Lagenorhynchus albirostris (white-beaked dolphin): 132526924
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Entry
132526924 CDS
T10760
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03082
ATP-dependent chromatin remodeling
lalb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132526924 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
132526924 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lalb03021
]
132526924 (PBRM1)
03036 Chromosome and associated proteins [BR:
lalb03036
]
132526924 (PBRM1)
Transcription machinery [BR:
lalb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132526924 (PBRM1)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
132526924 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132526924
NCBI-ProteinID:
XP_060017587
LinkDB
All DBs
Position
10:36195468..36297336
Genome browser
AA seq
1725 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPSYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSVHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMTKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTNKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTLDS
EMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILE
PMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKE
LGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIF
LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL
IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL
AEIPAVDPSFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYED
AVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEE
KREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW
EDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYF
KLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANA
DKGDDEKNTDNSEDSRTEDSYNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETC
PMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPTVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQ
LQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDY
SFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALM
GVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLP
PGVPGLPGIPPPGVMNQGVAPMVGAPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPPGPP
VIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQ
ESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENL
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggagctggttgtgctctggtaaagctgaagaagttggat
tccatgggttccaagagaagaagagctacctccccttccagtagtgtcagcggagacttt
gatgatgggcaccattctgtgtccacgccaggcccaagcaggaaaaggaggagactttcc
aatcttccgactgtagaccctattgccgtgtgccatgaactctacaacaccatccgagac
tataaggatgagcagggcaggctcctctgtgagctcttcattagggcaccaaagcgaaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacag
aaactaaaaatggaagagtatgatgatgttaatctgctgactgctgacttccagttgctt
tttaacaatgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaa
ctctgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgat
gaagatgatgatgaagatgggcaagacaatcaaggcacagtgactgaaggatcttctcca
agttacttgaaggagatcctggagcagcttcttgaagccatagttgtagccacaaatcca
tcaggacgtctcattagcgaactttttcagaaactgccttctaaagtgcaatatccagac
tattatgcaataattaaggagcctatagacctcaagaccattgcccagaggatacagaat
ggaagctacaagagtgttcatgcaatggccaaagatatagatctcctagcaaaaaatgcc
aaaacttataatgagcctggttctcaagtattcaaggatgcaaattctattaagaaaata
ttttacatgaaaaaggcagaaattgaacatcatgaaatgactaagtcaagccttcggatg
aggactccatcaaatttggctgcagccaggctgacaggtccttcgcacagtaaaggcagc
cttggtgaagagagaaatcccactaacaagtactaccggaataaacgagcagtccaaggg
ggtcgtttatcagcaattaccatggcacttcagtatggctcagaaagtgaagaggatgct
gctttagctgctgcacgttatgaagaaggagagtcggaagcagagagcattacttcattt
atggatgtttcaaatcctttttatcagctttacgacacagttaggagctgtcggaataac
caagggcagctaatagctgaaccttttttccatttgccttcaaagaaaaaataccctgat
tattatcagcaaattaaaatgcccatatcactacaacagatcagaacaaagctaaagaat
caagaatatgaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgcc
