Lagenorhynchus albirostris (white-beaked dolphin): 132528940
Help
Entry
132528940 CDS
T10760
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
132528940 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lalb03036
]
132528940 (DICER1)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132528940 (DICER1)
microRNA pathway
RISC loading complex
132528940 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
Amidoligase_2
UPF0257
Motif
Other DBs
NCBI-GeneID:
132528940
NCBI-ProteinID:
XP_060021126
LinkDB
All DBs
Position
1:9600866..9668128
Genome browser
AA seq
1921 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD
IEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAGDAGV
GVRSLPADFRYPNLDFGWKKSIDSKSFISVANSSSAENENHCKHSTVVVLENAARQGANR
TSCLENHDQMSVNCRTLFESPGKLQIEVSTDLTAINGLSYNKNLANGSYDLANRDFCQGN
HLSYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANKSTSDGSPTMAA
VPGTTETGKALTDRTASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNTEKWEKDEITKDCMLANGKLDDDFEEEEEGGGLTWGAPKEDADDEED
FLEYDQEHIKFIDSMLMGSGAFVKKISLSAFSATDSAYEWKMPKKSSLGGIPFSSDFEDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGSR
AAASGAGPRSSVLKDVEYGCLEIPPRCMFDHPDADRTLSHLISGFENFEKKINYRFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacc
atagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagacttcaacagaaatggcaaaaggacggtgttcttggtc
aactctgcaaaccaggtagctcaacaagtgtcagctgtcagaactcactcagatctcaag
gttggggaatactcaaacctggaagtaagtgcatcttggacaaaagagaaatggaaccaa
gagtttactaagcaccaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactatcagacattaaccttttggtgttcgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctctgtgaaaattgtccatcatgtcct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacttg
gtggtcttagacagatatacttctcagccatgtgagattgtggtagactgtggaccattt
actgacagaagtgggctttatgaaagactgctgatggaattagaagaagcacttaatttt
atcaatgactgtaacatatctgtacattcaaaagaaagagattctactttaatttctaaa
cagatactctcagactgtcgtgcggtattggtagttctgggaccctggtgtgcagataaa
gtagctggaatgatggtaagagaactacagaaatatatcaaacacgaacaagaggagctg
cacaggaaatttctattgtttacagacactttcctaaggaaaatccatgcactatgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaactccgaaagtaataaaactg
cttgaaatcttacgcaaatataaaccgtatgagcgacagcagtttgaaagcgttgagtgg
tataataataggaatcaggataattacgtgtcttggagtgattctgaggatgatgaagag
gatgaagaaattgaagaaaaagaaaagccagagacaaattttccttctccatttaccaat
attttgtgtggaattatttttgtggaaagaagatatacagcagttgtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcattggaaagaatcagcctcgcaacaaacagatggaagcggaattcagaaag
caggaagaggtacttaggaaatttcgagcacatgaaaccaacctgcttattgcaacaagt
attgtggaggagggtgttgacataccgaaatgcaacttggtggttcgttttgatctgccc
acagagtatcgatcctatgttcaatctaagggaagagcgagggcaccgatctctaattat
gtaatgttagcagatacagacaaaataaaaagttttgaagaggaccttaaaacatacaaa
gctattgaaaagatcttgagaaacaaatgttccaagtcagttgatactggtgagactgac
attgagcctgttgtggatgatgatgatgttttcccaccatatgtgttgaggcccgatgat
ggtggtccacgagtcacaatcaacacggccattgggcacatcaatagatactgtgctaga
ttaccaagtgatccgtttactcacctggctcctaaatgtagaacccgagagttgcctgat
ggtacattttattcaactctttatctgccaattaactcacctcttcgagcctccattgtt
ggtcccccaatgagctgtatacgattggctgaaagagtcgtagctctcatttgctgtgaa
aaactgcacaaaattggcgaactggatgaccatttgatgccagttgggaaagagactgtt
aaatacgaagaagagcttgatttacatgacgaagaagagaccagtgttccaggaagacca
ggctccacaaaacgaagacagtgctacccaaaagcgattccagaatgtttgagggatagc
taccccaagcccgatcagccttgttacctgtatgtgataggaatggttctaacgacacct
ttacctgatgaactcaactttagaaggcggaagctttatccccctgaggataccacaaga
tgctttggaatactgacagccaaacccatacctcagattccgcactttcctgtgtacaca
