KEGG   Lagenorhynchus albirostris (white-beaked dolphin): 132527924
Entry
132527924         CDS       T10760                                 
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
lalb  Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03018  RNA degradation
lalb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lalb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132527924 (LSM2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132527924 (LSM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lalb03019]
    132527924 (LSM2)
   03041 Spliceosome [BR:lalb03041]
    132527924 (LSM2)
Messenger RNA biogenesis [BR:lalb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     132527924 (LSM2)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     132527924 (LSM2)
Spliceosome [BR:lalb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    132527924 (LSM2)
 Complex C
  U2 snRNP components
    132527924 (LSM2)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 132527924
NCBI-ProteinID: XP_060019918
LinkDB
Position
10:81308352..81314607
AA seq 210 aa
MSLTGALPDARAAAGARACAVGACHSGRKSEGGKLRPFPGFGVPLGSIPPHPPRAASPRG
AVLHPSELSAALPAAPARPRPAPRAGSRSSCRQAFGPPHPALALLVQRAPSGASTMLFYS
FFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGS
VVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atgtcacttacaggcgccctccccgacgctcgtgcagcggctggggcccgcgcctgcgcg
gtgggagcctgccactccgggaggaagtcggaaggcgggaagctccgcccctttcccggc
tttggcgttcccctcggctctatccccccccaccctccccgagccgcgagcccgcggggc
gctgtcctccacccctcggagctctccgcggcgcttcccgcagcgcctgcgcgaccccgc
cccgccccacgcgcgggttcgcgttccagttgccgccaggccttcggtccaccgcacccg
gccctcgctctcctggtccagcgggcgcccagcggcgcaagcaccatgctcttctattcc
tttttcaagtcccttgtgggcaaggatgtggtcgtggaactcaagaatgacctgagcatc
tgtggaaccctccattctgtggatcagtatctcaacatcaaactaactgacatcagtgtc
acagaccctgagaaataccctcacatgttatcagtgaagaactgcttcatccggggctca
gtagttcgctatgtgcagctgccagcagatgaggtcgacacacagttgctacaggatgcg
gcaaggaaggaggccctgcagcagaagcagtga

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