aaacgctataatgttcccaactcagccatctacaagcgagttctaaaactgcaacaagtc
atgcaggcaaagaagaaggagcttgccaggagagatgacattgaggatggagacagcatg
atttcttcagcaacctctgatactggtagtgccaaaagaaaaaggaacactcttgacagt
gagatgttgggtctcaggaggctatccagtaaaaagaacattcgaaagcagcgaatgaaa
atcttgttcaatgttgttcttgaagctcgtgagccaggttcaggcagaagactttgtgat
ctatttatggttaaaccatccaaaaaggactatcctgattattataaaatcatcttggag
ccaatggacttgaaaataattgaacataacatccgcaatgacaaatatgcaggggaagag
ggaatgatagaagacatgaagctgatgttccggaatgccaggcactacaacgaggagggc
tcccaggtgtacaatgatgcgcacatcctggagaagttactcaaggataaaaggaaagag
ctgggcccactgcctgatgatgatgacatggcttctcccaaactcaaactgagtaggaag
agcggtatttctcctaaaaaatcaaaatatatgactccaatgcagcagaaactaaatgaa
gtctatgaagctgtaaagaactatactgataagaggggtcgccgcctcagtgccatattt
ctgaggcttccctccagatctgagctgcctgactactatttgaccattaaaaaacccatg
gacatggaaaaaattcgaagccacatgatggccaacaaataccaagatatagactccatg
gttgaggacttcgtcatgatgtttaacaatgcctgtacatacaatgagcccgagtctttg
atctacaaagatgcccttgtcctacacaaagtcctgcttgaaactcggagagacctagaa
ggagatgaggactctcatgtcccaaatgtaaccttgctgattcaggagcttatccataat
ctttttgtgtcagtcatgagtcatcaggatgatgaaggaagatgctacagtgattcccta
gcagaaattcctgctgtggatcccagttttccaaacaaacctcctcttacttttgacata
attaggaagaatgttgaaaataatcgctaccggcggctcgatttatttcaagagcatatg
tttgaagtattggagagggcaagaaggatgaatcggacagattctgaaatatatgaggat
gcggtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagag
atccttctttcaccagcactcagctataccacaaaacatttacataatgatgtggagaaa
gagaaaaaggaaaaactaccgaaagaaatagaggaagataaactaaaacgagaagaagaa
aaaagagaagctgaaaagagtgaagattcctctggagctgcaggcctctcaggcttacat
cgcacatacagccaggactgcagctttaagaacagtatgtaccatgttggagattatgtc
tatgtggagcctgcagaggccaatctacaaccacatatagtctgtattgagagactgtgg
gaagattctgctggtgaaaaatggttgtatggctgttggttttatcggccaaatgaaaca
ttccatttggctacacgaaaatttctagaaaaagaagtttttaagagtgactattacaat
aaagttcctgttagtaaaattctaggaaaatgtgtggtcatgtttgttaaggaatacttt
aaattatgcccagaaaactttcgagatgaggatgtttttgtctgtgaatcacggtattct
gccaaaaccaaatcttttaagaaaattaaactatggaccatgcccatcagctcagttaga
tttgtccctcgagatgtgcccttgcctgtggtccgagtggcctctgtatttgcaaatgcg
gataaaggggatgatgaaaagaacacagacaactcagaggacagtcgaactgaagacagt
tataacttggaaaaggagaaagaagatgtccctgtggaaatgtctaacggtgaaccaggt
tgccactactttgagcagctccggtataatgacatgtggctgaaggttggcgactgtgtc
ttcatcaagtcccatggcctggtgcgccctcgtgtgggcagaattgaaaaggtatgggtc
cgagatggagctgcatatttttacggccccatctttattcacccagaagagacggaacac
gagcccacaaaaatgttctacaagaaagaagtgtttctgagtaatctggaagaaacctgc
cccatgacatgtattctaggaaagtgtgctgtattgtcattcaaggacttcctctcctgc
aggccaactgaaattccagaaaatgacattctgctttgtgagagccgctacaatgaaagt
gacaagcagatgaagaaattcaagggactgaagaggttttcactctctgctaaagtggta
gatgatgaaatttattacttcagaaaaccgactgttcctcagaaggagccctcaccttta
ttggaaaagaagatccagttgctagaagctaaatttgctgagttagaaggtggagatgat
gatattgaagagatgggagaagaggatagtgaggtcattgagcctccttctctacctcaa
cttcagactcccctggccagtgagctggatctcatgccctacacacccccacagtctacc
ccaaagtctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagt
ggctacatcctgttcagcagtgagatgagagctgtgattaaggcccagcacccagactac
tcttttggtgagctcagccgactggtggggacagaatggagaaaccttgagacagccaag
aaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagca
gcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatg
ggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgca
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccccggggggcctccaccccaccatcttccg
ccaggtgtgcccggcctcccgggcataccaccaccgggtgtgatgaaccaaggagtggcc
cctatggtaggggctccagcaccaggtggaagtccatatggacagcaggtaggtgttttg
gggcctccagggcagcaggcaccacctccatatcctggcccacatccacccggcccccct
gtcatacagcagccaacaacacccatgtttgtggctcccccaccgaagactcaacggctt
ctccactcagaggcctacctaaaatatattgaaggactcagtgctgagtccaacagcatt
agcaagtgggaccagaccctagcagcccgaagacgcgatgtccatttgtcaaaagaacag
gagagccgactcccctctcactggctgaaaagtaaaggggcccacaccaccatggcagac
gccctctggcgccttcgggatctgatgctccgagacaccctcaatattcgccaagcatac
aatctagaaaacctttaa
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integrated database retrieval system
