KEGG   Lagenorhynchus albirostris (white-beaked dolphin): 132527524
Entry
132527524         CDS       T10760                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
lalb  Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:lalb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lalb03400]
    132527524 (MDC1)
DNA repair and recombination proteins [BR:lalb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    132527524 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 132527524
NCBI-ProteinID: XP_060019349
LinkDB
Position
10:81902436..81916076
AA seq 2042 aa
MLGATTMIMEDTQVINWEVEQEEEVEERPSESLGCSLEPLGRLRIFSSSYGPEKDFPLYL
GKNVVGRMPDCSVALPYSSISKQHAVIEILAWDKAPVLRDCGSLNGTQILRPPKVLGPGV
SHRLRDRELILFADLPCQYHRLDVPLPFVSRGPLTIEETPRVQGGTQPHRLLLAEDSEEE
VDSLSEKCVVKGPRTSFLATVVPESDEEGPSSALDVPGPPFAFNLNSDTDEEESQQPGAG
EGSSAARRVTAAETEQPKPVTTGIQLEKDQCSVKEKNNDTKVERSARSRVVPVGVTLERS
QPAGEDSDTDVDDERGPLRRLTGVHLERAQPCGFIDSDTDVEEEGIPATPAVVPVRKRHI
FHEVGTESPRAPGVAHQQESPAGSDTDIEEGEAPLAVPLDKSRASVVIDSNTDGKGEVSA
ALTLAHLRGSRAAAWNRDPGAEDDRAQPVALLEQSQASAGRDSDTDVKEKGLPVEKTGTV
PRGHTGKAYSEKSHPPLRDSDTEVAEEKSSPGFHLERSQASATVHINTQVVEEVPPRPAV
ILLEKHQVPVAWTHQTDVEAEGGPAKLPVVYPEEAQPPLAGDCDPDAEENTSLAASAVAD
VRKSQLQAEEDTGTEWAVAVLEQGRAFMAGAQGGSPAAQVEQDLLPVSRNNIADLVVDTG
TPGEPTQPQRQGAQTPTEGEREPHVDKTMDSGDNHDDSEDLDLQATQCFVERENQSLEVS
SMEDEPTQAFLFTLPQEPGPSHCSFQATGSLDEPWEVLATQPFCPRESEASETQPIATHI
EAHASCPSPPTAAPQEQHPESPVHAEPLGIQGRGMQTVEEDMGTPRETAERVTPERGPLE
RETEKLPSEGEREDVMGEEESTRGIQDREQKQVLARDTQKQESDKKVKSASTERDMESLK
VEIETPEEIQEKEREKQTLTREIFDREAEKPVAERECEAGGLQGKVPKVMLDRGPQTGET
EAGGQDQKGQASGSTPEPGAGAGDLQGLASDPIASGSQSGGGRGAPVSPRRQQRGYLNCK
MPPAEKASRGDQESPDACRPPALQEASAPLQNPLISQSQKHPAPQSLLSPSPPPLEPPIP
RTRQNESQEALETPFSSELDSLHPKPKVKPQGSSPVSSVPLEPHPTASTDQLVTPKPTSR
ATRGRTLRSSVKTPEQNVSTAPELQASAHTDQAVTPKPTSRATRGRTQRASVKTPKPVIS
TAPEPQPSTPTDQPVTPKLTSRATRGRTQRASVKTPKPVIATAPAPQPSTPTDQPVTPEP
TSQATRGRTQRASVKAPEPVISTAPEPQPSTPTDQPVTPKPTSRATRGRTQRASVKTPEP
VISTAPEPQPSTPTDPPVTPKPTSRATRDRTQRASVKTPEPVISTAPEPQPSTPTDQPVT
PKPTSRATWGRTQRASVKAPEPVISTAPEPQPSTPTDQPVIPKPTSRATRGRTQRASVKT
PEPVIATAPAPQPSTPTDQPVTPEPTSQATRGRTQRASVKTPEPVISTAPEPQPSTPTDQ
PVTPKPTSRATRGRTLRSSVKTPEQNVPTAPELQPSAHTDQPVTPKPTSRAPQGRTLRSS
AKAPEPVVPITPEPQPSTSKDQSLTPEPTSQATRGRTQRSSVKTSQPTEPTAPDLEPSSP
TEQPVTPKVIAQGGQSRTLRSSTVSAVPVPAAPESHSPVPTGEPVPPEPMPEANCSRRPG
ATRKHGSLTAHVHEPYSAPSEPNSQSSRNQRRGAVRAAESLSTIPEPAFAQLPEAPTRAP
QIPKGEAADRSGFTPEPQPEASQNRKRPLATADSPPLQKRLQREAPQKTAFLKEEEENPA
AKLRKEEDVVIPGPGKRKREQTEEEPREIPSRSLRRTKPLQESTAPKVLFTGVVDAHGER
AVLALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLRQSHKAGCFLPPAE
YVVADPEQEKNFGFSLREALSRARERRLLEGYEIHVTPGVQPPPPQMGEIISCCGGTVLP
SMPRSYKPQRVVITCSQDFPRCAIPFRVGLPILSPEFLLTGVLKQEAKPEAFVLSSLEVS
ST
NT seq 6129 nt   +upstreamnt  +downstreamnt
atgcttggggcgacgactatgatcatggaagacacccaggttattaactgggaagttgaa
caagaggaggaggttgaagagagacccagtgaatctttggggtgtagcctggagcccctt
gggcgactgcgtatcttcagtagttcctatggaccagaaaaagatttcccactatacctt
gggaagaatgtggtaggccgaatgcctgattgctctgtggccctgccctattcatctatc
tccaaacaacatgcggtgattgaaatcttggcctgggacaaggcgcctgtcctccgggat
