Lagenorhynchus albirostris (white-beaked dolphin): 132525190
Help
Entry
132525190 CDS
T10760
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04068
FoxO signaling pathway
lalb05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
132525190 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
132525190 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lalb04121
]
132525190 (RAG1)
Enzymes [BR:
lalb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132525190 (RAG1)
Ubiquitin system [BR:
lalb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132525190 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1
RAG1_ZnC2
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
132525190
NCBI-ProteinID:
XP_060013711
LinkDB
All DBs
Position
9:complement(22126310..22129441)
Genome browser
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLSSVPDEIQHPHIKFSEWKFKLFRVRSFEKTPENAQAEKQDSSEGKHSLE
RSPAVLDTPGGQKPALTQLALKPHPKFLKKSHDDRKARDKAMHQANLRHLCRICGNPFKA
DGHNRRYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHNCW
IFMHRRFSSAPCEAYSPRNATMEWSSHTTPCDICHVARQGLKRKSHQPSAQLSKKLRTVI
DRAREVRRRKRRAQAGISSKELKKKIASCSKIHLSTQLLALDFPAHFVKSVSCQLCEHIL
ADPVETSCKHVFCRICILRCFKVMGNYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNEEVSLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRSAEKALLPGHHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILAGMRDQDLEDYLNGPFTVVVKE
SCDGMGDVGEKHGSGPAVPEKAVRFSFTIMKITIAHGSQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSRLMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHVDNLERYEVWRSNPYHETVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPSASKEERKRWQAALDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKYYEMEDVLKHHWLYTSKYLQKFMNAHNALKTSGFTIN
SQGSLGDSLDLEDCPESQNSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcagttccgtcccagacgaaatccagcac
ccacatattaaattttcagaatggaaatttaagctattcagggtgagatcctttgaaaag
acacctgaaaatgctcaagcggaaaagcaagattcctccgaagggaaacactctctagag
cgatctccagcagtcctggacacgcctggtggtcagaaaccagctctgactcaactggca
ttgaagccccacccaaagtttctgaagaaatcccatgatgacaggaaagcaagagacaaa
gccatgcaccaagccaacctgcgacatctctgccgcatctgcgggaatcctttcaaagcc
gatgggcacaataggagatacccagtccatgggcctgtggatggtaaaacccaagtcctt
ttacgaaagaaggaaaagagggccacgtcctggccagacctcattgccaaggttttccgg
atcgatgtgaaggccgatgtggactcgattcatcccactgagttctgccataactgctgg
atcttcatgcacaggaggtttagcagtgccccgtgtgaggcttactccccaaggaatgca
accatggagtggtcctcccacacaacaccctgcgacatctgccacgttgcccgtcaggga
ctcaagaggaagagtcatcagccaagcgcgcagctcagcaaaaaactcagaactgtgatt
gaccgagctcgagaagtccgtcggcgcaagaggagagcccaggccgggatcagcagcaag
gaactgaagaagaaaatcgccagctgcagtaagatacatctcagtacccagctcctggca
ctggacttcccggcgcactttgtgaaatctgtctcctgccagctttgtgaacacattctg
gcggaccctgtagagaccagctgtaagcatgtattttgcaggatctgcattctcagatgc
ttcaaagtcatgggaaattattgtccttcttgccggtacccctgcttccctactgacctg
gagagtccagtgaagtcttttctgagcatcttgaattccctgatggtgaaatgtccagcc
aaagagtgtaatgaggaggtcagcttggaaaaatataatcaccatgtctcaagccacaag
gaatcgaaagagactttcgtgcatattaataaagggggccggccccgccagcatctcctg
tccctgacccggagggctcagaagcaccgtctgagggagctcaagctgcaagtcaaggct
ttcgctgacaaagaagaaggtggagatgtgaaggcggtgtgcctgaccttgttcctgctg
gctctgagggcaaggaatgagcacagacaagccgacgagctggaggccatcatgcaggga
cggggctccggcctgcagccggctgtttgcttagccatccgtgtcaacaccttcctcagc
tgcagccagtaccacaagatgtacaggactgtgaaggccatcacaggcaggcagatcttc
cagcctttgcacgcccttcggagtgctgagaaggcccttctgccaggccaccaccccttc
gagtggcagccacctctgaagaacgtgtcttccagcactgacgtgggcattattgatgga
ctgtctggactgtcctcctctgtggatgactacccggtggacaccatcgccaagcgcttc
cgctatgattcagctttggtgtctgctctgatggacatggaagaagacatcctggcgggc
atgagagaccaagacctcgaggactacctgaatggccccttcaccgtagtggtgaaggag
tcttgtgatgggatgggagatgtgggtgagaagcacggcagtgggccagcagttccggaa
aaggcagttcggttttccttcacgatcatgaaaatcaccatcgctcacgggtcacagaat
gtgaaggtgtttgaggaagccaagcctaactctgaactgtgttgcaagcccttgtgcctc
atgctggcagatgagtctgaccacgagaccctgacagccatcctgagtcctctcattgcc
gagagggaggccatgaagagcagcagattaatgcttgagatgggaggcatcctccggact
ttcaagttcatctttaggggcactgggtatgatgagaaacttgtccgggaagtggaagga
ctcgaggcttccggctcagtctacatttgtaccctttgtgatgccacccgcctggaagcc
tctcaaaatcttgtcttccactccatcaccagaagccacgttgataatctggaacgctat
gaggtctggcgttccaacccataccacgagacggtggaggaactgcgggaccgggtgaag
ggggtctcggccaaacccttcattgagacggtcccttccatagatgcactccactgcgac
atcggcaacgccgctgagttctacaagattttccagctggagataggggaggtgtataag
aaccccagtgcctccaaagaggagaggaaaagatggcaggctgccttggacaagcacctc
cggaagaagatgaatctgaaaccaatcatgaggatgaatggcaactttgccaggaagctc
atgaccaaagagacggttgaagcagtttgtgaattaattccctccgaggagaggcacgaa
gctctgagggaactaatggacctttatttgaagatgaaacccgtctggcgatcatcatgc
cctgctaaggagtgcccagaatccctctgccagtatagcttcaattcacagcgttttgct
gagctcctctccaccaagttcaagtatagatacgagggcaaaatcaccaattattttcac
aaaaccctggctcatgtccctgaaattattgagagggatggctccattggggcctgggca
agtgagggaaatgagtctggcaacaaactgtttaggcgcttccggaaaatgaatgccagg
cagtccaagtactacgaaatggaagatgtcttgaaacatcactggttgtatacctccaaa
tacctgcagaagtttatgaatgctcataatgcattgaaaacttcagggtttaccataaac
tcccagggaagcttaggggactcattagacctagaggactgtccagaatctcaaaattca
atggaattttaa
DBGET
integrated database retrieval system
