Lagenorhynchus albirostris (white-beaked dolphin): 132527473
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Entry
132527473 CDS
T10760
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132527473 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lalb01007
]
132527473 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lalb03016
]
132527473 (VARS1)
Enzymes [BR:
lalb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
132527473 (VARS1)
Amino acid related enzymes [BR:
lalb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132527473 (VARS1)
Transfer RNA biogenesis [BR:
lalb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132527473 (VARS1)
Prokaryotic type
132527473 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Jag_N
GST_C_2
tRNA-synt_1e
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
132527473
NCBI-ProteinID:
XP_060019204
LinkDB
All DBs
Position
10:81315348..81329519
Genome browser
AA seq
1265 aa
AA seq
DB search
MSVLYVSPHPDAFPSLRALIAARYGEHGEGPGWGGAHPRICLQPPPTSRSPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALG
LRSSGQDPQAALAALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPSA
RRIWGNVTRWFITCVQQPEFRAVLGEVAVYSGARPLSQQPGSEVPAPPKTAAQLKKEAKK
REKLEKFQQKQKVQQQQPPPGEQKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDS
YSPQYVEAAWYPWWEQQGFFRPEYGRSSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLREVWKW
KEEKGDRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVQLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVLVATTRIE
TMLGDVAVAVHPKDPRYQHLKGKSVTHPFVPRSLPVIFDDFVDMEFGTGAVKITPAHDQN
DYEVGQRHGLEAISIMDAQGALVNVPPPFLGLPRFEARKAVLAALKERGLFRGTEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDW
CISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRTKAEALEKAAEEFGVSPDKIS
LQQDEDVLDTWFSSGLFPFSILGWPSQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLK
LTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEV
EKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKDFVPSPTSEPGGRGSLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWL
YELCDVYLECLKPVLSGVDQVAAEHARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRT
PQAPPSLCVTSYPEPSECSWKDPEAEGAFELALSITRAVRSLRADYNLTRIRPDCFLEVA
DEATGALASAVSGYVQTLASAGIVAVLALGASAPQGCAVALASDRCSVHLQLQGLVDPAR
ELGKLQAKRSEAQRQAQRLRERRAASGYTVKVPLKVQEADEAKLQQTEAELRKVDEAISL
FQKML
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttctctacgtctctcctcaccccgatgccttccccagcctccgagcccttata
gctgctcgctacggggagcatggggagggtccgggatggggaggagcccacccccgcatc
tgtctccagccgcccccgaccagcaggagtccctttccgccaccccgcctgcccgccctg
gaacaggggcccggtgggctctgggtgtggggggccactgctgtggcccagctgctgtgg
ccagcaggcctggggggccctgggggtagtcgggcagccgtcctcgtccaacagtgggtc
agttacgcagacacggagctgataccagctgcctgtggggcaacgctgccagccttggga
ctccgaagctctggccaggacccccaggctgcacttgcggccctgggcagggccctgagc
cccttggaagagtggcttcggctgcacacctacttggctggagaggcccccactctggct
gacctggcggctgtcacagctttgctgctgcctttccgttatgtcctggacccctctgcc
cgccggatttggggtaatgtcactcgctggtttatcacatgtgtccagcagccagaattc
cgggccgtgctgggagaggtggctgtgtattcaggggccaggcctctctcccaacagcca
ggctctgaggtccctgcacccccaaagacagctgctcaactcaagaaagaggcaaagaaa
cgggagaagctagagaaattccaacagaagcagaaggtccaacagcagcagccaccccct
