Lagenorhynchus albirostris (white-beaked dolphin): 132523914
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Entry
132523914 CDS
T10760
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb00100
Steroid biosynthesis
lalb01100
Metabolic pathways
Module
lalb_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
132523914 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lalb01006
]
132523914 (FDFT1)
Enzymes [BR:
lalb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
132523914 (FDFT1)
Prenyltransferases [BR:
lalb01006
]
Terpene biosynthesis
Squalene/phytoene synthase
132523914 (FDFT1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
132523914
NCBI-ProteinID:
XP_060011773
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All DBs
Position
7:107482586..107520638
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AA seq
471 aa
AA seq
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MAAVACGTKAMSLFKRTLVLSPGAAPRGAGTPPRGCPLPPAAWPSKDRPRGEGVCGRLRS
PAVAGRPPQPHSSPSASPTAVCLLCPQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMR
HAVCIFYLVLRALDTLEDDMTINIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLEDFP
TISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKRVMSEREWDKYCHYVAGLVGIGLSRL
FSASELEDPLIGEDTELANSMGLFLQKTNIIRDYLEDQREGREFWPQEAWSKYVNKLGDF
AKPENMDLAVQCLNELIASTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLAACYNN
QQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTRQIISTI
RSQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGER
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtcgcctgcggcaccaaggccatgtcccttttcaagcggaccttggtgctg
agccccggcgcggcgcccaggggcgcgggcactccgccgcgcggctgccccttgcccccc
gccgcttggccctccaaggaccggccgcggggagagggcgtgtgcggccggctgcggagc
cccgcggtagccggccgcccgccccagccccactccagcccctccgcgtctcccaccgcc
gtgtgtctcctctgcccgcaggactcgctcagcagcagcttgaaaacttgttacaagtac
ttgaatcagaccagtcgcagtttcgcagctgttatccaggcgctggatggggaaatgcgc
catgcagtatgcatattttatctggttctccgagcgctggacactctggaagatgacatg
accatcaatatagaaagaaaggtccccctgttacacaacttccactcgtacctttatgag
cccgactggcggttcacggagagcaaggagaaggaccgacaagtcctggaggactttcca
acgatctccctggagtttcgaaatctggctgagaaataccaaacagtgattgttgacatt
tgccggaagatgggatttgggatggcagagtttctggataagcgtgtgatgtctgaacgg
gagtgggacaagtactgtcactatgttgctgggctggtgggaattggcctttctcgtctg
ttctcggcctcagagttagaagatcccttaattggtgaagacacagagcttgccaactct
atgggcctgtttctgcagaaaacaaacatcatccgtgattatctggaagaccagcgagaa
ggaagagagttttggcctcaagaggcttggagcaagtatgtgaacaagctgggtgacttt
gccaagccagagaacatggacttggccgtgcagtgcctgaatgagctcatagccagcacg
ctgcaccacatccctgacgtcatcacttacctttcacgactcagaaaccagagcatattc
aacttctgtgctattccacaggtcatggccattgccactttggccgcctgttataataat
cagcaggtattcaaaggggtggtgaagatacgaaaagggcaagcagtcaccctgatgatg
gatgccaccaacatgcccgctgtaaaagctataatacaccagtacatggaagagatttat
cacagaatccccaactccgacccatgttctactaaaacaaggcagatcatctccacgatc
aggtcacagaatcttcccaactgtcagctcatctctcggagccactactcacccatttac
ctgtcgtttgtcatgctcctggcagccctgagctggcagtatctgagcaccctgtcccag
gtcacagaggactatgttcagaccggagaacgctga
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