Lagenorhynchus albirostris (white-beaked dolphin): 132526203
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Entry
132526203 CDS
T10760
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132526203 (PCF11)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
132526203 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132526203
NCBI-ProteinID:
XP_060016124
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All DBs
Position
9:60029382..60056596
Genome browser
AA seq
1686 aa
AA seq
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MSEQTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEESSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGTAQSKLHVSQIPPMAVKSPHQVPVQPEKSRPGPSLQIQDMKGTNRDPRLN
RLSQHSSHGKDQSHRKEFLMNTLSQSDIKTSKTVPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKLSHTKDLKSQESESARVSDMSKRDPRLKRHLQDKTDSKDDDL
KEKRKTAEKKDKDEHMKSSEHRLVGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTPPSR
EERNAKRSTKQDVRDPRRIKKTEEERPQETANQHSTKSGTEPKENVENWQSSKSTKRWKS
GWEENKSLQQGDEHSKAPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQEDFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLTDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLYDGPSRPSVARDGPTKMI
FEGPNKLSPRIDGPPTPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGAQPVGSLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPSGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGMRFEGQHNQLGGNVRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQP
GPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFN
QSGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYF
DEKNLQSSQFGNFGNLPAPMTVGNIQASQQVLTGVAQPVAFGQGQQFLPVHPQNPGAFVQ
NPSGVLPKGYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPAEEEEDQ
NEDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQN
RTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEF
QSVPAGPAGSVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFD
CTPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATATEIKTEN
DTVESV
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtactgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcactcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccctcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaatgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaagttacgttcc
acctgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattcg
ttagatcctgcttggcctattaaacctctgccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaagagtcttcaacacctggcacagtggtc
agttcccctagcatctccactcctccaattgttccggatatacaaaagaatcttacccaa
gagcaactaataaggcagcagttactggcaaaacaaaagcagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggtcctggaactgcacaatccaaattacatgtttcacaa
attccccctatggcagttaaatctccccatcaggttcctgtgcaacctgagaaaagtcgt
ccaggtccatccttacaaattcaggatatgaaaggaactaaccgggatccccgtcttaat
aggttgagtcaacattcttctcatggaaaagatcagagtcacaggaaggaattcctaatg
aacacattgagccagtctgatattaagacaagtaaaactgtaccctctgaaaaactaaat
tcatccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaa
ttagattctaaatccaaatctaaatctaaatcaccatcacctttgaaaaacaaattatcc
cacacaaaagacttgaaaagtcaagaatctgaaagtgcaagggtgtctgatatgagcaag
agagatccaagattaaaaagacatcttcaggataagactgatagcaaagatgatgatcta
aaagagaagagaaaaactgcagaaaaaaaggataaagatgagcacatgaaatcatctgaa
cacagactggtgggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacc
ataacggaagaatcggaaaaacaggggacaaaaccagggagatcgagtactagaaagcga
tcaagatcacgatcacccaagtcccggtcaccgattatacattctcccaagagaagagat
aggcggtcacccaagcgaaggcaaaggagtatgtctccaacctcaacacccaaagctggg
aagattcgccagtcaggagttaagcagtcacatatggaagagtttacaccaccttccagg
gaagaaagaaatgcgaagagaagtactaaacaggatgttcgagatccaaggcgaataaaa
aagactgaagaggaacgaccacaagaaactgcaaatcagcattccaccaagtcaggcact
gaaccaaaagaaaatgtagaaaattggcaaagttccaagtctaccaaacgatggaaatct
ggttgggaagaaaataaaagtttacaacagggtgatgaacatagcaaagctcctcatcta
aggcatagggagagctggtcaagcactaaaggaatcttgtcacctcgagctccaaaacag
cagcatcgattaagcgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggaa
gacttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttaactgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtacgagaagagcagagatcaccattcaatgat
cgttttccacttaagcgacctagatatgaagattcagataaaccatttgtagatagccca
gcatcaagattcgccggccttgatacaaatcagcgacttacggctttagctgaagataga
ccattatacgatggacctagcaggccatcagtagcgagagatggcccaaccaagatgatt
tttgaaggacctaataagttaagccctagaattgatggacctcctacgccaggttctctt
cggtttgatgggtcaccgggacaaatggggggaggtggccctttgagatttgaaggacca
caaggccagttaggaggtgggtgtcctttgagatttgaaggtcctccgggaccagtaggg
acacctctgcggtttgaggggccaattggtcaagcaggaggaggtggttttcggtttgaa
ggttcccccggtctgaggtttgagggatctgcaggtggtttgcgatttgaaggaccaggg
gcccagcctgtgggtagtctcaggtttgagggacaccggggtcaacctgtgggtggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccgaggt
cagccagtaggtggacttagatttgagggaggtcatggtccatcaggggctgcaattagg
tttgatggacctcatggtcagccatcaggtgggatcagatttgagggcccgttgctacag
cagggagttgggatgagatttgagggcccccatggtcagtcagtagctggtatgagattt
gaagggcaacataatcaacttggtgggaacgttaggtttgagggtccacacggtcagcca
ggggttgggatcagatttgaaggacctttagtccaacaaggaggtggaatgaggtttgag
ggtccttctgtaccaggaggcggcctgagaatcgaaggacctctgggtcaaggtggtcca
agatttgaaggttgtcatgctttaaggtttgatgggcaaccaggtcagccatcactcttg
ccaagatttgatggattacatggtcagccaggtcctagatttgaaagaactggtcagcca
ggcccgcagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgta
cctcaaagatttgatggtccacaacaccagcaagcatcaaggtttgatattcctcttggt
cttcaaggcacacgatttgacaatcatccttcacaaaggcttgaatcggtatctttcaat
cagagtggcccatataatgatccacctggcaatgcttttaatgccccatcccaaggactg
cagttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatggacca
catggccctggaaaccagagtttctcgaatccccttaacagagcttctggacactatttt
gatgagaagaatcttcagagctctcagtttggaaactttggcaatttacctgctccaatg
acagtaggaaatattcaggcatctcagcaggttctgactggtgttgctcagccagtagca
tttggccaaggacaacaatttttgccagttcatccacaaaatcctggagcatttgttcag
aatccttcaggtgtccttcctaagggatatcctgataatcatctcagtcaggtggatgta
aatgaattgttttcaaaactgctaaaaacaggaattctcaaattgtcccagcctgattca
gctacaacacaagtaaatgaagttgctgctcagccccctgctgaggaggaagaagatcaa
aatgaagatcaagacgttccagatcttaccaattttacaattgaagaattgaaacaacgt
tatgatagtgttataaatcgactgtatactggtattcagtgttactcttgtggaatgagg
tttacaacatcacagacagatgtatatgcagatcacttggactggcattatcgacaaaat
agaactgaaaaagatgtaagcagaaaagtcactcatagacgttggtactacagtttaaca
gactggatagaatttgaggaaatagctgatctggaagaacgtgcaaagagccagtttttt
gaaaaggtgcacgaagaagtcgtgctcaaaactcaggaggctgctaaagaaaaggagttc
caaagtgtacctgctggaccagcaggatcagttgagagttgtgaaatttgtcaagaacaa
tttgaacagtactgggatgaagaagaggaggagtggcatttaaaaaatgctattagagta
gatggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgat
tgtacaccatctcccagcaagacaccagttgaaaatcccttgaacattatgttgaacatt
gttaaaaacgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacggattgat
actccaccagcttgtacagaggaaagcatagcgacagccactgaaattaaaacagaaaat
gacacagtcgagtcagtttaa
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integrated database retrieval system