ggggagcagaagaagccaaaaccagagaagagggagaaacgggatcctggggtcattacc
tatgacctcccaaccccacctggagaaaagaaagatgtcagtggcaccatgcctgactcc
tacagccctcagtatgtggaggctgcctggtacccttggtgggagcagcagggcttcttc
aggcccgagtatgggcgttccagtgtgtcagcaccaaatcctcggggcatcttcatgatg
tgcattccaccccccaacgtgacaggctctctgcacctgggccacgcgctcaccaacgcc
atccaggactccctgacccgatggcaccgcatgcgcggggagaccaccctgtggaatcct
ggctgtgaccacgcgggcattgccacccaggtggtggtggagaagaaactctggcgggag
caggggctgagtcggcaccagctgggccgagaggcctttctgcgggaggtctggaagtgg
aaggaggagaaaggtgaccggatttaccaccagctgaagaagcttggcagctccttggac
tggaatcgagcctgtttcaccatggatcctaaactgtcagcagccgtgacggaggccttt
gtccagctccatgaggaaggagtcatctaccgtagtacccgccttgtcaactggtcctgc
accctcaactctgccatctcagacatcgaggtggataagaaggagttgacaggccgcaca
ctgctctctgtgcctggctacaaggagaaggtggagtttggggtcctcgtctcctttgct
tacaaggtccaaggctcagacagcgacgaggaggtgctggtggcaacaactcggattgag
acgatgctgggagacgtggccgtagccgtgcaccccaaagaccccagataccagcacctg
aaggggaagagcgtgacccacccgttcgtgcctcggagcctccccgtcatcttcgatgat
tttgtggacatggagttcggcacaggcgcggtgaagatcacccctgcacacgaccagaat
gactatgaggttgggcagcggcatgggctggaggccatcagcatcatggacgcccaaggg
gcccttgtcaacgtgcccccacctttcctgggcctgcccaggtttgaggccagaaaggca
gtgttggcggcgctgaaggagcggggactgttccgtggcactgaggacaaccccatggtg
gtgccactttgcaaccgctccaaggatgtggtggagcctctcctgcggccgcagtggtac
gtgcgctgtggggagatggcccaggccgccagcgctgctgtgacacggggcgacctccgc
atcctgcccgaggcccatcaacgcacatggcatgcctggatggacaacatcagggactgg
tgcatctcccggcagctgtggtggggccatcgcattccagcctatttcgtcactgtcagt
gacccagctgtacccccaggggaggaccctgatgggcggtactgggtgagcgggcgcacc
aaggccgaggctctggagaaggcagccgaggagttcggagtgtccccggacaagatcagt
ctccagcaagatgaagacgtactggacacctggttctcctctggcctcttccccttctcc
atcctgggctggcccagccagtcagaagatctgagtgtgttctacccggggacgctgctg
gagacgggccacgatatcctcttcttctgggtggccaggatggtcatgcttggcctgaag
ctcactggcaggctacccttcagagaggtctacctccacgccatcgtgcgggatgcccac
ggccggaagatgagcaagtctctaggcaacgtcattgaccccctggacgttatccacgga
gtctccctgcagggcctccacgaccagttactgaacagcaacctggatcccagcgaggtg
gaaaaggctaaagaagggcagaaggcagatttcccggcggggatccctgagtgtggcacc
gatgctctccggtttggactgtgcgcctacacgtcccagggccgtgacatcaacctggat
gtgaaccggatattgggataccgccatttctgcaacaagctctggaacgccaccaagttt
gccctccgtggccttgggaaggattttgtgccctcacccacctctgagcctggaggccgc
gggagcctggtggaccgctggatccgcagccggctgaccgaagctgtgaggctcagcaac
cagggtttccaggcctacgacttcccagctgtcaccaccgcccagtacagcttctggctc
tacgagctctgtgatgtgtacctggagtgcctgaagcctgtgctgagtggggtggaccag
gtggcggccgagcacgcccgccagaccctctacacctgcctggacgtcggcctgcggctg
ctctcgcccttcatgccctttgtgaccgaggagctgttccagaggctgccccggcgcacg
ccacaagctccccctagcctctgcgttacctcctacccggagccctcggagtgctcctgg
aaggaccctgaggcggaaggcgccttcgagctggccctgagcatcactcgagccgtgcgc
tccctgcgtgccgactacaacctcacccggatccggcccgactgtttcctggaagtggct
gatgaggccacaggcgccctggcatcagcagtgtcgggctatgtgcagacgctggccagc
gcgggtatagtggctgtcctggcgctgggggcttctgcaccccagggctgcgctgtggcc
ctggcttctgaccgctgctctgtccacctgcagctgcagggcctggtagacccggcccgg
gagctgggcaaactgcaggccaagcgcagtgaggcacagcggcaggcccagcgtctacgg
gaacgccgcgctgcctcgggctacactgtcaaggtgcccctcaaagtccaggaggcagat
gaagccaagctccagcagacagaagcagagctcaggaaggtcgatgaggccatctcccta
tttcagaagatgctgtga
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integrated database retrieval system
