Lagenorhynchus albirostris (white-beaked dolphin): 132525652
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Entry
132525652 CDS
T10760
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04141
Protein processing in endoplasmic reticulum
lalb04210
Apoptosis
lalb04217
Necroptosis
lalb04218
Cellular senescence
lalb04382
Cornified envelope formation
lalb05010
Alzheimer disease
lalb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132525652 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
132525652 (CAPN1)
04217 Necroptosis
132525652 (CAPN1)
04218 Cellular senescence
132525652 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132525652 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
132525652 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
132525652 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lalb01002
]
132525652 (CAPN1)
Enzymes [BR:
lalb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
132525652 (CAPN1)
Peptidases and inhibitors [BR:
lalb01002
]
Cysteine peptidases
Family C2: calpain family
132525652 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
132525652
NCBI-ProteinID:
XP_060014677
LinkDB
All DBs
Position
9:complement(7165581..7193087)
Genome browser
AA seq
721 aa
AA seq
DB search
MGIWMTEEVITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYDQLRVHCLQSGALF
RDEAFPPVPQSLGFKDLGPNSSKTYGIKWKRPTELFSNPQFIVDGATRTDICQGALGDCW
LLAAIASLTLNDTLLHRVVPHGQSFQDGYVGIFHFQLWQFGEWVDVVVDDLLPTKDGKLV
FVHSAQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYS
IILKALERGSLLGCSIDISSILDMEAVTFKKLVKGHAYSVTGAKQVNYQGQMVNLIRMRN
PWGEVEWTGAWSDGSPEWNNVDPYVREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPD
TLKSQRFRNWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEETDDPDDDDDYRSR
ESGCSFLLALMQKHRRRERRFGRDMETIGFAVYEVPPELMGRPAVHLKRDFFLANASRAR
SEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQIQANLP
DEQVLSEEEIDENFKSLFRQLAGEDMEISVKELQTILNRIIGKHKDLRTKGFSLESCRSM
VNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFRLNK
KLYELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMF
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggcatctggatgactgaggaggtcatcactccggtgtactgcaccggggtgtctgca
caagtgcaaaagcagcgggccaaggagctgggcctgggccgccatgaaaacgccatcaag
tacctgggccaggattatgatcagctgcgggttcactgcctgcagagtggggccctcttc
cgtgatgaggctttccccccagtgccccagagcctgggcttcaaggacctgggccctaac
tcctccaaaacctacggcatcaagtggaagcgtcccacggagctgttctcaaacccccag
ttcatcgtggatggagccacccgcacagacatctgccagggagcactgggggactgttgg
ctcctggcggccatcgcctcccttaccctcaatgacaccctcctgcaccgagtagttcca
catggccaaagcttccaggatggctatgtcggcatcttccatttccagctgtggcagttt
ggggagtgggtggacgtggtggtggatgacctgctgcccaccaaggacgggaagctggtg
ttcgtgcactctgcccaaggtaacgagttctggagtgctctgctggagaaggcctatgcc
aaggtgaatggcagctacgaggccctttcaggaggcagcacctccgagggctttgaggac
ttcacaggtggggtcaccgaatggtatgagctgcggaaggcgcccagcgacctatacagc
atcatcctcaaggcgctggagcgaggctccctgctgggctgctccattgatatctccagc
attctggatatggaggctgtcaccttcaagaagctagtgaagggccatgcctactctgtg
accggggccaagcaggtgaactaccagggccagatggtgaacctgatccggatgcggaac
ccctggggtgaggtggagtggacaggagcctggagtgacggctccccggagtggaacaac
gtagacccttatgttcgggagcagctccgggtcaagatggaggacggggagttctggatg
tccttccgagacttcatgcgtgagttcacccgcctggagatctgcaacctgacgcccgac
acgctcaagagccagaggttccgcaactggaacaccaccctgtatgagggcacctggcgg
cgggggagcaccgcggggggctgccgcaactacccagccaccttctgggtgaacccccag
ttcaagatccggctggaggagacggatgacccggacgacgacgacgactacaggagtcgg
gagtcaggctgcagcttcctgctcgccctcatgcagaagcaccgccgtagggagcgccga
tttggccgcgacatggagaccataggcttcgctgtctacgaggtccctccggagctgatg
ggcaggccggccgtgcacctgaagcgggacttcttcctggccaacgcgtctcgggcccgc
tccgagcagttcatcaacctgcgggaggtcagcacccgcttccgcctgccacccggggag
tatgtggtggtgccgtccaccttcgagcccaacaaggagggcgactttgtgctgcgtttc
ttctcagagaagagcgctgggacccaagagctggatgaccagatccaggccaatctccct
gacgagcaagtactctcagaagaggagattgatgagaacttcaaatccctcttcagacaa
ctggcaggggaggacatggagatcagcgtcaaggagctgcagaccatcctcaacaggatc
atcggcaaacacaaagacctgcggaccaagggcttcagcctggagtcctgccgcagcatg
gtgaacctcatggaccgtgacggcaacgggaagctgggcctggtggagttcaacatcctg
tggaaccgcatccggaattacctgtcaattttccggaagtttgacctggacaagtcgggc
agcatgagtgcctacgagatgcggatggccatcgagtctgcaggcttcaggctcaacaag
aagctgtacgagctcatcatcacccgctactcggaacccgacctggctgtggacttcgat
aacttcgtgtgctgcctagtgcggctggagaccatgttccggtttttcaagactctggac
acggatctggatggagtcgtgacctttgacttgtttaagtggttacagctgaccatgttc
gcatga
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