Lagenorhynchus albirostris (white-beaked dolphin): 132527457
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Entry
132527457 CDS
T10760
Symbol
SKIC2
Name
(RefSeq) superkiller complex protein 2 isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03018
RNA degradation
Brite
Enzymes [BR:
lalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132527457 (SKIC2)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132527457 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
132527457 (SKIC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132527457
NCBI-ProteinID:
XP_060019167
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All DBs
Position
10:complement(81176361..81186312)
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AA seq
1246 aa
AA seq
DB search
MMETERIVLPPPDPLDLPLRAVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKMDPWSLLATLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPVSQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE
KDLLTVPPGFKKGVDFAPQDHPAPAPGLLSLSRLLEPLDLGGGDEDESEAVGQPGGPRRD
TVSASPCSAPLARASSLENLVLQEASTAVAPPEPPKPPPQEQWAIPVDVTSPVDDFYRLI
PQPAFRWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VARPVPLEHHLFTGNSPKTQGELFLLLDSRGTFHTKGYYAAVEARKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSTRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQTLAELTKRLGALEEPDVTGQLVDLPDYYSYGEELTETRSLIQRRIIESVNGLKSLS
AGRVVIVKNQKHHNALGVILQVSSSSTSRVFTTLVLCDKPMSEDPQERGPASPSVPYPDD
LVGFRLFLPEGPCGHTVAKLQPGDVAAITTKVLRLNGEKILEDFSKRQQPKFKKEPPSAA
TTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEAGLRVRKLEELIRGAQCVHSPRF
PAQYLKLRERMQIQEEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEVGTVKLAGRV
ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPSDQLPSTLKQGVERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggagcgaatcgtgctacctcccccagatcctctggacctgccccttcgg
gccgtagagctgggatgcacagggcgttgggagctgctgaatgtgcctggggctccagag
agcacccttccccacggcctccctccctgtgccccagatctgcagcaagaagcagagcag
ttgtttctgtcatctcccgcctggctgcctctgcacggtgtggaacactcagcccgaaaa
tggcagaggaagatggatccttggtctctcctggccacattgggggccccagtcccctcc
gacctacaggcccaaagacacccaaccacaggccagatactaggctacaaggaggtcctg
ctagagaatacaaacctgtcagccacgacctccttgtctcttcgccggccacccgggccc
gtctcccagtccctgtgggggaatccaacacagtaccctttctggccagggggaatggat
gagcccaccataacagatctgagcactcgagaggaggctgaggaggagatagactttgag
aaagaccttcttactgttccacccggcttcaagaaaggcgtggactttgcaccacaggat
cacccagctccagctcccggcttgctcagcctcagccgtctgctggagcccctggatttg
ggtgggggcgatgaggatgagagtgaggcagtgggacagccaggcggtcccagacgggac
actgtttcagcctctccctgcagtgctcccctggcccgagcaagcagcttggagaaccta
gtgttgcaggaagcgtccacagctgtagctcccccagagcctcccaagcccccccctcag
gagcagtgggccattcctgtggatgtcacctcccctgtcgatgatttctaccgactcatt
ccccagccagccttccggtgggcgtttgagccagatgtgtttcagaaacaggccatccta
cacttggaacggcatgactcggtctttgttgcggctcacacatccgcagggaagacggtt
