Lagenorhynchus albirostris (white-beaked dolphin): 132527262
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Entry
132527262 CDS
T10760
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04820
Cytoskeleton in muscle cells
lalb05169
Epstein-Barr virus infection
lalb05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132527262 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
132527262 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
132527262 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalb03019
]
132527262 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lalb04812
]
132527262 (VIM)
04147 Exosome [BR:
lalb04147
]
132527262 (VIM)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
132527262 (VIM)
Cytoskeleton proteins [BR:
lalb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
132527262 (VIM)
Exosome [BR:
lalb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132527262 (VIM)
Exosomal proteins of other cancer cells
132527262 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
TPR_MLP1_2
RBD-FIP
Sec10_N
Laminin_II
GeBP-like_DBD
DUF4515
CENP-F_leu_zip
GAS
Motif
Other DBs
NCBI-GeneID:
132527262
NCBI-ProteinID:
XP_060018633
LinkDB
All DBs
Position
1:187433105..187440791
Genome browser
AA seq
466 aa
AA seq
DB search
MSSRSVSSSSYRRMFGGPGTASRPSSSRSYVTTATRTYSLGSALRPGTSRSLYASSPGGV
YATRSAAMRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLSE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccctggcacc
gcgagccggccgagctccagccggagctacgtgaccacggccacccgcacctacagcctg
ggcagcgcgctgcgccccggcaccagccgcagcctctacgcctcgtccccgggcggcgtg
tacgccacgcgctccgcggccatgcgcctgcggagcagcgtgcccggcgtgcgcctgctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcag
gtggaccaactcaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctgtccgag
gacatcatgcgtctccgggagaagttgcaggaggagatgcttcagagggaggaagccgag
agcaccctgcagtctttcagacaggatgttgacaatgcttctttggcacgtctggacctg
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacacgatgag
gaaatccaggagctgcaggcccagattcaagaacagcacgtccagatcgatatggatgtt
tccaagcccgacctcacggctgccctgcgtgacgtccgccagcagtacgagagcgtggcc
gccaagaacctccaggaggctgaggagtggtacaagtccaagttcgctgacctctccgag
gctgctaaccgcaacaacgatgccctgcgccaggccaagcaggagtcgaacgagtaccgt
cggcaggtgcagtccctcacctgcgaggtggatgccctcaaaggcaccaacgagtctctg
gaacgccagatgcgtgaaatggaagagaacttttccgtggaagctgctaactaccaagac
actattggccgcctgcaggacgagattcagaacatgaaggaagagatggctcgtcacctg
cgtgaataccaagatctgctgaatgttaagatggctctcgacatcgagattgccacctac
aggaagctgctggaaggagaggagagcaggattgctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattcactccctctggttgacacccattcaaaaagg
acacttctgattaagacggttgaaaccagagatggacaggtcatcaacgaaacttcccag
catcacgatgacctggaataa
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