgattttgacagcgatgaa
gagccggatggaaatgaacagtcagaagctagtgggactgatgatgagtga
DBGET
integrated database retrieval system
