Lagenorhynchus albirostris (white-beaked dolphin): 132527005
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Entry
132527005 CDS
T10760
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04137
Mitophagy - animal
lalb04140
Autophagy - animal
lalb05014
Amyotrophic lateral sclerosis
lalb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132527005 (OPTN)
04137 Mitophagy - animal
132527005 (OPTN)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132527005 (OPTN)
05022 Pathways of neurodegeneration - multiple diseases
132527005 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lalb04131
]
132527005 (OPTN)
Membrane trafficking [BR:
lalb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132527005 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
132527005 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
132527005 (OPTN)
Xenophagy
Cargo receptors
132527005 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CMD
Motif
Other DBs
NCBI-GeneID:
132527005
NCBI-ProteinID:
XP_060017835
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Position
1:183867511..183909837
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AA seq
566 aa
AA seq
DB search
MSHQPVSCLTEKGDSPNETTGNGPPSLAHPNLDTFTPHELLQQMRELLIENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERLFFETQSREAKERLTALSLENEKLKQDLGKLKGKTER
SFEVPKAEAEQEVEQLKTQVARLQAEKVDLLGIVSELQLKLNSGGPSEDSFVEIRMAEGE
AAVATKEIKPSPGPTRTDSIDTSKSAEGARNYLEFEELTVSQLLLCLREGNQKVERLELA
LKEAKERISDFEKKAKDHCEIETQTEGHTEQEKEEEKGTETVGSEVETLNLQVTTLFKEL
QEAHTKLSEADLMKKRLQEKCQALERKNSPTPSELNEKQELVYSNRKLELQVESMRSEIK
MEQAKTEDEKSKLATLQLTHNRLLQEYNNALKTTEELKRRESEKVDKVVLQELSGKLELA
EKALASKQLQMDEMKQTIAKQEKDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQMA
LQLAILLKENNAFEDEGRQSLMEMQSRHGARASDADQQAYLFQRGAEDRNWMQQEQQNIP
IHSCPKCGEVLPDIDTLLIHVTDCII
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccaaccagttagctgcctgactgaaaagggggacagccccaacgaaaccaca
ggaaatggaccccccagtctggctcacccgaacctggacacgttcaccccgcatgagctg
ctgcagcagatgagagagcttctaattgagaaccatcagctgaaagaagccatgaagctg
aacaatcaagctatgaaagggcgatttgaggagctttcagcctggacagaaaagcagaag
gaagaacgccttttttttgagacccagagcagagaagccaaagagcgcctaacggcactg
agtcttgaaaatgaaaaactgaagcaggacctcggaaaactaaaagggaaaactgaaagg
tcattcgaggtccccaaggcagaagcagaacaggaagtggaacagctgaagacccaggtg
gcacgccttcaagctgaaaaggtcgatctgctgggcatcgtgtctgaattacaactcaag
ctgaactcaggtggcccctccgaagactcctttgttgaaatcaggatggctgagggagaa
gcagctgtggcaacgaaagaaatcaagccaagtcctgggcccacgagaactgattccatt
gacacgagcaaatctgcagaaggtgccaggaattatttggaatttgaggaattaactgtg
agccagctcctgctttgtctaagggaaggaaaccagaaggtggagagacttgaacttgcc
ctcaaggaagccaaagaaagaatttctgattttgaaaagaaagcgaaggatcattgtgag
attgagacccagacagaggggcacacagaacaagagaaagaagaggagaaaggcacggaa
actgttggaagtgaagtggaaacgttgaaccttcaggtgacaaccctgtttaaggagctt
caggaggctcacacgaaactcagtgaggctgacctgatgaagaagagacttcaggaaaaa
tgtcaggcccttgaaaggaaaaattctccaaccccatcagagctgaatgaaaagcaagag
cttgtttatagtaacagaaagttagagctccaagtagaaagcatgcgatcagaaatcaaa
atggagcaagcaaaaacagaagatgaaaagtccaaattagccactctacagttgacacac
aacaggcttcttcaagaatacaataatgcactgaaaacaactgaggaactaaaaagaaga
gagtcggaaaaagtggataaggtggtgctgcaggaactgagtggaaagctggaactggca
gagaaggccctggcttccaagcagctccaaatggatgagatgaagcagaccatcgccaag
caggagaaggacctggaaaccatggctgttctcagggctcagatggaggtttattgttct
gactttcatgcagaaagagcagcaagagagaagattcatgaagaaaaggagcaaatggca
ttgcagctggcaattctgctgaaagagaataatgcttttgaagatgaaggcaggcagtcc
ctgatggaaatgcagagccgtcatggggcgagagcaagtgacgctgaccagcaggcttat
ctctttcaaagaggagctgaggatagaaactggatgcagcaggaacaacagaatattcca
attcattcttgccccaaatgtggagaagttctgcccgacatagatacactactgattcat
gttacagactgcatcatttaa
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