Lagenorhynchus albirostris (white-beaked dolphin): 132529071
Help
Entry
132529071 CDS
T10760
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lalb03000
]
132529071 (SOX5)
Transcription factors [BR:
lalb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132529071 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132529071
NCBI-ProteinID:
XP_060021301
LinkDB
All DBs
Position
11:84643261..85606647
Genome browser
AA seq
716 aa
AA seq
DB search
MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHEVDGNKVMSSFAPHNSST
SPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKL
LSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAA
SQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQ
RTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLA
AMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGK
SPTSPTSPHMPALRINSGAGPLKASVPASLASPSARVSTIGYLNDHDAVTKAIQEARQMK
EQLRREQQVLDGKVAVVNSLGLNNCRAEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNM
SGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS
KILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKA
IMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMP
VIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYEEEEDDPDVDYGSDSENHIAGQAN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcgaccagcctctccgtatggggaagcagatggagaggtagccatggtg
acaagcagacagaaagtggaagaagaggagagtgacgggctcccagcctttcaccttccc
ttgcatgaagttgatggcaataaagttatgtcttcatttgccccacacaactcatctacc
tcacctcagaaggcagaagaaggtgggcgacagagtggcgagtccttgtctagtacagcc
ctggggactcctgagcggcgcaaaggcagcttagctgatgttgttgacaccttgaagcag
aggaagatggaagagctcatcaaaaatgagccagaagaaacccccagtattgaaaagcta
ctatcaaaggactggaaagacaagcttcttgcaatgggatcagggaactttggtgaaata
aaagggactcccgaaagcctcgctgagaaggagagacagctcatggggatgatcaatcag
ctaaccagtctgcgagagcagctgctggctgcccatgatgagcagaagaaactggctgca
tctcagattgagaaacagcgccagcaaatggagctggccaagcagcagcaagaacagatt
gcaagacaacagcagcagcttctgcagcaacaacacaaaatcaatttgcttcagcaacag
atccagcaggttcaaggtcaactgccgccattaatgattcctgtattccctcccgatcaa
cggacactggctgcagctgcccagcaaggattcctccttcctccaggcttcagctataag
gctggatgtagtgacccttaccctgtacagctgatcccaactaccatggcagctgctgct
gcagcaacaccaggcttaggcccactccaactgcagcagttatatgctgcccagctagct
gcaatgcaggtatctccaggaggaaagctcccaggcataccccaaggcaaccttggtgct
gctgtatctcctaccagcattcacacagacaagagcacaaacagcccaccacccaaaagc
aaggatgaagtggcacagccactgaacctatcagctaaacccaagacctctgatggcaaa
tcacccacatcacccacctctccccatatgccagctctgagaataaacagtggggcaggc
cccctcaaagcctctgtcccagcatcattagctagtccttcagccagagttagcacaata
ggttatttaaatgaccatgatgctgtcaccaaggcaatccaagaagctcggcagatgaag
gagcagcttcggcgggaacaacaggtgcttgatgggaaggtggctgttgtgaatagtcta
ggtctcaataactgccgagcagaaaaggaaaaaacaacactggagagtctgactcagcaa
ctggcagttaaacagaatgaagaaggaaaatttagccatgccatgatggatttcaatatg
agtggagattctgatggaagtgctggagtctcagaatcaagaatttatagagaatccagg
gggcgtggtagcaatgaaccccacataaagcgtccaatgaatgccttcatggtgtgggct
aaagatgaacgaaggaaaatccttcaggcctttcctgacatgcacaattccaacatcagc
aagatactgggatctcgctggaaagctatgacaaacctagagaaacagccatattatgag
gagcaagcccgtctcagcaagcagcacctggagaagtaccctgactacaaatacaagccc
aggccgaagcgcacctgcctggtggatggcaaaaagctgcgcatcggggaatacaaggca
atcatgcggaacaggcggcaggaaatgcggcaatacttcaacgttgggcaacaagcacag
atccccatcgccactgctggtgtcgtgtaccctggagccatcgccatggctggaatgccc
tcccctcatctgccctcagagcactcaagcgtgtccagcagcccggagcctgggatgcct
gttatccagagcacttacggcgtgaaaggagaggagccacatatcaaagaagagatccag
gctgaggacatcaacggagaaatttatgatgagtacgaggaggaagaggatgatccagat
gtagattatgggagtgacagtgaaaaccatattgcaggacaagccaactga
DBGET
integrated database retrieval system
