Lagenorhynchus albirostris (white-beaked dolphin): 132527099
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Entry
132527099 CDS
T10760
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lalb04040
]
132527099 (SCN11A)
Ion channels [BR:
lalb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132527099 (SCN11A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
132527099
NCBI-ProteinID:
XP_060018174
LinkDB
All DBs
Position
10:complement(42958654..43037075)
Genome browser
AA seq
1853 aa
AA seq
DB search
MSCEQFHVVELALELPLPERLQLPGAGAWTLRETCSVESFKRYHRGCCLEPPYQEAELSE
DLLLVSALRVKMDDRRCPVIFPDARNFRPFTPDSLAAIKKRIAIQKEKKKSKDQTAAEPQ
PRPQLDLKVSRKLPMLYGDIPHELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRAL
FILGPFNSIRSLAIRISVHSLFSMFIICTVIINCVFMAMTRGKDSINIDTESAEYVFTGI
YIFEALVKILARGFILDEFSFLRDPWNWLDSIVIATAFVSYSPYIKDSSISLSSLRTFRV
FRALKAISVISGLKVIVGALLRSVKRLIDVMILTLFCLSIFALVGQQLFMGNLNQKCVRK
DCDSDYKDYCFEKKDSTEFRICGTWMESGACSEQFECKHTNKNPDYNYTNFDSFGWSFLA
VFRLMTQDSWEKLYQQTLRTSGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNKNVA
AETEAKEKMFQEAQQLLKEEKEALVAMGIDRSSLSSLEASSFSLKKRKLFGNKKRKSFFL
RKSGKDQVPGLDSDEDSSKKPHLLEQTKRLSQNLSVEHCDEHRDPFQRQRALSAVSILTI
TMHEQEKSQEPCLPCGENLASKYLVWDCSPRWLCIKKALRTMMTDPFTELATTICIIINT
LFLAMEHYKMDQSFENMLYTGNLVFTGIFMAEMCLKIIALDPYHYFHGGWNIFDSIVALL
SFAEVIINSMCPGKQSCMSLRSLRVLRVFKLAKSWPTLNTLLKIIGHSVGALGNLTVVLA
IVVFIFSVVGMQLFGSKFNCIKSNSKSHDPAVPCLRRWHMGDFYHSFLVVFRILCGEWIE
NMWECMQEANQALCIIVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGHLEGEVRKTKVQ
LALDRFCRAFCFVICTLEHFCTKWCRRQHLPKEEEVTEGPEAESKGVIPLVTEMRKGPET
WEEFGVLTSAPKTLSVGHDRTWLAPLAEEEDDAESPGEDKAQPITQPEAGKQASELPQKT
KEPTSPGAQSVEMDIFSEGDLYLSVQNPRKKSDATSVLSECSTTGPQDPFRRVLEMVPKK
EPERCLPKGLDCCSPCCTMDKRKFPWIIWWNLRKTCYQIVKHSWFESFIIFVILLSSGAL
VFEDIYLGTQPKIQKILNCTDSIFTYIFILEMGLKWVAFGFRKYFTSAWCWLDFIIVIVS
VTSLIDLKVLKSFRILRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFC
ILGVNLFSGKFGRCVNVTDGNSVINYNIVANRSQCESGNFSWFTLKVNFDNVGMAYLALL
QVATFKGWMDIMYAAVDSRGEGQQPRFEENSLMYVYFVVFIIFGSFFTLNLFIGVIIDNF
NQQQKKISGQDIFLTEEQKKYYNAMKKLGSKKPQRPIPRPLNKCQGLVFDLVTHQVFDII
IIILIFLNMVSMMAESYGQSRAMELFLERLNLAFVAIFTTECLIKIFALRQYYFTSGWNL
FDCVIVVISIVSTIVSALKTQAHIPFPPTFFRIVRLARIGRILRLVQAARGIRTLLFALM
MSLPSLFNIGLLLFLVMFIYAIFGMNCFCKVKEESGIDDIFNFKTFKGSMLCLFQITTSA
GWDALLSPMLQSKDSCNPKSENCHLSAIAITYFVSYIIISFLIVVNMYIAVILENFNIAT
EESEDPLGEDDFEIFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMD
LPMVSGDRLHCLDILFAFTARVLGESSGLDSMKAVMEEKFMEANPFKKLYEPIVTTTKRK
EEERCAAVIQKAFRKYMMKTKCTLEDRPHSPLQTLCNGDLSSSGVAEGKVHYD
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgaacagtttcacgttgtggaacttgctttggagctgcccctcccagaaagg
cttcaattgccaggagcaggagcttggactctgcgagagacttgctctgtggagagcttc
aagaggtaccacaggggctgctgcctggagccaccttaccaggaggcagagctctctgag
gatctgctgcttgtctctgccctgagggtgaagatggatgacaggcgctgcccggtgatc