cgctctggagaggttaccatatctattgagttgaagaagtctggtttcacgttatctcta
caaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcggctt
gaaaaacctgcactagaatttaaacccacagacgctgactcagcatactgtgttctacct
cttaatgttgttaatgactccagcactttggacattgactttaaattcatggaagatatc
gagaagtctgaagctcgcataggcattcccagtacaaagtattcaaaagaaactcccttt
gtttttaaattagaagattaccaagatgcagttatcattccaagataccgcaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttacccccctgagtaaattt
ccttcccctgaatatgaaacttttgcagaatattataaaacaaagtataaccttgacctg
accaatctcaaccagccgctgctggatgtggaccacacatcttcaagactgaatcttctg
acacctcgccatttgaatcagaaggggaaagctcttcctctaagcagtgctgaaaagagg
aaagccaaatgggaaagtctgcagaataaacagatactggttccagaactctgtgctata
catccaattccagcatcactgtggagaaaagcggtttgtctccccagcatactttatcgc
cttcactgccttttgactgcagaggagctaagagcgcagacagccggcgacgctggtgtg
ggagtgaggtcactgcccgcggattttagataccccaacttagacttcgggtggaaaaaa
tctattgacagcaaatctttcatctcagttgctaactcctcttcagctgaaaatgagaat
cactgtaagcacagcacagttgtcgtccttgaaaatgctgcacgtcaaggtgctaataga
acctcctgtctagaaaatcacgaccaaatgtctgtgaactgcagaacgttgttcgagtca
cctggtaagctccaaattgaagtttcaacagatctgacagcaattaatggtctttcttac
aataaaaatctcgccaatggcagttacgatttagctaacagagacttttgccaaggaaac
catctgagttactacaagcaggaaatacctgtacaaccaactacctcatatcccattcag
aatttatacaattatgagaaccagcccaagcccagcgatgaatgtactctactgagtaat
aaataccttgatggaaatgctaacaaatctacctcagatggaagtcccacgatggccgcc
gtgcctggtactacagagactggtaaggcgctcacggacaggacggcttctgagcagagc
ccttctcccgggtactcctcgagaacgcttggcccaaaccctggacttattcttcaggct
ttgaccctttcaaatgctagtgatggatttaacctggagcggctcgaaatgcttggcgac
tccttcctaaagcatgccatcaccacgtatctcttttgcacttaccccgatgctcacgag
ggccgcctttcctatatgagaagcaaaaaggtcagcaactgtaatctgtatcggcttgga
aaaaagaaggggctgcccagccgcatggtggtgtcaatatttgatccccctgtgaattgg
cttcctcctggttatgtagtaaatcaagacaaaagtaacacagagaaatgggaaaaagat
gaaataacaaaagactgcatgttggctaatggcaagctggacgatgacttcgaagaggag
gaggagggggggggcctgacgtggggggctccgaaggaggacgccgacgacgaggaggac
ttcctggagtacgaccaggagcacatcaagttcatagacagcatgctgatgggatccgga
gcttttgtcaagaaaatctcgctttctgctttttcagccactgattccgcctatgaatgg
aaaatgcccaaaaaatcctccttaggtggtataccgttttcatcagattttgaggatttt
gactatagctcttgggatgcaatgtgctatctggatcctagcaaagctgttgaagaggat
gactttgtggtggggttctggaatccatcagaagaaaactgtggtgttgacacagggaaa
cagtccatttcttacgacctgcacaccgagcagtgcattgctgacaaaagcatagccgac
tgtgtggaagccctgctgggctgctatttaaccagctgtggcgagagggctgctcagctt
ttcctctgttcgctggggctgaaggtgctcccggtaattaagaggactgatcgggaaaag
gccatgtgcccgaccagggagaatttcaccagccaacaaaagaacctttcagggagccgc
gctgccgcctctggagctggcccccgctcctccgtgttgaaagacgtggagtatgggtgt
ttggagatcccgccgaggtgcatgtttgatcacccagatgcagataggacactgagtcac
cttatctcggggtttgaaaatttcgaaaagaaaatcaactacagattcaagaataaggct
tacctactacaggcttttacacacgcctcctaccactacaacactatcactgattgttac
cagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctttat
gaagacccacggcagcactccccaggggtcctgactgacctgcgctcggctctggtcaac
aacaccatctttgcatcattggctgtgaagtatgactaccacaagtactttaaagcagtt
tctcctgagctcttccacgtcatcgatgattttgtgcagtttcagctcgagaagaatgaa
atgcaagggatggattctgagcttaggagatctgaggaggatgaagagaaggaagaggat
attgaagttccaaaggccatgggggatattttcgagtcgcttgctggtgccatttacatg
gatagcgggatgtcgctggagatggtttggcaggtgtactatcctatgatgcggccgctg
atagaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatggaa
ccagaaaccgccaaatttagcccggctgagagaacttacgatggcaaggtcagagtcacc
gtggaagtagtaggaaaggggaaattcaaaggtgttggccgaagttacaggattgccaaa
tctgcagcggcaagaagagccctacgaagcctcaaagctaatcaacctcaggttcccaac
agctga
DBGET
integrated database retrieval system
