Lagenorhynchus albirostris (white-beaked dolphin): 132526841
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Entry
132526841 CDS
T10760
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lalb04121
]
132526841 (PDZRN3)
Enzymes [BR:
lalb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132526841 (PDZRN3)
Ubiquitin system [BR:
lalb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
132526841 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
CEP104_ZnF
JmjN
Motif
Other DBs
NCBI-GeneID:
132526841
NCBI-ProteinID:
XP_060017323
LinkDB
All DBs
Position
10:17382805..17629424
Genome browser
AA seq
1071 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVATPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQMVDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIEGIHQEMEREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEDNKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
GVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDAPAASPPL
AGQRKLTCSQDTLGSSDLPFSNESFISADCADADYLGIPVDECERFRELLELKCQVKSAS
PYGLYYPGSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYREPWM
LHNSGFRNYNTSVDVRRRELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RAAEGVGGVGGPGSEGAAGTTEAYGPSPRNLLSITEDPEVGSPDYSPSPEELDPSQALEG
KERKPSEDGSGSPTPSQKLGGGSYLSPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEY
AQSQMSLVSMCKDLNSANQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERS
GMTTDDDAVSELKMGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQGADDRKEM
NILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttttgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctc
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctcgacatc
aagtgcgcgcatgcggcgcgcggctgcggccgggtggtcaagctgcaacagctgcccgag
cacctcgagcgctgcgacttcgcgcccgctcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaggagggctgcgggctgcccctgacgcacggcgagcagcgcgccggcggccac
tgctgcgcgcgggccctgcgggcgcacaacggcgcactgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcgggcaagcgcgagaagtcgctggtggca
cagctggccgccgcccagctggagctgcagatgaccgctctgcgctaccagaagaagttc
accgagtacagcgcacgcctcgactcgctcagccgctgcgtggccacgccgcccggcggc
aagggtgaagaaacaaaaagcctgactcttgtcctgcatcgggactccggctccctggga
ttcaatattatcggtggccggccgtgtgtggacaaccaagatggatcgtccactgaagga
atcttcgtatccaaaatagttgacagtggacctgcagccaaggacggaggcctgcaaatt
cacgacaggattatcgaggttaatggcaaagacttatccagagccactcatgaccaggct
gtggaagccttcaagacagctaaggagcccatcgtggtccaggtgttgaggcgaacgcca
cggaccaaaatgttcacgcctccttcagagtcacagatggtggacacgggaacccaaacg
gacatcaccttcgagcacatcatggctcttaccaagatgtcctcgcccaccccacctgtg
ctggatccctatctcttgcccgaggagcatccctcagcccatgaatactacgatccaaat
gactacattgaaggcatccatcaggagatggagagagaggagctggagctggaggaagtg
gatctctacagaatgaacagccaggacaagctgggcctcacagtatgctaccggacggac
gatgaagatgacattgggatctatataagcgagatcgacccgaacagcatcgcggccaag
gatgggcgcatccgagaaggagaccgcatcatccagattaacgggatagaggtacagaac
cgcgaagaggccgtggctctgctaaccagtgaagacaacaagaacttttccttgctaatt
gcaaggcccgaactccagctggacgaggggtggatggacgacgacagaaacgactttctg
gacgacctgcacatggacatgctggaagagcagcaccaccaggccatgcagttcaccgcc
ggcgtgctgcagcagaagaagcacgaggaagacgggggaaccacagacacggccaccatc
ctgtccaaccagcacgagaaggacagcggcgtgggccggacggacgagagcacgcgcaac
gacgagagctcagagcaggagaacaacggcgacgacgcccccgcggcctccccgccactg
gccggccagaggaagctcacgtgcagccaggacaccctgggcagcagcgacctgcccttc
agcaacgagtccttcatctcggccgactgcgccgacgccgactacctgggcatcccggtg
gacgagtgcgagcgcttccgcgagctgctggagctcaagtgccaggtgaagagtgccagc
ccctacggcctgtactacccgggcagccccctggacgccagcaagagcgacccggagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcgcacaagatgcagcagctcaaggagcagtaccgcgagccctggatg
ctgcacaacagcggcttccgcaactacaacaccagcgtcgacgtgcgcaggcgcgagctc
tcggacatcaccgagctccccgagaagtccgacaaagacagctcgagcgcgtacaacaca
ggcgagagctgccggagcaccccgctcaccttggagatgtcccccgacaactctctgagg
cgagcggccgagggcgtcggcggcgtcggcggccccggcagcgaaggcgccgcggggacc
accgaggcgtacgggccgtccccaaggaatctgctctccatcacggaagatcccgaagtg
ggctccccggactacagcccttcccctgaagagctggaccccagccaggccctggagggc
aaggagaggaaacccagcgaggacggcagcgggagccccacccccagccagaagctgggc
ggcggctcgtacctgtcgcccttcccgcactccccctacaaacacgcccacatcccggcg
cacgcgcagcactaccagagctacatgcagctgatccagcagaagtcggccgtggagtac
gcgcaaagccagatgagcctggtgagcatgtgcaaggacctgaactcggccaaccagtcg
gagccgagaatggagtggaaagtgaagatccggagcgacgggacgcgctacatcaccaag
cggccggtgcgggatcgcctgctgcgggagcgcgcgctcaagatccgcgaggagcgcagc
ggcatgaccacggacgacgatgcggtgagcgagctgaagatggggcggtactggagcaag
gaggagaggaagcagcacgtggtgaaggccaaggagcagaggcggaggcgcgagttcatg
atgcagagccggctcgactgcctgaaggagcagcaaggggccgacgacaggaaggagatg
aacatcctggaactcagccacaaaaagatgatgaagaagaggaataaaaagatatttgat
aactggatgacgatccaagaactcttaacccacggcacgaaatctccagacggcactaga
gtgtacaattcgttcctatcggtgactactgtataa
DBGET
integrated database retrieval system