ttcccagatgcgaggaatttccgccccttcactcctgactctttggctgcaatcaagaag
cggatcgccatccagaaggagaaaaaaaagtccaaagaccagacagcagcagaaccccag
cctcgacctcagcttgacctaaaggtgtccagaaagttgcccatgctctatggtgacatt
ccccatgagctgatagggaagcccctggaagacttggacccattctacagaaatcataag
acatttatggtgttgaacaaaaagagaacaatctaccgcttcagtgccaaacgtgccttg
ttcattttggggcctttcaattcaatcagaagtttagccattagaatttcagtccattca
ttgttcagcatgttcatcatctgcaccgtcatcatcaactgcgtgttcatggccatgact
cgtgggaaggacagcattaacatagatactgagagtgctgagtatgtcttcactgggatt
tatatatttgaagcattagttaaaatattggcaagaggttttattctggatgagttttct
ttccttcgagatccgtggaactggctggactccattgtcattgcaacagcgtttgtgtca
tattcaccatatatcaaggacagcagcatcagtctgtcatccctgcgtaccttccgagtg
ttcagagctttgaaagcaatttcagtaatttcaggtctgaaggtcattgttggggccttg
ctgcgctctgtgaagaggcttatcgatgtgatgatcctgactctcttttgcctcagcatc
ttcgccctggtaggtcagcagctcttcatgggaaatctgaaccagaaatgtgtgaggaaa
gactgtgactctgactataaagactattgctttgaaaagaaagattccactgaattcaga
atatgtggcacatggatggagagcggggcttgttctgaacaatttgaatgcaaacatacc
aataaaaatcctgactataattacacgaattttgacagctttggctggtcttttcttgcc
gtgttccggcttatgacccaagattcctgggagaagctttatcaacagactttgcgcacc
tcagggctctactcagtcttcttctttgtggtggtcatcttcctgggctctttctacttg
attaacttaaccctggccgttgtcaccatggcttacgaggaacagaacaagaatgtagct
gctgagacagaagccaaggagaagatgttccaggaagcccagcagctgttaaaggaggag
aaggaggctctggttgccatgggtattgacagaagttcacttagttcccttgaagcatca
tctttttccctgaagaagagaaagctatttggtaataagaaaagaaaatccttctttttg
agaaagtctgggaaagaccaggttccaggattagattctgatgaagattcttcaaaaaag
ccacacctacttgaacaaaccaaacgactgtcccagaatctgtcagtggagcactgtgat
gagcacagagaccccttccaaaggcagagagcactgagcgctgtgagcatcctcaccatc
accatgcacgaacaagaaaaatcacaggaaccttgcctcccatgtggggaaaacctggca
tccaaatacctcgtgtgggactgtagcccccggtggctgtgcattaagaaggccctgaga
accatgatgactgacccctttactgagctggccaccaccatctgcatcataatcaacact
ctcttcttggccatggagcattacaaaatggaccagagttttgagaacatgttatacaca
gggaatttggttttcactggcattttcatggctgaaatgtgcctaaaaatcattgcgctg
gatccctaccactactttcacggaggctggaacatttttgacagcattgttgctcttctg
agttttgcagaggtgataataaatagtatgtgtccaggaaaacaaagttgtatgtcactt
cgttccttaagagtgctgagggtcttcaagttagccaaatcctggccaactttaaacaca
ctgcttaagataattggccattccgttggagcccttggaaacctgactgtggtcttggcc
attgtggtctttattttctcagtagttggcatgcagctttttggctctaaattcaattgc
ataaagagtaattcaaagtcccatgaccctgcagtcccatgtttacgacgctggcacatg
ggggatttctaccactcctttctggtggtattccgcatcctctgtggggaatggatcgaa
aacatgtgggaatgtatgcaagaagctaaccaagcactgtgcattattgtgtttctgttg
atcatggtgataggaaaactcgtggtactcaacctcttcattgccttgctgctcaattcc
ttcagcaatgaggagagagatggacacttggaaggagaggtcaggaaaaccaaagtccag
ttagccttggaccggttctgccgggctttttgttttgtcatatgcactcttgagcatttt
tgtaccaagtggtgcaggagacaacatttaccaaaggaagaagaggtgacagaaggccct
gaggcagagagcaaaggtgtcattcccctggtcacagagatgagaaagggcccagagacc
tgggaggagtttggtgtactgacttccgcaccaaagaccttgagtgtcgggcatgatcgg