gtggctgaatacgccattgcccttgcccagaaacacatgacgcgcaccatctatacttcg
cccatcaaggctctgagcaaccagaagttccgggacttccgaaacacatttggggatgtg
ggacttctcaccggggacgtgcagctgcacccagaggcctcctgcctcattatgacaaca
gagatccttcgctccatgctgtacagtggctcggatgtcatccgagacctggagtgggtc
atctttgatgaggttcactacatcaacgatgctgagcgtggagtcgtgtgggaggaggtg
ctcatcatgcttcctgaccacgtctccatcatccttctgagcgctactgtccccaacgcc
cttgaatttgctgactggattgggaggctgaagcgtcgccagatctacgtgatcagcact
gttgctcgcccagtccccctggagcatcatctcttcacggggaacagccccaagacccag
ggggagctcttcctgctgctggactcccgaggcaccttccacacaaaggggtactacgcg
gctgtggaggccaggaaggagcggatgagcaaacacgcccagacctttggggccaagcag
cccacgcatcagggggggcctgcacaggaccgtggcgtgtacctgtccctcctggcctcc
ctccgcacccgtgcgcagctgcccgtggtggtgttcaccttctcccgtggccgctgtgat
gagcaggcctcgggcctcacctcccttgacctcaccacgagttcagagaagagtgagatt
cacctcttcctgcagcgctgcctcgctcgcctccgaggctctgaccgccagctgccccag
gttctgcacatgtctgaactcctgcaccgcggcctgggtgtgcaccacagcggcatcctg
cccatcctcaaggagatcgtggagatgcttttcagccgtggcctggtcaaggtcttgttt
gccacggagaccttcgccatgggtgtaaatatgccagcccggacagtggtgtttgactcc
acgcgtaagcacgatggctccaccttccgggacctgctccctggggagtatgtgcagatg
gcgggccgggcgggccggaggggcctggaccccacgggcaccgtcatcctgctctgcaag
ggccgtgtgcccgagatggcggacctgcaccgcatgatgatggggaagccgtcccagctg
cagtcccagttccgcctcacgtacaccatgatcctcaacctgctgcgggtggatgccctc
agggtggaggacatgatgaagaggagcttctctgagtttccatcccgcaaggacagtaag
gcccatgaacagactctggctgagctgaccaagcggctgggggccttggaggagcctgat
gtaactggccaactcgttgacctgcctgactattacagctacggggaggaactgacagag
acccggagcctgatccagcgacgcatcatagagtctgtgaatgggctgaaatctctctca
gcgggaagggtggtgattgtgaagaaccagaagcatcacaacgcactgggtgtgatcctt
caggtctcctcgagctccaccagcagagtattcacgactctggtcttgtgtgataagccc
atgtctgaggacccgcaggagagggggccagcctcccccagtgtgccctacccagatgac
ctcgtgggattcaggctgttcctgcctgaagggccgtgtggccacactgtggccaagctc
cagccaggagatgtggctgccatcaccaccaaggtgctccgactgaatggggagaagatc
ttggaggacttcagcaagaggcagcaaccaaaattcaagaaggagcctccctctgcggcc
acgacaactgctgtccaggaactactacgtctggctcaggcccacccagcaggaccccct
acccttgaccctgtcaatgacctgcagctcaaggatgtgtcggtggtagaggcggggctc
cgggtccggaagctggaggagctgatccggggggctcagtgtgtacacagtccccgtttc
cctgcccagtacctgaagctgcgggagcggatgcagatacaggaggagatggagcggctg
cgcttcctgctgtcggatcagtcgcttctgctgctccctgagtaccaccagcgagtagag
gtgctccgaaccctggggtacgtagatgaagtgggcaccgtgaagctggcagggcgggtg
gcttgtgccatgagcagccatgagctgctcctcactgaactcatgtttgacaacgcgctg
agcgcccttcggcccgaggagatcgcggccctgctctccggcctggtctgccagagcccc
ggggaccctagtgatcagctcccaagcacccttaaacagggggtggaacgtgtccgggct
gtggccaagcggatcggtgaggtgcaggtggcctgtggcttgaaccagacagtggaggaa
tttgtgggagagctgaattttggcctggtcgaggttgtgtacgagtgggcccggggcatg
cccttctctgagttggcagggctctcggggacccccgagggcctggtggtccgctgcatc
caacgcctggccgagatgtgtcgctcgcttcggggggcggcccgcctggtgggcgagcct
gtgctaggtgccaagatggagacggcagccaccctgctacggagggacatcgtctttgca
gccagcctctacacccagtga
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