tgtggaagcctcaatggtactcaaatcctgaggcctcctaaggtcctgggccctggggtg
agtcatcgtttgagggaccgggagttgattctctttgctgacttgccctgccagtaccat
cgcttggatgtccccctgccctttgtctcccggggccctctaactatagaggagacaccc
agggtacagggaggaactcaaccccacaggcttctgttggctgaggactcagaggaagaa
gtagattctctttctgaaaagtgtgtggtgaaaggaccaaggacctcctttttggcaaca
gtagttccagagagcgatgaagagggaccttcctctgccctggatgtccctgggccacct
tttgccttcaacttgaacagtgacacagatgaggaagaaagtcagcaaccaggagcaggg
gagggctcctcagctgccagaagagtcaccgctgcagagacagaacagcctaaacctgtc
acaactggaatccagcttgaaaaggatcagtgttcagtgaaggagaagaacaatgacacg
aaagttgagaggagcgcgaggagtagggtggttccagttggagtgactctggagaggagc
cagcctgctggggaggacagtgacacagatgtggacgatgagcgcgggcctctgagaagg
ctcactggggtccatctggaaagggcccagccttgtggcttcatagacagtgatactgat
gtggaagaagaggggatccctgcgaccccagctgtagttcctgtgaggaagaggcacatc
ttccatgaagttggtacagagagtcctcgggcacctggcgtggcacatcagcaggagagc
ccggctggtagtgatacagatatagaggagggggaggcccccctggctgtccctctggac
aaaagccgagcctccgtcgtgatcgatagcaatacagatggcaagggggaagtctcagca
gcgctcacactggcacatctaagagggagccgggccgctgcgtggaacagagatccaggg
gcagaagacgatagggcccaaccggtggcccttctggagcaaagccaagcctctgctggg
agagacagtgacacagacgtgaaggaaaaggggctcccagtggagaagacaggaactgtt
cccaggggtcacacgggcaaggcatattcagaaaagagtcatcctcctctcagggacagt
gatacagaggtggcggaagagaagagctcaccagggttccacctggagagaagccaagcc
tctgccacagtgcatatcaacacacaagtggtggaggaagtcccaccacggccagctgtt
atacttctggagaagcatcaagtacctgtagcatggacacatcaaacagatgtggaagct
gaaggaggcccagcaaagctgcctgtggtgtatccagaagaagcccagcctcctctcgct
ggggactgtgacccagatgcggaggagaacacatccttagcagcctcagcagtggcagat
gtaagaaagagccagcttcaggcagaagaagatactgggacagagtgggctgtagccgtt
cttgaacagggcagggcttttatggctggggcccagggtgggtcacccgcggcccaagtg
gagcaggaccttctccctgtctcaaggaataacatagcagatctggtggtggacacaggc
actccaggggaacccacccagccacagagacagggggcccagacccccacagaaggggag
agagaaccacatgtggataagaccatggactctggagacaaccacgatgattctgaagat
ctggacctgcaagctacccagtgctttgtggagagagagaatcagagcctggaagtctcc
agcatggaggatgaacccacccaggccttcctgtttactctgccccaagagcctggccct
tcccattgcagcttccaggccacaggttccttggatgagccatgggaggtcttggctaca
cagccattctgtccgagagagtctgaagcctctgagacccagcccattgccacccacatt
gaagcccatgcatcttgcccctctccacctacggcagcaccacaagagcaacatccagag
agtccagttcatgcagagccactggggattcaaggcagagggatgcagactgtggaggaa
gacatgggtacaccaagagagacagcagagagggtgacccctgagagagggccattggag
agggaaactgagaaactgccctcggaaggagagagggaagatgtgatgggagaggaagaa
tcaacgagggggatacaggacagagaacaaaaacaggtgttagctagagatactcagaaa
caagagtctgacaaaaaagtaaaaagtgcaagtactgaaagggatatggagagtttgaag
gtagaaattgagacacccgaggaaatacaagagaaagagagagaaaagcagactcttaca
agagaaatatttgacagagaagcagagaaaccagtagcagagagagagtgtgaggcaggt
gggttacaagggaaggtacccaaagtgatgctggacagaggcccacagacaggggagaca
gaagcggggggccaggaccagaaaggccaggcctcaggttcgacaccagagcctggagcg
ggggcgggagaccttcagggacttgcttcagaccccatagcttctgggagccagtcaggt
ggaggaaggggtgccccagtgagccccaggaggcagcagagaggctacttgaattgcaag
atgccacctgctgagaaggcttccaggggtgatcaggaatccccagatgcttgtcggcct
cctgcactgcaggaggcttcagcgcctctccaaaaccccctcatctctcagagccagaaa
catcctgcccctcagtccctcctttcgccctctccacctcctttagaaccgcccattccc