acttggttggccccactagcagaggaagaagatgatgctgaatcccctggtgaagataag
gcacagcctatcacacaacctgaggctggaaaacaggccagtgaactccctcagaagacc
aaggagcccaccagtccaggagctcagagtgtggaaatggacatattctctgaaggtgat
ctttatctgtcggtacagaatccccgaaagaagtctgatgctacgagtgtgctctcagaa
tgcagcaccactggtccacaggatccctttaggcgggtacttgaaatggttcccaaaaag
gaaccagagagatgtttgcccaaaggcctggattgctgctctccatgctgtactatggac
aagaggaagttcccctggatcatttggtggaacctgcggaaaacctgctatcaaatagtg
aaacacagctggtttgagagctttattatctttgtgattctgctgagcagtggggcactg
gtatttgaagatatttaccttggtacacaacccaaaatccaaaaaatacttaattgtact
gacagtattttcacatacatttttatcttggagatgggtctgaaatgggtggcctttgga
tttaggaagtatttcaccagtgcctggtgctggctcgatttcatcattgtgattgtctct
gtgaccagtctcatcgacttaaaggtcttgaagtccttccggattctgcgagcgctgagg
cctctgagagcactgtcccagtttgaaggaatgaaggtggtagttaatgctctcataggt
gccatacctgccatcctgaatgttttgcttgtctgcctcattttctggctcatattttgt
atcctgggagtaaatttgttttctggaaaatttggaagatgtgttaatgtaacagatgga
aactcagttataaattacaacattgttgcaaaccggagtcaatgtgaaagtggaaatttc
tcctggttcaccctgaaagtcaactttgacaatgtgggaatggcttacctcgcgctgctg
caagtggcaacatttaagggctggatggatattatgtatgcagctgttgattccagaggg
gaaggacaacagccaaggtttgaggagaactcattaatgtatgtttacttcgtagttttt
atcatctttggctcattcttcacgctgaatctctttattggtgttattattgacaacttc
aaccaacagcagaaaaagataagtggccaagacatctttctgacagaagaacagaagaaa
tactataatgcaatgaaaaaattaggatccaaaaaacctcaaaggcccatcccaaggcct
ctgaacaaatgccagggtcttgtttttgacctagttacacaccaggtctttgacatcatc
atcatcatcctcattttcctcaacatggttagcatgatggctgaatcatatggccagtcc
agagccatggaactcttccttgagcgtctcaacctggcctttgtggccatctttacaact
gagtgtctcatcaaaatctttgctttgaggcaatactacttcaccagtggctggaattta
tttgattgtgtgatcgtggtcatttctattgttagtacaattgtttctgccttgaaaacc
caggcacacattcctttccctccaacattcttcagaattgtccgcttggctcggattggc
cgaatcctgagacttgttcaggcagcacgaggaatcagaactctccttttcgcgctaatg
atgtctcttccctctctattcaatattggtcttctactctttctggttatgtttatttat
gccatttttggtatgaactgtttttgcaaagtgaaggaagagtctggaattgatgacata
ttcaacttcaaaactttcaaaggcagcatgctctgcctcttccagataaccacatcagca
ggctgggatgccctcctcagccccatgttgcaatcaaaagactcatgtaaccccaagtca
gagaactgtcacctctctgccatagccataacctacttcgtcagttatatcatcatctcc
tttctcatcgtggtcaacatgtatattgctgtgattttagaaaacttcaatatagccact
gaagaaagtgaggaccctttgggtgaagacgactttgaaatattctacgaagtctgggaa
aagtttgacccggaagcaacacaatttatcaaatattctgctctttctgactttgctgat
gcccttcctgagcctctccgtgtggcaaagccaaataaataccaatttttagtcatggac
ttgcccatggtgagcggagatcgccttcattgtctggatatcctgttcgctttcactgct
agggtacttggtgagtccagtggcctggatagcatgaaagcagtgatggaggagaagttc
atggaagccaaccctttcaagaagttatatgaacccatagtcaccaccaccaagaggaag
gaagaggaaagatgtgctgctgtaattcaaaaggcctttcgaaagtacatgatgaagacc
aagtgtaccttggaagacaggcctcattcacccctccagacactctgcaatggagacttg
tccagctctggggtggccgagggcaaggtccactacgactga
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