aggaccagacaaaatgagagtcaggaagctctggagactcccttttcctcagagctggac
tctcttcacccaaaacccaaagtcaagccccaagggtcctctccagtttcttctgtaccc
cttgagccccaccctaccgcctccacagaccagcttgtcacccccaagcccacatctcgg
gccactcggggcaggacacttaggtcctctgtcaaaacccctgaacaaaatgtctccaca
gcccctgagctccaggcttctgcccacacagaccaggctgtcacccccaaacccacatct
cgggccactcggggcaggacacagagggcttctgtcaagactcccaaaccagttatctcc
acagcccctgagccccagccttccactcccacagaccagcctgtcacccccaaactcaca
tctcgggccactcggggcaggacacagagggcttctgtcaagactcccaaaccagttatc
gccacagcccctgcgccccagccttccactcccacagaccagcctgtcacccccgaaccc
acatctcaggccactcggggccggacacagagggcttctgtcaaggctcccgaaccagtt
atctccacagcccctgagccccagccttccactcccacagaccagcctgtcacccccaaa
cccacatctcgggccactcggggcaggacacagagggcttctgtcaagactcccgaacca
gttatctccacagcccctgagccccagccttccactcccacagacccgcctgtcaccccc
aaacccacatctcgggccactcgggacaggacacagagggcttctgtcaagactcccgaa
ccagttatctccacagcccctgagccccagccttccactcccacagaccaacctgtcacc
cccaaacccacatctcgggccacttggggcaggacacagagggcttctgtcaaggctccc
gaaccagttatctccacagcccctgagccccagccttccactcccacagaccagcctgtc
atccccaaacccacatctcgggccactcggggcaggacacagagggcttctgtcaagact
cccgaaccagttatcgccacagcccctgcgccccagccttccactcccacagaccagcct
gtcacccccgaacccacatctcaggccactcggggcaggacacagagggcttctgtcaag
actcccgaaccagttatctccacagcccctgagccccagccttccactcccacagaccag
cctgtcacccccaaacccacatctcgggccactcggggcaggacacttaggtcctctgtc
aaaacccctgaacaaaatgtccccacagcccctgagctccagccttctgcccacacagac
cagcctgtcacccccaaacccacatctcgggcccctcagggcaggacacttaggtcatct
gctaaggcccctgaaccagttgtccccataactcctgagccccagccttccacctctaaa
gaccagtctctcacccctgagcccacatctcaggccactcggggcaggacacaaaggtcc
tctgtcaagacatcccagccaactgaacccacagctcctgaccttgaaccttcgtccccc
acagagcagcctgtcacccccaaagtcatagctcagggtggtcagagcaggacactaagg
tcttctacagtaagtgctgtgccagttcctgccgcccctgaatcccactctccagtgccc
acaggagagcctgttccccctgagcccatgcctgaagccaattgcagcaggaggccaggg
gccactaggaaacatgggtctctcacagctcacgttcatgaaccctactctgcaccctcc
gaacctaactcccagtcttcaaggaaccagagacgaggggcagtgagagcagccgagtcc
cttagcaccattcctgagcctgcctttgcccagcttcccgaggcacccactcgtgctccc
cagatcccaaagggggaggcagcagatagatctggcttcaccccagagccccagcctgag
gcctctcaaaatcgcaagaggcctttagctactgcggactcacctccacttcaaaaacgg
ctccaaagagaagctccccagaagacagcattcctcaaggaagaagaagaaaatcctgca
gcgaagctgaggaaggaagaggatgtagtgattccaggaccaggcaagagaaagagagag
cagacagaggaggagccccgggaaataccaagccgcagcctgcgacggaccaaacctctc
caagagtccacggcccccaaagtgctcttcacaggcgtggtggatgctcatggagagcgg
gcagtgctggccctggggggcagtctggccagctcagtggctgaggcttcccacctggtg
acagatcggatccgccggacagtcaagttcctgtgtgccctggggcggggcatccccatc
ctctccctggactggctgcgccagtcccacaaggcaggttgcttcttgcccccggctgaa
tatgtggtggctgatcctgagcaggagaagaactttggcttcagccttcgggaggccctg
agccgggctcgggagcgaaggctgctggagggctacgagattcacgtgaccccaggagtc
cagccaccaccacctcagatgggagagatcatcagctgctgtggaggcaccgtcctaccc
agcatgccccggtcctataagcctcagagagttgtgatcacatgttcccaggacttccct
cgatgtgccattccatttcgggttgggctgcccatcctctcacctgagttcctgctcaca
ggagtactaaagcaggaagccaagccagaggcctttgtcctctccagtttggaagtgtca
tccacctga

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